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SummaryGeometryRelated PDB entries

OAM

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAACABsing1.51Å1.53Å
CABNACdoub1.30Å1.34ÅAromatic
CABNAMsing1.36Å1.32ÅAromatic
NACNADsing1.29Å1.26ÅAromatic
NADCAEdoub1.32Å1.35ÅAromatic
CAECAFsing1.48Å1.42ÅAromatic
CAENAMsing1.37Å1.35ÅAromatic
CAFCAGsing1.41Å1.34ÅAromatic
CAFCAKdoub1.39Å1.40ÅAromatic
CAGNAHdoub1.30Å1.35ÅAromatic
NAHNAIsing1.40Å1.25ÅAromatic
NAICAJsing1.47Å1.52Å
NAICAKsing1.35Å1.33ÅAromatic
CAKNALsing1.39Å1.33Å
NAMCANsing1.47Å1.48Å
CANCAOsing1.53Å1.53Å
CAOCAPsing1.53Å1.53Å
CAPNAQsing1.46Å1.47Å
NAQCARsing1.37Å1.33ÅAromatic
NAQCAUsing1.35Å1.34ÅAromatic
CARCASdoub1.35Å1.34ÅAromatic
CASNATsing1.34Å1.34ÅAromatic
NATCAUdoub1.31Å1.34ÅAromatic
CAAHAAsing1.09Å1.10Å
CAAHAAAsing1.09Å1.10Å
CAAHAABsing1.09Å1.10Å
CAGHAGsing1.08Å1.08Å
CAJHAJsing1.09Å1.10Å
CAJHAJAsing1.09Å1.10Å
CAJHAJBsing1.09Å1.10Å
NALHNALsing0.97Å1.00Å
NALHNAAsing0.97Å1.00Å
CANHANsing1.09Å1.10Å
CANHANAsing1.09Å1.10Å
CAOHAOsing1.09Å1.10Å
CAOHAOAsing1.09Å1.10Å
CAPHAPsing1.09Å1.10Å
CAPHAPAsing1.09Å1.10Å
CARHARsing1.08Å1.08Å
CASHASsing1.08Å1.08Å
CAUHAUsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAACABNAC128.4°126.3°
CAACABNAM123.5°126.3°
CABCAAHAA109.5°109.4°
CABCAAHAAA109.5°109.5°
CABCAAHAAB109.5°109.5°
NACCABNAM108.1°107.4°
CABNACNAD107.5°110.1°
CABNAMCAE108.1°105.7°
CABNAMCAN124.7°127.2°
NACNADCAE111.7°109.8°
NADCAECAF129.9°126.6°
NADCAENAM104.6°106.9°
CAFCAENAM125.5°126.5°
CAECAFCAG129.2°126.4°
CAECAFCAK127.0°126.4°
CAENAMCAN127.2°127.1°
CAGCAFCAK103.6°107.1°
CAFCAGNAH109.2°108.3°
CAFCAGHAG125.4°125.9°
CAFCAKNAI107.5°107.2°
CAFCAKNAL127.1°126.4°
CAGNAHNAI109.4°109.0°
NAHCAGHAG125.4°125.9°
NAHNAICAJ124.3°125.8°
NAHNAICAK110.3°108.4°
CAJNAICAK125.4°125.8°
NAICAJHAJ109.5°109.5°
NAICAJHAJA109.5°109.4°
NAICAJHAJB109.5°109.5°
NAICAKNAL125.4°126.5°
CAKNALHNAL109.5°120.1°
CAKNALHNAA109.5°120.0°
NAMCANCAO117.4°109.5°
NAMCANHAN106.9°109.5°
NAMCANHANA106.9°109.5°
CANCAOCAP108.8°109.5°
CAOCANHAN106.9°109.5°
