O7M
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| C8 | O72 | sing | 1.45Å | 1.42Å | |
| O72 | C7 | sing | 1.35Å | 1.45Å | |
| O71 | C7 | doub | 1.21Å | 1.22Å | |
| C7 | C6 | sing | 1.48Å | 1.47Å | |
| C5 | C6 | doub | 1.36Å | 1.39Å | |
| C5 | C4 | sing | 1.47Å | 1.40Å | |
| C6 | N1 | sing | 1.38Å | 1.38Å | |
| O4' | C1' | sing | 1.45Å | 1.43Å | |
| O4' | C4' | sing | 1.44Å | 1.45Å | |
| O4 | C4 | doub | 1.22Å | 1.28Å | |
| C4 | N3 | sing | 1.35Å | 1.34Å | |
| N1 | C1' | sing | 1.46Å | 1.48Å | |
| N1 | C2 | sing | 1.34Å | 1.30Å | |
| C1' | C2' | sing | 1.54Å | 1.53Å | |
| C4' | C5' | sing | 1.53Å | 1.50Å | |
| C4' | C3' | sing | 1.55Å | 1.51Å | |
| N3 | C2 | sing | 1.34Å | 1.36Å | |
| C2 | O2 | doub | 1.22Å | 1.25Å | |
| O3' | C3' | sing | 1.43Å | 1.44Å | |
| C5' | O5' | sing | 1.43Å | 1.45Å | |
| C3' | C2' | sing | 1.54Å | 1.53Å | |
| C2' | O2' | sing | 1.43Å | 1.42Å | |
| O3P | P | doub | 1.48Å | 1.50Å | |
| O5' | P | sing | 1.61Å | 1.62Å | |
| P | O1P | sing | 1.61Å | 1.50Å | |
| P | O2P | sing | 1.61Å | 1.52Å | |
| O1P | H1 | sing | 0.97Å | 0.95Å | |
| O2P | H2 | sing | 0.97Å | 0.95Å | |
| C5' | H3 | sing | 1.09Å | 1.10Å | |
| C5' | H4 | sing | 1.09Å | 1.10Å | |
| C4' | H5 | sing | 1.09Å | 1.10Å | |
| C3' | H6 | sing | 1.09Å | 1.10Å | |
| O3' | H7 | sing | 0.97Å | 0.95Å | |
| C2' | H8 | sing | 1.09Å | 1.10Å | |
| O2' | H9 | sing | 0.97Å | 0.95Å | |
| C1' | H10 | sing | 1.09Å | 1.10Å | |
| N3 | H11 | sing | 0.97Å | 1.00Å | |
| C5 | H12 | sing | 1.08Å | 1.08Å | |
| C8 | H15 | sing | 1.09Å | 1.10Å | |
| C8 | H16 | sing | 1.09Å | 1.10Å | |
| C8 | H17 | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| C8 | O72 | C7 | 121.1° | 117.0° |
| O72 | C8 | H15 | 109.5° | 109.5° |
| O72 | C8 | H16 | 109.5° | 109.5° |
| O72 | C8 | H17 | 109.5° | 109.4° |
| O72 | C7 | O71 | 120.6° | 120.0° |
| O72 | C7 | C6 | 118.4° | 120.0° |
| O71 | C7 | C6 | 121.0° | 120.0° |
| C7 | C6 | C5 | 116.3° | 120.3° |
| C7 | C6 | N1 | 117.4° | 120.3° |
| C6 | C5 | C4 | 114.8° | 118.4° |
| C5 | C6 | N1 | 123.3° | 119.4° |
| C6 | C5 | H12 | 122.6° | 120.8° |
| C5 | C4 | O4 | 121.9° | 120.5° |
| C5 | C4 | N3 | 120.9° | 118.8° |
| C4 | C5 | H12 | 122.6° | 120.8° |
| C6 | N1 | C1' | 117.9° | 119.5° |
| C6 | N1 | C2 | 117.7° | 121.2° |
| C1' | O4' | C4' | 111.6° | 105.3° |
| O4' | C1' | N1 | 108.9° | 110.4° |
| O4' | C1' | C2' | 105.8° | 104.8° |
| O4' | C1' | H10 | 109.9° | 110.3° |
| O4' | C4' | C5' | 108.8° | 110.4° |
