O7D
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| CCT | N | sing | 1.47Å | 1.46Å | |
| CA | CCW | sing | 1.53Å | 1.53Å | |
| CA | N | sing | 1.47Å | 1.48Å | |
| CA | C | sing | 1.51Å | 1.52Å | |
| CCW | CCX | sing | 1.51Å | 1.55Å | |
| CCX | CCY | doub | 1.34Å | 1.39Å | Aromatic |
| CCX | CDB | sing | 1.46Å | 1.45Å | Aromatic |
| CCY | NCZ | sing | 1.37Å | 1.34Å | Aromatic |
| CDA | NCZ | sing | 1.38Å | 1.37Å | Aromatic |
| CDA | CDF | doub | 1.39Å | 1.44Å | Aromatic |
| CDA | CDB | sing | 1.41Å | 1.38Å | Aromatic |
| CDB | CDC | doub | 1.40Å | 1.44Å | Aromatic |
| CDC | ODG | sing | 1.36Å | 1.41Å | |
| CDC | CDD | sing | 1.38Å | 1.41Å | Aromatic |
| CDD | CDE | doub | 1.39Å | 1.40Å | Aromatic |
| CDE | CDF | sing | 1.38Å | 1.40Å | Aromatic |
| CDH | ODG | sing | 1.43Å | 1.41Å | |
| C | O | doub | 1.21Å | 1.19Å | |
| CCT | HCT2 | sing | 1.09Å | 1.10Å | |
| CCT | HCT3 | sing | 1.09Å | 1.10Å | |
| CCT | HCT1 | sing | 1.09Å | 1.10Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CCW | HCW1 | sing | 1.09Å | 1.10Å | |
| CCW | HCW2 | sing | 1.09Å | 1.10Å | |
| CCY | HCY1 | sing | 1.08Å | 1.08Å | |
| CDD | HDD1 | sing | 1.08Å | 1.08Å | |
| CDE | HDE1 | sing | 1.08Å | 1.08Å | |
| CDF | HDF1 | sing | 1.08Å | 1.08Å | |
| CDH | HDH2 | sing | 1.09Å | 1.10Å | |
| CDH | HDH3 | sing | 1.09Å | 1.10Å | |
| CDH | HDH1 | sing | 1.09Å | 1.10Å | |
| NCZ | H4 | sing | 0.97Å | 1.00Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| C | OXT | sing | 1.34Å | 1.46Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CCT | N | CA | 121.3° | 111.0° |
| N | CCT | HCT2 | 109.5° | 109.5° |
| N | CCT | HCT3 | 109.5° | 109.4° |
| N | CCT | HCT1 | 109.5° | 109.5° |
| CCT | N | H | 106.5° | 111.0° |
| CCW | CA | N | 109.8° | 109.5° |
| CCW | CA | C | 108.9° | 109.5° |
| CA | CCW | CCX | 113.2° | 109.5° |
| CCW | CA | HA | 107.7° | 109.4° |
| CA | CCW | HCW1 | 108.6° | 109.5° |
| CA | CCW | HCW2 | 108.6° | 109.5° |
| N | CA | C | 114.0° | 109.5° |
| N | CA | HA | 108.4° | 109.5° |
| CA | N | H | 106.5° | 111.0° |
| CA | C | O | 123.4° | 120.0° |
| C | CA | HA | 107.9° | 109.4° |
| CA | C | OXT | 117.8° | 120.0° |
| CCW | CCX | CCY | 126.2° | 126.5° |
| CCW | CCX | CDB | 126.8° | 126.5° |
| CCX | CCW | HCW1 | 108.5° | 109.4° |
| CCX | CCW | HCW2 | 108.5° | 109.5° |
| CCY | CCX | CDB | 107.0° | 107.0° |
| CCX | CCY | NCZ | 109.1° | 109.9° |
| CCX | CCY | HCY1 | 125.4° | 125.1° |
| CCX | CDB | CDA | 104.7° | 106.1° |
| CCX | CDB | CDC | 135.4° | 134.0° |
| CCY | NCZ | CDA | 109.0° | 109.8° |
| NCZ | CCY | HCY1 | 125.5° | 125.1° |
| CCY | NCZ | H4 | 125.5° | 125.1° |
| NCZ | CDA | CDF | 130.4° | 133.3° |
| NCZ | CDA | CDB | 110.2° | 107.2° |
| CDA | NCZ | H4 | 125.5° | 125.1° |
| CDF | CDA | CDB | 119.4° | 119.5° |