CAOCANHANA106.9°109.4°
CANCAOHAO109.7°109.5°
CANCAOHAOA109.7°109.4°
CAOCAPNAQ114.6°109.5°
CAPCAOHAO109.7°109.5°
CAPCAOHAOA109.7°109.4°
CAOCAPHAP107.8°109.4°
CAOCAPHAPA107.8°109.5°
CAPNAQCAR125.1°126.5°
CAPNAQCAU124.3°126.3°
NAQCAPHAP107.8°109.5°
NAQCAPHAPA107.8°109.5°
CARNAQCAU110.5°107.2°
NAQCARCAS105.9°106.9°
NAQCARHAR127.1°126.5°
NAQCAUNAT106.2°108.7°
NAQCAUHAU126.9°125.7°
CARCASNAT109.2°108.0°
CASCARHAR127.1°126.6°
CARCASHAS125.4°126.0°
CASNATCAU108.2°109.3°
NATCASHAS125.4°126.0°
NATCAUHAU126.9°125.6°
HAACAAHAAA109.5°109.4°
HAACAAHAAB109.5°109.5°
HAAACAAHAAB109.5°109.5°
HAJCAJHAJA109.4°109.5°
HAJCAJHAJB109.5°109.5°
HAJACAJHAJB109.5°109.5°
HNALNALHNAA109.5°120.0°
HANCANHANA111.9°109.5°
HAOCAOHAOA109.3°109.5°
HAPCAPHAPA111.1°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAACABNACNAM179.5°179.7°
CAACABNACNAD179.3°180.0°
CAACABNAMCAE179.4°179.9°
CAACABNAMCAN0.7°0.0°
CABCAAHAAHAAA120.0°120.0°
CABCAAHAAHAAB120.0°120.0°
CABCAAHAAAHAAB120.0°120.1°
CABNACNADCAE0.2°0.0°
NACCABNAMCAE0.2°0.4°
NACCABNAMCAN178.9°179.7°
NACCABCAAHAA0.0°90.1°
NACCABCAAHAAA120.0°150.0°
NACCABCAAHAAB120.0°29.9°
NAMCABNACNAD0.2°0.3°
CABNAMCAENAD0.1°0.4°
CABNAMCAECAF178.5°179.9°
CABNAMCAECAN178.6°179.9°
CABNAMCANCAO116.1°92.7°
NAMCABCAAHAA179.5°90.3°
NAMCABCAAHAAA60.5°29.6°
NAMCABCAAHAAB59.5°149.7°
CABNAMCANHAN123.9°147.2°
CABNAMCANHANA3.9°27.2°
NACNADCAECAF178.2°180.0°
NACNADCAENAM0.1°0.3°
NADCAECAFNAM177.9°179.7°
NADCAECAFCAG157.2°133.2°
NADCAECAFCAK26.6°47.2°
NADCAENAMCAN178.7°179.7°
CAECAFCAGCAK176.9°179.7°
CAECAFCAGNAH178.9°180.0°
CAECAFCAKNAI178.2°179.8°
CAECAFCAKNAL2.6°0.1°
CAFCAENAMCAN2.9°0.0°
CAECAFCAGHAG1.1°0.0°
NAMCAECAFCAG24.9°46.5°
NAMCAECAFCAK151.4°133.2°
CAENAMCANCAO65.5°87.1°
CAENAMCANHAN54.5°32.9°
CAENAMCANHANA174.5°152.9°
CAFCAGNAHHAG180.0°180.0°
CAFCAGNAHNAI2.2°0.0°
CAGCAFCAKNAI1.2°0.5°
CAGCAFCAKNAL179.6°179.8°
CAKCAFCAGNAH2.0°0.3°
CAFCAKNAINAH0.0°0.5°
CAFCAKNAICAJ179.2°179.9°
CAFCAKNAINAL179.1°179.7°
CAKCAFCAGHAG178.0°179.7°
CAFCAKNALHNAL180.0°0.1°
CAFCAKNALHNAA60.0°180.0°
