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O7L

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CC1sing1.51Å1.49Å
C1C2sing1.42Å1.47Å
C1Odoub1.21Å1.24Å
C3C4sing1.37Å1.40ÅAromatic
C3C2doub1.37Å1.37ÅAromatic
C4C5doub1.37Å1.37ÅAromatic
C2Ssing1.76Å1.73ÅAromatic
C5C6sing1.43Å1.42Å
C5Ssing1.76Å1.74ÅAromatic
C6Ntrip1.14Å1.14Å
C3H1sing1.08Å1.08Å
C4H2sing1.08Å1.08Å
CH3sing1.09Å1.10Å
CH4sing1.09Å1.10Å
CH5sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CC1C2118.2°120.0°
CC1O121.1°120.0°
C1CH3109.5°109.5°
C1CH4109.5°109.5°
C1CH5109.5°109.5°
C2C1O120.7°120.0°
C1C2C3130.3°125.1°
C1C2S118.8°125.2°
C4C3C2113.6°114.7°
C3C4C5113.1°114.8°
C4C3H1123.2°122.6°
C3C4H2123.5°122.6°
C3C2S110.7°109.7°
C2C3H1123.2°122.6°
C4C5C6127.4°125.2°
C4C5S110.9°109.7°
C5C4H2123.4°122.6°
C2SC591.7°91.2°
C6C5S121.7°125.1°
C5C6N178.0°180.0°
H3CH4109.4°109.5°
H3CH5109.5°109.4°
H4CH5109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CC1C2O178.3°179.7°
CC1C2C316.7°179.4°
CC1C2S157.4°0.3°
C1CH3H4120.0°120.0°
C1CH3H5120.0°120.0°
C1CH4H5120.0°120.0°
C1C2C3C4174.0°180.0°
C1C2C3S174.5°179.8°
C1C2SC5174.6°180.0°
C1C2C3H16.0°0.0°
C2C1CH3178.3°60.0°
C2C1CH461.7°180.0°
C2C1CH558.3°60.0°
OC1C2C3165.0°0.3°
OC1C2S20.9°180.0°
OC1CH30.0°119.7°
OC1CH4120.0°0.3°
OC1CH5120.0°120.3°
C4C3C2H1180.0°180.0°
C3C4C5H2180.0°179.9°
C4C3C2S0.5°0.2°
C3C4C5C6179.5°180.0°
C3C4C5S0.3°0.3°
C2C3C4C50.2°0.0°
C3C2SC50.6°0.3°
C2C3C4H2179.8°180.0°
C4C5SC20.5°0.3°
C4C5C6S179.8°179.7°
C4C5C6N173.8°0.3°
C5C4C3H1179.9°180.0°
C2SC5C6179.3°180.0°
SC2C3H1179.5°179.8°
C6C5C4H20.5°0.1°
SC5C6N6.0°180.0°
SC5C4H2179.7°179.8°
H1C3C4H20.2°0.1°
H3CH4H5120.0°120.0°

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PDB entries from 2024-07-10

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