| CDA | CDF | CDE | 120.7° | 120.0° |
| CDA | CDF | HDF1 | 119.6° | 120.0° |
| CDA | CDB | CDC | 119.8° | 119.9° |
| CDB | CDC | ODG | 120.6° | 120.2° |
| CDB | CDC | CDD | 120.1° | 119.6° |
| ODG | CDC | CDD | 119.3° | 120.2° |
| CDC | ODG | CDH | 122.7° | 117.0° |
| CDC | CDD | CDE | 120.2° | 120.3° |
| CDC | CDD | HDD1 | 119.9° | 119.8° |
| CDD | CDE | CDF | 119.7° | 120.7° |
| CDE | CDD | HDD1 | 119.9° | 119.9° |
| CDD | CDE | HDE1 | 120.1° | 119.6° |
| CDF | CDE | HDE1 | 120.2° | 119.7° |
| CDE | CDF | HDF1 | 119.7° | 120.0° |
| ODG | CDH | HDH2 | 109.5° | 109.4° |
| ODG | CDH | HDH3 | 109.5° | 109.5° |
| ODG | CDH | HDH1 | 109.5° | 109.5° |
| O | C | OXT | 118.8° | 120.0° |
| HCT2 | CCT | HCT3 | 109.5° | 109.5° |
| HCT2 | CCT | HCT1 | 109.5° | 109.5° |
| HCT3 | CCT | HCT1 | 109.5° | 109.5° |
| HCW1 | CCW | HCW2 | 109.5° | 109.4° |
| HDH2 | CDH | HDH3 | 109.4° | 109.4° |
| HDH2 | CDH | HDH1 | 109.5° | 109.5° |
| HDH3 | CDH | HDH1 | 109.4° | 109.5° |
| C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CCT | N | CA | CCW | 117.0° | 157.0° |
| CCT | N | CA | H | 121.7° | 123.9° |
| CCT | N | CA | C | 120.5° | 82.9° |
| N | CCT | HCT2 | HCT3 | 120.0° | 120.0° |
| N | CCT | HCT2 | HCT1 | 120.0° | 120.0° |
| N | CCT | HCT3 | HCT1 | 120.0° | 120.0° |
| CCT | N | CA | HA | 0.4° | 37.0° |
| CCW | CA | N | C | 122.5° | 120.1° |
| CCW | CA | N | HA | 117.5° | 120.0° |
| CCW | CA | C | HA | 116.6° | 120.0° |
| CA | CCW | CCX | HCW1 | 120.6° | 120.0° |
| CA | CCW | CCX | HCW2 | 120.6° | 120.1° |
| CA | CCW | CCX | CCY | 114.7° | 99.5° |
| CA | CCW | CCX | CDB | 64.9° | 80.7° |
| CCW | CA | C | O | 37.3° | 93.9° |
| CA | CCW | HCW1 | HCW2 | 118.3° | 120.0° |
| CCW | CA | N | H | 4.7° | 33.0° |
| CCW | CA | C | OXT | 143.3° | 86.0° |
| N | CA | C | HA | 120.4° | 120.0° |
| N | CA | CCW | CCX | 41.5° | 65.0° |
| N | CA | C | O | 160.3° | 26.2° |
| CA | N | CCT | HCT2 | 180.0° | 64.8° |
| CA | N | CCT | HCT3 | 60.0° | 55.2° |
| CA | N | CCT | HCT1 | 60.0° | 175.2° |
| N | CA | CCW | HCW1 | 79.1° | 55.0° |
| N | CA | CCW | HCW2 | 162.0° | 174.9° |
| N | CA | C | OXT | 20.3° | 153.9° |
| C | CA | CCW | CCX | 166.9° | 174.9° |
| CA | C | O | OXT | 179.4° | 179.9° |
| C | CA | CCW | HCW1 | 46.4° | 65.1° |
| C | CA | CCW | HCW2 | 72.5° | 54.9° |
| C | CA | N | H | 117.8° | 153.1° |
| CA | C | OXT | HXT | 179.4° | 180.0° |
| CCW | CCX | CCY | CDB | 179.7° | 179.8° |
| CCW | CCX | CCY | NCZ | 179.1° | 180.0° |
| CCW | CCX | CDB | CDA | 179.2° | 180.0° |
| CCW | CCX | CDB | CDC | 1.8° | 0.0° |
| CCX | CCW | CA | HA | 76.4° | 55.0° |
| CCX | CCW | HCW1 | HCW2 | 118.3° | 120.0° |
| CCW | CCX | CCY | HCY1 | 0.9° | 0.0° |
| CCX | CCY | NCZ | HCY1 | 180.0° | 180.0° |
| CCX | CCY | NCZ | CDA | 0.9° | 0.1° |
| CCY | CCX | CDB | CDA | 1.2° | 0.2° |