CAGNAHNAICAJ179.5°180.0°
CAGNAHNAICAK1.3°0.3°
NAHNAICAJCAK179.1°179.6°
NAHNAICAKNAL179.1°179.8°
NAINAHCAGHAG177.8°180.0°
NAHNAICAJHAJ0.0°89.9°
NAHNAICAJHAJA120.0°150.1°
NAHNAICAJHAJB120.0°30.1°
CAJNAICAKNAL0.1°0.2°
NAICAJHAJHAJA120.0°120.0°
NAICAJHAJHAJB120.0°120.0°
NAICAJHAJAHAJB120.0°120.0°
CAKNAICAJHAJ179.1°89.6°
CAKNAICAJHAJA60.9°30.4°
CAKNAICAJHAJB59.1°150.3°
NAICAKNALHNAL1.0°179.8°
NAICAKNALHNAA121.0°0.3°
CAKNALHNALHNAA120.0°179.9°
NAMCANCAOHAN120.0°120.1°
NAMCANCAOHANA120.0°119.9°
NAMCANCAOCAP161.1°180.0°
NAMCANHANHANA116.7°120.0°
NAMCANCAOHAO78.9°59.9°
NAMCANCAOHAOA41.1°60.1°
CANCAOCAPHAO120.0°120.1°
CANCAOCAPHAOA120.0°119.9°
CANCAOCAPNAQ178.4°179.9°
CAOCANHANHANA116.7°120.0°
CANCAOHAOHAOA120.3°120.0°
CANCAOCAPHAP61.6°59.9°
CANCAOCAPHAPA58.5°60.0°
CAOCAPNAQHAP120.0°120.0°
CAOCAPNAQHAPA120.0°120.0°
CAOCAPNAQCAR66.8°90.0°
CAOCAPNAQCAU113.9°90.3°
CAPCAOCANHAN41.1°59.9°
CAPCAOCANHANA78.9°60.1°
CAPCAOHAOHAOA120.3°120.0°
CAOCAPHAPHAPA117.9°120.0°
CAPNAQCARCAU179.4°179.8°
CAPNAQCARCAS179.4°180.0°
CAPNAQCAUNAT179.0°179.8°
NAQCAPCAOHAO58.5°60.0°
NAQCAPCAOHAOA61.6°60.0°
NAQCAPHAPHAPA117.9°120.0°
CAPNAQCARHAR0.5°0.0°
CAPNAQCAUHAU1.1°0.1°
NAQCARCASHAR180.0°180.0°
NAQCARCASNAT0.5°0.0°
CARNAQCAUNAT0.4°0.4°
CARNAQCAPHAP53.2°30.0°
CARNAQCAPHAPA173.2°150.0°
NAQCARCASHAS179.5°180.0°
CARNAQCAUHAU179.6°179.7°
CAUNAQCARCAS0.1°0.2°
NAQCAUNATCAS0.7°0.4°
NAQCAUNATHAU180.0°179.9°
CAUNAQCAPHAP126.1°149.8°
CAUNAQCAPHAPA6.1°29.8°
CAUNAQCARHAR179.9°179.8°
CARCASNATHAS180.0°180.0°
CARCASNATCAU0.8°0.3°
NATCASCARHAR179.4°180.0°
CASNATCAUHAU179.2°179.7°
CAUNATCASHAS179.2°179.7°
HAACAAHAAAHAAB120.0°119.9°
HAJCAJHAJAHAJB120.0°120.0°
HANCANCAOHAO161.1°180.0°
HANCANCAOHAOA78.9°60.0°
HANACANCAOHAO41.1°60.0°
HANACANCAOHAOA161.1°180.0°
HAOCAOCAPHAP178.5°180.0°
HAOCAOCAPHAPA61.5°60.1°
HAOACAOCAPHAP58.4°60.0°
HAOACAOCAPHAPA178.5°180.0°
HARCARCASHAS0.5°0.0°

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PDB entries from 2026-02-04

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