O6Y

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C24	O23	sing	1.43Å	1.39Å
C24	C25	sing	1.53Å	1.54Å
O23	C22	sing	1.43Å	1.40Å
C25	N20	sing	1.47Å	1.49Å
C15	C16	doub	1.38Å	1.39Å	Aromatic
C15	C14	sing	1.38Å	1.39Å	Aromatic
C17	C14	sing	1.51Å	1.50Å
C17	C18	sing	1.51Å	1.51Å
C16	C11	sing	1.39Å	1.39Å	Aromatic
C14	C13	doub	1.38Å	1.40Å	Aromatic
N20	C18	sing	1.35Å	1.41Å
N20	C21	sing	1.47Å	1.51Å
C22	C21	sing	1.53Å	1.54Å
C11	O10	sing	1.36Å	1.38Å
C11	C12	doub	1.39Å	1.39Å	Aromatic
C18	O19	doub	1.21Å	1.23Å
C13	C12	sing	1.38Å	1.39Å	Aromatic
O10	C04	sing	1.36Å	1.38Å
C04	C03	doub	1.39Å	1.40Å	Aromatic
C04	C05	sing	1.39Å	1.40Å	Aromatic
C03	C02	sing	1.38Å	1.39Å	Aromatic
C05	C06	doub	1.38Å	1.39Å	Aromatic
C02	C01	sing	1.51Å	1.50Å
C02	C07	doub	1.40Å	1.41Å	Aromatic
C06	C07	sing	1.40Å	1.40Å	Aromatic
C07	C08	sing	1.43Å	1.43Å
C08	N09	trip	1.14Å	1.15Å
C12	H1	sing	1.08Å	1.08Å
C13	H2	sing	1.08Å	1.08Å
C15	H3	sing	1.08Å	1.08Å
C16	H4	sing	1.08Å	1.08Å
C17	H5	sing	1.09Å	1.10Å
C17	H6	sing	1.09Å	1.10Å
C21	H7	sing	1.09Å	1.10Å
C21	H8	sing	1.09Å	1.10Å
C22	H9	sing	1.09Å	1.10Å
C22	H10	sing	1.09Å	1.10Å
C24	H11	sing	1.09Å	1.10Å
C24	H12	sing	1.09Å	1.10Å
C25	H13	sing	1.09Å	1.10Å
C25	H14	sing	1.09Å	1.10Å
C01	H15	sing	1.09Å	1.10Å
C01	H16	sing	1.09Å	1.10Å
C01	H17	sing	1.09Å	1.10Å
C03	H18	sing	1.08Å	1.08Å
C05	H19	sing	1.08Å	1.08Å
C06	H20	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O23	C24	C25	110.6°	109.2°
C24	O23	C22	110.8°	114.1°
O23	C24	H11	109.2°	109.5°
O23	C24	H12	109.2°	109.5°
C24	C25	N20	113.6°	108.3°
C25	C24	H11	109.2°	109.5°
C25	C24	H12	109.2°	109.5°
C24	C25	H13	108.4°	109.7°
C24	C25	H14	108.4°	109.7°
O23	C22	C21	109.9°	109.2°
O23	C22	H9	109.3°	109.5°
O23	C22	H10	109.4°	109.5°
C25	N20	C18	124.8°	121.0°
C25	N20	C21	112.3°	118.0°
N20	C25	H13	108.4°	109.7°
N20	C25	H14	108.4°	109.7°
C16	C15	C14	122.4°	120.1°
C15	C16	C11	120.9°	119.9°
C16	C15	H3	118.8°	120.0°
C15	C16	H4	119.5°	120.1°
C15	C14	C17	121.8°	119.9°
C15	C14	C13	115.6°	120.1°
C14	C15	H3	118.8°	120.0°
C14	C17	C18	122.1°	109.4°
C17	C14	C13	122.6°	119.9°
C14	C17	H5	106.2°	109.5°
C14	C17	H6	106.2°	109.4°
C17	C18	N20	121.1°	120.0°
C17	C18	O19	120.1°	120.0°
C18	C17	H5	106.3°	109.5°
C18	C17	H6	106.2°	109.5°
C16	C11	O10	120.7°	120.0°
C16	C11	C12	117.9°	119.9°
C11	C16	H4	119.5°	120.0°
C14	C13	C12	123.1°	120.1°
C14	C13	H2	118.4°	120.0°
C18	N20	C21	123.0°	121.0°
N20	C18	O19	118.9°	120.0°
N20	C21	C22	112.8°	108.4°
N20	C21	H7	108.6°	109.7°
N20	C21	H8	108.6°	109.7°
C22	C21	H7	108.6°	109.7°
C22	C21	H8	108.6°	109.7°
C21	C22	H9	109.4°	109.5°
C21	C22	H10	109.3°	109.4°
O10	C11	C12	121.4°	120.1°
C11	O10	C04	125.2°	118.0°
C11	C12	C13	120.1°	120.0°
C11	C12	H1	120.0°	120.0°