| O4' | C4' | C3' | 103.0° | 104.8° |
| O4' | C4' | H5 | 110.4° | 110.5° |
| O4 | C4 | N3 | 117.3° | 120.6° |
| C4 | N3 | C2 | 120.9° | 120.4° |
| C4 | N3 | H11 | 119.6° | 119.7° |
| C1' | N1 | C2 | 124.4° | 119.4° |
| N1 | C1' | C2' | 114.2° | 110.4° |
| N1 | C1' | H10 | 109.4° | 110.4° |
| N1 | C2 | N3 | 122.3° | 121.8° |
| N1 | C2 | O2 | 120.2° | 119.1° |
| C1' | C2' | C3' | 99.6° | 104.1° |
| C1' | C2' | O2' | 110.0° | 110.5° |
| C1' | C2' | H8 | 111.6° | 110.6° |
| C2' | C1' | H10 | 108.6° | 110.4° |
| C5' | C4' | C3' | 115.3° | 110.4° |
| C4' | C5' | O5' | 103.3° | 109.5° |
| C4' | C5' | H3 | 111.0° | 109.5° |
| C4' | C5' | H4 | 111.0° | 109.5° |
| C5' | C4' | H5 | 109.6° | 110.3° |
| C4' | C3' | O3' | 110.9° | 110.5° |
| C4' | C3' | C2' | 104.9° | 104.1° |
| C3' | C4' | H5 | 109.6° | 110.4° |
| C4' | C3' | H6 | 109.9° | 110.5° |
| N3 | C2 | O2 | 117.5° | 119.1° |
| C2 | N3 | H11 | 119.6° | 119.8° |
| O3' | C3' | C2' | 110.2° | 110.5° |
| O3' | C3' | H6 | 111.0° | 110.6° |
| C3' | O3' | H7 | 109.5° | 114.0° |
| C5' | O5' | P | 120.8° | 123.0° |
| O5' | C5' | H3 | 111.0° | 109.5° |
| O5' | C5' | H4 | 111.0° | 109.4° |
| C3' | C2' | O2' | 109.7° | 110.5° |
| C2' | C3' | H6 | 109.7° | 110.5° |
| C3' | C2' | H8 | 111.7° | 110.5° |
| O2' | C2' | H8 | 113.4° | 110.5° |
| C2' | O2' | H9 | 109.5° | 114.0° |
| O3P | P | O5' | 108.7° | 109.5° |
| O3P | P | O1P | 111.1° | 109.5° |
| O3P | P | O2P | 113.0° | 109.5° |
| O5' | P | O1P | 108.9° | 109.5° |
| O5' | P | O2P | 102.0° | 109.5° |
| O1P | P | O2P | 112.6° | 109.5° |
| P | O1P | H1 | 109.5° | 114.0° |
| P | O2P | H2 | 109.5° | 114.0° |
| H3 | C5' | H4 | 109.4° | 109.4° |
| H15 | C8 | H16 | 109.5° | 109.5° |
| H15 | C8 | H17 | 109.5° | 109.5° |
| H16 | C8 | H17 | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| C8 | O72 | C7 | O71 | 63.9° | 0.1° |
| C8 | O72 | C7 | C6 | 115.4° | 180.0° |
| O72 | C8 | H15 | H16 | 120.0° | 120.0° |
| O72 | C8 | H15 | H17 | 120.0° | 120.0° |
| O72 | C8 | H16 | H17 | 120.0° | 119.9° |
| O72 | C7 | O71 | C6 | 179.2° | 179.9° |
| O72 | C7 | C6 | C5 | 42.3° | 85.3° |
| O72 | C7 | C6 | N1 | 156.5° | 94.1° |
| C7 | O72 | C8 | H15 | 180.0° | 59.9° |
| C7 | O72 | C8 | H16 | 60.0° | 180.0° |
| C7 | O72 | C8 | H17 | 60.0° | 60.1° |
| O71 | C7 | C6 | C5 | 136.9° | 94.7° |
| O71 | C7 | C6 | N1 | 24.2° | 86.0° |
| C7 | C6 | C5 | N1 | 159.9° | 179.4° |
| C7 | C6 | C5 | C4 | 155.6° | 180.0° |
| C7 | C6 | N1 | C1' | 24.9° | 0.3° |