| CCY | CCX | CDB | CDC | 177.9° | 179.8° |
| CCY | CCX | CCW | HCW1 | 5.9° | 20.4° |
| CCY | CCX | CCW | HCW2 | 124.8° | 140.4° |
| CCX | CCY | NCZ | H4 | 179.1° | 180.0° |
| CDB | CCX | CCY | NCZ | 1.3° | 0.2° |
| CCX | CDB | CDA | NCZ | 0.6° | 0.1° |
| CCX | CDB | CDA | CDF | 179.9° | 180.0° |
| CCX | CDB | CDA | CDC | 179.2° | 180.0° |
| CCX | CDB | CDC | ODG | 2.4° | 0.0° |
| CCX | CDB | CDC | CDD | 179.4° | 180.0° |
| CDB | CCX | CCW | HCW1 | 174.5° | 159.3° |
| CDB | CCX | CCW | HCW2 | 55.6° | 39.3° |
| CDB | CCX | CCY | HCY1 | 178.7° | 179.8° |
| CCY | NCZ | CDA | H4 | 180.0° | 179.9° |
| CCY | NCZ | CDA | CDF | 179.3° | 179.9° |
| CCY | NCZ | CDA | CDB | 0.1° | 0.0° |
| NCZ | CDA | CDF | CDB | 179.3° | 179.8° |
| NCZ | CDA | CDB | CDC | 178.6° | 179.9° |
| NCZ | CDA | CDF | CDE | 179.3° | 179.9° |
| CDA | NCZ | CCY | HCY1 | 179.1° | 179.9° |
| NCZ | CDA | CDF | HDF1 | 0.7° | 0.0° |
| CDF | CDA | CDB | CDC | 0.9° | 0.0° |
| CDA | CDF | CDE | CDD | 2.8° | 0.0° |
| CDA | CDF | CDE | HDF1 | 180.0° | 179.9° |
| CDA | CDF | CDE | HDE1 | 177.2° | 179.9° |
| CDF | CDA | NCZ | H4 | 0.7° | 0.0° |
| CDA | CDB | CDC | ODG | 178.7° | 180.0° |
| CDA | CDB | CDC | CDD | 1.7° | 0.0° |
| CDB | CDA | CDF | CDE | 1.3° | 0.0° |
| CDB | CDA | CDF | HDF1 | 178.7° | 179.9° |
| CDB | CDA | NCZ | H4 | 179.9° | 179.8° |
| CDB | CDC | ODG | CDD | 176.9° | 180.0° |
| CDB | CDC | CDD | CDE | 0.3° | 0.0° |
| CDB | CDC | ODG | CDH | 136.8° | 180.0° |
| CDB | CDC | CDD | HDD1 | 179.7° | 180.0° |
| ODG | CDC | CDD | CDE | 177.3° | 180.0° |
| ODG | CDC | CDD | HDD1 | 2.7° | 0.0° |
| CDC | ODG | CDH | HDH2 | 180.0° | 60.0° |
| CDC | ODG | CDH | HDH3 | 60.0° | 60.0° |
| CDC | ODG | CDH | HDH1 | 60.0° | 180.0° |
| CDC | CDD | CDE | HDD1 | 180.0° | 180.0° |
| CDC | CDD | CDE | CDF | 1.9° | 0.0° |
| CDD | CDC | ODG | CDH | 46.3° | 0.0° |
| CDC | CDD | CDE | HDE1 | 178.1° | 179.9° |
| CDD | CDE | CDF | HDE1 | 180.0° | 179.9° |
| CDD | CDE | CDF | HDF1 | 177.3° | 179.9° |
| CDF | CDE | CDD | HDD1 | 178.1° | 180.0° |
| ODG | CDH | HDH2 | HDH3 | 120.0° | 120.0° |
| ODG | CDH | HDH2 | HDH1 | 120.0° | 120.0° |
| ODG | CDH | HDH3 | HDH1 | 120.0° | 120.0° |
| O | C | CA | HA | 79.3° | 146.2° |
| O | C | OXT | HXT | 0.0° | 0.1° |
| HCT2 | CCT | HCT3 | HCT1 | 120.0° | 120.0° |
| HCT2 | CCT | N | H | 58.3° | 59.1° |
| HCT3 | CCT | N | H | 61.7° | 179.1° |
| HCT1 | CCT | N | H | 178.3° | 60.9° |
| HA | CA | CCW | HCW1 | 163.1° | 174.9° |
| HA | CA | CCW | HCW2 | 44.2° | 65.1° |
| HA | CA | N | H | 122.1° | 86.9° |
| HA | CA | C | OXT | 100.1° | 34.0° |
| HCY1 | CCY | NCZ | H4 | 0.9° | 0.0° |
| HDD1 | CDD | CDE | HDE1 | 1.9° | 0.1° |
| HDE1 | CDE | CDF | HDF1 | 2.8° | 0.0° |
| HDH2 | CDH | HDH3 | HDH1 | 120.0° | 120.0° |