C13	C12	H1	120.0°	120.0°
C12	C13	H2	118.4°	119.9°
O10	C04	C03	119.4°	119.9°
O10	C04	C05	120.6°	119.9°
C03	C04	C05	120.0°	120.2°
C04	C03	C02	121.9°	120.1°
C04	C03	H18	119.1°	119.9°
C04	C05	C06	119.1°	120.1°
C04	C05	H19	120.4°	120.0°
C03	C02	C01	121.3°	120.0°
C03	C02	C07	117.5°	119.9°
C02	C03	H18	119.1°	120.0°
C05	C06	C07	120.2°	119.9°
C06	C05	H19	120.5°	120.0°
C05	C06	H20	119.9°	120.1°
C01	C02	C07	121.2°	120.1°
C02	C01	H15	109.5°	109.5°
C02	C01	H16	109.5°	109.5°
C02	C01	H17	109.5°	109.5°
C02	C07	C06	121.3°	119.9°
C02	C07	C08	118.7°	120.1°
C06	C07	C08	120.0°	120.1°
C07	C06	H20	119.9°	120.1°
C07	C08	N09	179.9°	180.0°
H5	C17	H6	109.5°	109.5°
H7	C21	H8	109.5°	109.7°
H9	C22	H10	109.5°	109.5°
H11	C24	H12	109.5°	109.6°
H13	C25	H14	109.5°	109.7°
H15	C01	H16	109.4°	109.5°
H15	C01	H17	109.5°	109.5°
H16	C01	H17	109.5°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O23	C24	C25	H11	120.2°	119.9°
O23	C24	C25	H12	120.1°	120.0°
O23	C24	C25	N20	4.8°	52.3°
C24	O23	C22	C21	68.6°	62.6°
C24	O23	C22	H9	51.5°	57.3°
C24	O23	C22	H10	171.3°	177.5°
O23	C24	H11	H12	119.5°	120.1°
O23	C24	C25	H13	115.8°	172.0°
O23	C24	C25	H14	125.4°	67.4°
C25	C24	O23	C22	62.4°	62.6°
C24	C25	N20	H13	120.6°	119.7°
C24	C25	N20	H14	120.6°	119.7°
C24	C25	N20	C18	137.4°	129.5°
C24	C25	N20	C21	42.6°	50.6°
C25	C24	H11	H12	119.5°	120.2°
C24	C25	H13	H14	118.1°	120.6°
O23	C22	C21	N20	15.8°	52.4°
O23	C22	C21	H9	120.1°	120.0°
O23	C22	C21	H10	120.1°	119.9°
O23	C22	C21	H7	104.7°	67.4°
O23	C22	C21	H8	136.2°	172.1°
O23	C22	H9	H10	119.8°	120.2°
C22	O23	C24	H11	177.4°	177.5°
C22	O23	C24	H12	57.7°	57.4°
C25	N20	C18	C17	0.3°	180.0°
C25	N20	C18	C21	180.0°	180.0°
C25	N20	C21	C22	36.6°	50.6°
C25	N20	C18	O19	179.4°	0.0°
C25	N20	C21	H7	157.1°	69.2°
C25	N20	C21	H8	83.8°	170.3°
N20	C25	C24	H11	125.0°	172.2°
N20	C25	C24	H12	115.3°	67.6°
N20	C25	H13	H14	118.1°	120.5°
C16	C15	C14	H3	180.0°	179.5°
C16	C15	C14	C17	178.9°	179.8°
C15	C16	C11	H4	180.0°	179.5°
C16	C15	C14	C13	0.3°	0.3°
C15	C16	C11	O10	178.9°	179.8°
C15	C16	C11	C12	1.8°	0.5°
C15	C14	C17	C13	178.5°	179.9°
C15	C14	C17	C18	84.0°	90.0°
C14	C15	C16	C11	0.7°	0.5°
C15	C14	C13	C12	0.3°	0.0°
C15	C14	C13	H2	179.7°	180.0°
C14	C15	C16	H4	179.3°	180.0°
C15	C14	C17	H5	154.3°	30.0°
C15	C14	C17	H6	37.8°	150.0°
C14	C17	C18	H5	121.8°	120.0°
C14	C17	C18	H6	121.7°	120.0°
C14	C17	C18	N20	175.1°	180.0°
C14	C17	C18	O19	4.6°	0.0°
C17	C14	C13	C12	178.9°	179.9°
C17	C14	C13	H2	1.1°	0.0°
C17	C14	C15	H3	1.1°	0.3°
C14	C17	H5	H6	114.3°	120.0°
C18	C17	C14	C13	97.5°	90.0°
C17	C18	N20	O19	179.7°	180.0°
C17	C18	N20	C21	179.7°	0.0°
C18	C17	H5	H6	114.3°	120.0°
C16	C11	O10	C12	177.0°	179.7°
C16	C11	C12	C13	1.8°	0.3°
C16	C11	O10	C04	119.6°	0.1°