| C7 | C6 | N1 | C2 | 154.1° | 180.0° |
| C7 | C6 | C5 | H12 | 24.4° | 0.6° |
| C6 | C5 | C4 | H12 | 180.0° | 179.4° |
| C6 | C5 | C4 | O4 | 176.7° | 179.6° |
| C6 | C5 | C4 | N3 | 2.0° | 0.4° |
| C5 | C6 | N1 | C1' | 175.4° | 179.7° |
| C5 | C6 | N1 | C2 | 5.7° | 0.7° |
| C4 | C5 | C6 | N1 | 4.3° | 0.7° |
| C5 | C4 | O4 | N3 | 178.7° | 180.0° |
| C5 | C4 | N3 | C2 | 1.1° | 0.0° |
| C5 | C4 | N3 | H11 | 178.8° | 179.9° |
| C6 | N1 | C1' | O4' | 114.1° | 128.8° |
| C6 | N1 | C1' | C2 | 178.9° | 179.7° |
| C6 | N1 | C1' | C2' | 127.9° | 115.8° |
| C6 | N1 | C2 | N3 | 4.6° | 0.3° |
| C6 | N1 | C2 | O2 | 176.9° | 179.7° |
| C6 | N1 | C1' | H10 | 6.0° | 6.6° |
| N1 | C6 | C5 | H12 | 175.7° | 180.0° |
| O4' | C1' | N1 | C2' | 117.9° | 115.4° |
| O4' | C1' | N1 | H10 | 120.2° | 122.2° |
| O4' | C1' | N1 | C2 | 64.8° | 51.6° |
| O4' | C1' | C2' | H10 | 118.0° | 118.8° |
| C1' | O4' | C4' | C5' | 110.5° | 159.3° |
| C1' | O4' | C4' | C3' | 12.3° | 40.5° |
| O4' | C1' | C2' | C3' | 30.8° | 24.0° |
| O4' | C1' | C2' | O2' | 145.9° | 142.6° |
| C1' | O4' | C4' | H5 | 129.2° | 78.4° |
| O4' | C1' | C2' | H8 | 87.3° | 94.7° |
| C4' | O4' | C1' | N1 | 135.4° | 159.4° |
| C4' | O4' | C1' | C2' | 12.3° | 40.5° |
| O4' | C4' | C5' | C3' | 115.0° | 115.4° |
| O4' | C4' | C5' | H5 | 120.8° | 122.4° |
| O4' | C4' | C3' | H5 | 117.5° | 118.9° |
| O4' | C4' | C3' | O3' | 86.9° | 142.6° |
| O4' | C4' | C5' | O5' | 171.7° | 69.6° |
| O4' | C4' | C3' | C2' | 32.2° | 24.0° |
| O4' | C4' | C5' | H3 | 69.2° | 50.4° |
| O4' | C4' | C5' | H4 | 52.7° | 170.4° |
| O4' | C4' | C3' | H6 | 150.0° | 94.7° |
| C4' | O4' | C1' | H10 | 104.8° | 78.3° |
| O4 | C4 | N3 | C2 | 177.6° | 180.0° |
| O4 | C4 | N3 | H11 | 2.4° | 0.1° |
| O4 | C4 | C5 | H12 | 3.2° | 0.3° |
| C4 | N3 | C2 | N1 | 2.5° | 0.0° |
| C4 | N3 | C2 | H11 | 180.0° | 179.9° |
| C4 | N3 | C2 | O2 | 179.0° | 180.0° |
| N3 | C4 | C5 | H12 | 178.1° | 179.7° |
| N1 | C1' | C2' | H10 | 122.3° | 122.4° |
| C1' | N1 | C2 | N3 | 176.5° | 179.9° |
| C1' | N1 | C2 | O2 | 2.0° | 0.0° |
| N1 | C1' | C2' | C3' | 150.5° | 142.8° |
| N1 | C1' | C2' | O2' | 94.3° | 98.5° |
| N1 | C1' | C2' | H8 | 32.4° | 24.1° |
| C2 | N1 | C1' | C2' | 53.1° | 63.8° |
| N1 | C2 | N3 | O2 | 178.5° | 180.0° |
| C2 | N1 | C1' | H10 | 175.0° | 173.8° |
| N1 | C2 | N3 | H11 | 177.4° | 179.9° |
| C1' | C2' | C3' | C4' | 38.5° | 0.0° |
| C1' | C2' | C3' | O3' | 81.0° | 118.7° |