C16	C11	C12	H1	178.2°	179.7°
C11	C16	C15	H3	179.3°	179.9°
C14	C13	C12	C11	0.8°	0.0°
C14	C13	C12	H2	180.0°	180.0°
C14	C13	C12	H1	179.2°	180.0°
C13	C14	C15	H3	179.7°	179.8°
C13	C14	C17	H5	24.2°	150.0°
C13	C14	C17	H6	140.7°	30.0°
C18	N20	C21	C22	143.3°	129.4°
N20	C18	C17	H5	53.4°	60.0°
N20	C18	C17	H6	63.1°	60.0°
C18	N20	C21	H7	22.8°	110.8°
C18	N20	C21	H8	96.2°	9.7°
C18	N20	C25	H13	16.7°	9.8°
C18	N20	C25	H14	102.1°	110.8°
N20	C21	C22	H7	120.5°	119.8°
N20	C21	C22	H8	120.5°	119.7°
C21	N20	C18	O19	0.6°	180.0°
N20	C21	H7	H8	118.5°	120.5°
N20	C21	C22	H9	104.3°	67.6°
N20	C21	C22	H10	135.8°	172.3°
C21	N20	C25	H13	163.2°	170.2°
C21	N20	C25	H14	78.0°	69.2°
C22	C21	H7	H8	118.5°	120.5°
C21	C22	H9	H10	119.8°	120.1°
O10	C11	C12	C13	178.8°	180.0°
C11	O10	C04	C03	160.9°	90.0°
C11	O10	C04	C05	20.1°	89.9°
O10	C11	C12	H1	1.2°	0.0°
O10	C11	C16	H4	1.2°	0.3°
C11	C12	C13	H1	180.0°	180.0°
C12	C11	O10	C04	63.5°	179.6°
C11	C12	C13	H2	179.2°	180.0°
C12	C11	C16	H4	178.2°	180.0°
O19	C18	C17	H5	126.3°	120.0°
O19	C18	C17	H6	117.2°	120.0°
O10	C04	C03	C05	179.0°	179.9°
O10	C04	C03	C02	179.2°	180.0°
O10	C04	C05	C06	179.4°	179.9°
O10	C04	C03	H18	0.8°	0.0°
O10	C04	C05	H19	0.6°	0.0°
C04	C03	C02	H18	180.0°	180.0°
C03	C04	C05	C06	0.3°	0.0°
C04	C03	C02	C01	179.8°	180.0°
C04	C03	C02	C07	0.2°	0.2°
C03	C04	C05	H19	179.6°	180.0°
C05	C04	C03	C02	0.2°	0.1°
C04	C05	C06	H19	180.0°	180.0°
C04	C05	C06	C07	0.2°	0.3°
C05	C04	C03	H18	179.8°	180.0°
C04	C05	C06	H20	179.8°	180.0°
C03	C02	C01	C07	179.6°	179.7°
C03	C02	C07	C06	0.3°	0.5°
C03	C02	C07	C08	179.7°	179.7°
C03	C02	C01	H15	89.8°	89.8°
C03	C02	C01	H16	150.2°	30.2°
C03	C02	C01	H17	30.2°	150.2°
C05	C06	C07	C02	0.2°	0.6°
C05	C06	C07	H20	180.0°	179.7°
C05	C06	C07	C08	179.9°	179.6°
C01	C02	C07	C06	180.0°	179.7°
C01	C02	C07	C08	0.1°	0.1°
C02	C01	H15	H16	120.0°	120.0°
C02	C01	H15	H17	120.0°	120.0°
C02	C01	H16	H17	120.0°	120.0°
C01	C02	C03	H18	0.2°	0.0°
C02	C07	C06	C08	179.9°	179.8°
C02	C07	C08	N09	120.5°	140.5°
C07	C02	C01	H15	89.8°	90.0°
C07	C02	C01	H16	30.2°	150.0°
C07	C02	C01	H17	150.2°	30.0°
C07	C02	C03	H18	179.9°	179.7°
C02	C07	C06	H20	179.8°	179.8°
C06	C07	C08	N09	59.6°	39.3°
C07	C06	C05	H19	179.8°	179.7°
C08	C07	C06	H20	0.1°	0.0°
H1	C12	C13	H2	0.8°	0.0°
H3	C15	C16	H4	0.7°	0.5°
H7	C21	C22	H9	135.2°	172.6°
H7	C21	C22	H10	15.4°	52.5°
H8	C21	C22	H9	16.2°	52.1°
H8	C21	C22	H10	103.7°	68.0°
H11	C24	C25	H13	4.4°	68.1°
H11	C24	C25	H14	114.4°	52.5°
H12	C24	C25	H13	124.1°	52.1°
H12	C24	C25	H14	5.3°	172.7°
H15	C01	H16	H17	120.0°	120.0°
H19	C05	C06	H20	0.2°	0.1°

Release date:	2020-05-06
Definition date:	2019-06-14
Last modified:	2020-05-01
Release status:	REL
Processing site:	RCSB
Derived from:	6PBI