| C1' | C2' | C3' | O2' | 115.4° | 118.7° |
| C1' | C2' | C3' | H8 | 118.0° | 118.7° |
| C1' | C2' | O2' | H8 | 125.7° | 122.7° |
| C1' | C2' | C3' | H6 | 156.6° | 118.7° |
| C1' | C2' | O2' | H9 | 180.0° | 176.1° |
| C5' | C4' | C3' | H5 | 124.2° | 122.2° |
| C5' | C4' | C3' | O3' | 154.8° | 98.5° |
| C4' | C5' | O5' | H3 | 119.0° | 120.0° |
| C4' | C5' | O5' | H4 | 119.0° | 120.0° |
| C5' | C4' | C3' | C2' | 86.2° | 142.8° |
| C4' | C5' | O5' | P | 179.9° | 180.0° |
| C4' | C5' | H3 | H4 | 122.8° | 120.0° |
| C5' | C4' | C3' | H6 | 31.7° | 24.2° |
| C4' | C3' | O3' | C2' | 115.8° | 114.7° |
| C4' | C3' | O3' | H6 | 122.5° | 122.7° |
| C3' | C4' | C5' | O5' | 73.2° | 175.0° |
| C4' | C3' | C2' | H6 | 118.0° | 118.6° |
| C4' | C3' | C2' | O2' | 153.9° | 118.7° |
| C3' | C4' | C5' | H3 | 45.8° | 65.0° |
| C3' | C4' | C5' | H4 | 167.7° | 55.0° |
| C4' | C3' | O3' | H7 | 180.0° | 180.0° |
| C4' | C3' | C2' | H8 | 79.5° | 118.7° |
| O2 | C2 | N3 | H11 | 1.1° | 0.1° |
| O3' | C3' | C2' | H6 | 122.5° | 122.7° |
| O3' | C3' | C2' | O2' | 34.4° | 0.0° |
| O3' | C3' | C4' | H5 | 30.6° | 23.7° |
| O3' | C3' | C2' | H8 | 161.0° | 122.6° |
| C5' | O5' | P | O3P | 83.6° | 55.0° |
| C5' | O5' | P | O1P | 37.6° | 65.0° |
| C5' | O5' | P | O2P | 156.8° | 175.0° |
| O5' | C5' | H3 | H4 | 122.9° | 119.9° |
| O5' | C5' | C4' | H5 | 51.0° | 52.8° |
| C3' | C2' | O2' | H8 | 125.6° | 122.6° |
| C2' | C3' | C4' | H5 | 149.6° | 95.0° |
| C2' | C3' | O3' | H7 | 64.2° | 65.3° |
| C3' | C2' | O2' | H9 | 71.3° | 61.4° |
| C3' | C2' | C1' | H10 | 87.2° | 94.8° |
| O2' | C2' | C3' | H6 | 88.0° | 122.7° |
| O2' | C2' | C1' | H10 | 28.0° | 23.9° |
| O3P | P | O5' | O1P | 121.2° | 120.0° |
| O3P | P | O5' | O2P | 119.6° | 120.0° |
| O3P | P | O1P | O2P | 128.0° | 120.0° |
| O3P | P | O1P | H1 | 0.0° | 180.0° |
| O3P | P | O2P | H2 | 0.0° | 60.0° |
| O5' | P | O1P | O2P | 112.3° | 120.0° |
| O5' | P | O1P | H1 | 119.7° | 60.0° |
| O5' | P | O2P | H2 | 116.5° | 180.0° |
| P | O5' | C5' | H3 | 61.1° | 60.0° |
| P | O5' | C5' | H4 | 60.9° | 60.0° |
| O1P | P | O2P | H2 | 126.9° | 60.0° |
| O2P | P | O1P | H1 | 128.0° | 60.0° |
| H3 | C5' | C4' | H5 | 170.0° | 172.8° |
| H4 | C5' | C4' | H5 | 68.1° | 67.2° |
| H5 | C4' | C3' | H6 | 92.5° | 146.4° |
| H6 | C3' | O3' | H7 | 57.5° | 57.3° |
| H6 | C3' | C2' | H8 | 38.6° | 0.1° |
| H8 | C2' | O2' | H9 | 54.3° | 61.2° |
| H8 | C2' | C1' | H10 | 154.8° | 146.5° |
| H15 | C8 | H16 | H17 | 120.0° | 120.0° |
