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SummaryGeometryRelated PDB entries

O53

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CASCARsing1.53Å1.53Å
CARCATsing1.53Å1.52Å
CARCAAsing1.51Å1.44Å
CAACADsing1.38Å1.41ÅAromatic
CAACACdoub1.38Å1.39ÅAromatic
CADCAEdoub1.38Å1.39ÅAromatic
CAECAFsing1.38Å1.41ÅAromatic
CACCABsing1.38Å1.39ÅAromatic
CABCAFdoub1.38Å1.40ÅAromatic
CAFCAGsing1.51Å1.42Å
CAGNAIsing1.46Å1.47Å
CAGNAJsing1.47Å1.45Å
NAICAHsing1.35Å1.38Å
CAHOAKdoub1.22Å1.24Å
CAHCAQsing1.47Å1.42Å
CAQCALdoub1.39Å1.40ÅAromatic
CAQCAPsing1.41Å1.40ÅAromatic
CALCAMsing1.39Å1.40ÅAromatic
CAMCANdoub1.38Å1.40ÅAromatic
CANNAOsing1.32Å1.41ÅAromatic
NAOCAPdoub1.32Å1.36ÅAromatic
CAPNAJsing1.39Å1.38Å
CASHAS1sing1.09Å1.10Å
CASHAS2sing1.09Å1.10Å
CASHAS3sing1.09Å1.10Å
CARHARsing1.09Å1.10Å
CATHAT1sing1.09Å1.10Å
CATHAT2sing1.09Å1.10Å
CATHAT3sing1.09Å1.10Å
CADHADsing1.08Å1.08Å
CACHACsing1.08Å1.08Å
CAEHAEsing1.08Å1.08Å
CABHABsing1.08Å1.08Å
CAGHAGsing1.09Å1.10Å
NAIHAIsing0.97Å1.00Å
NAJHAJsing0.97Å1.00Å
CALHALsing1.08Å1.08Å
CAMHAMsing1.08Å1.08Å
CANHANsing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CASCARCAT109.7°109.5°
CASCARCAA113.6°109.5°
CARCASHAS1109.5°109.5°
CARCASHAS2109.4°109.5°
CARCASHAS3109.5°109.5°
CASCARHAR107.3°109.5°
CATCARCAA109.9°109.4°
CATCARHAR107.5°109.4°
CARCATHAT1109.5°109.5°
CARCATHAT2109.5°109.5°
CARCATHAT3109.5°109.4°
CARCAACAD123.9°120.0°
CARCAACAC118.7°120.0°
CAACARHAR108.6°109.5°
CADCAACAC117.3°120.0°
CAACADCAE121.0°120.0°
CAACADHAD119.5°120.0°
CAACACCAB122.3°120.0°
CAACACHAC118.9°120.0°
CADCAECAF120.6°120.0°
CAECADHAD119.5°120.0°
CADCAEHAE119.7°120.0°
CAECAFCAB117.8°120.0°
CAECAFCAG122.3°120.0°
CAFCAEHAE119.7°120.0°
CACCABCAF120.8°120.0°
CABCACHAC118.9°120.0°
CACCABHAB119.6°120.0°
CABCAFCAG119.2°120.0°
CAFCABHAB119.6°120.0°
CAFCAGNAI120.0°109.3°
CAFCAGNAJ117.8°109.3°
CAFCAGHAG102.5°109.3°
NAICAGNAJ109.2°110.3°
CAGNAICAH121.3°121.0°
NAICAGHAG101.9°109.3°
CAGNAIHAI119.4°119.5°
CAGNAJCAP117.7°118.6°
NAJCAGHAG102.1°109.2°
CAGNAJHAJ107.4°120.7°
NAICAHOAK118.4°120.5°
NAICAHCAQ119.1°119.1°
CAHNAIHAI119.4°119.5°
OAKCAHCAQ122.5°120.5°
CAHCAQCAL122.3°122.0°
CAHCAQCAP118.5°118.7°
CALCAQCAP119.2°119.3°
CAQCALCAM119.5°117.9°
CAQCALHAL120.3°121.0°
CAQCAPNAO121.7°120.4°
CAQCAPNAJ120.2°117.7°
CALCAMCAN120.5°119.6°
CAMCALHAL120.3°121.1°
CALCAMHAM119.7°120.2°
CAMCANNAO119.4°121.5°
CANCAMHAM119.8°120.2°
CAMCANHAN120.3°119.3°
CANNAOCAP119.7°121.4°
NAOCANHAN120.3°119.3°
NAOCAPNAJ118.1°121.9°
CAPNAJHAJ107.4°120.7°
HAS1CASHAS2109.5°109.5°
HAS1CASHAS3109.5°109.4°
HAS2CASHAS3109.5°109.5°
HAT1CATHAT2109.5°109.6°
HAT1CATHAT3109.5°109.4°
HAT2CATHAT3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CASCARCATCAA125.6°120.0°
CASCARCATHAR116.4°120.0°
CASCARCAAHAR119.3°120.0°
CASCARCAACAD65.1°120.0°
CASCARCAACAC115.5°60.3°
CARCASHAS1HAS2120.0°120.0°
CARCASHAS1HAS3120.0°120.0°
CARCASHAS2HAS3120.0°120.0°
CASCARCATHAT1180.0°59.9°
CASCARCATHAT260.0°180.0°
CASCARCATHAT360.0°60.0°
CATCARCAAHAR117.3°119.9°
CATCARCAACAD58.2°120.0°
CATCARCAACAC121.2°59.8°
CATCARCASHAS1180.0°180.0°
CATCARCASHAS260.0°60.0°
CATCARCASHAS360.0°60.0°
CARCATHAT1HAT2120.0°120.1°
CARCATHAT1HAT3120.0°119.9°
CARCATHAT2HAT3120.0°120.0°
CARCAACADCAC179.4°179.8°
CARCAACADCAE179.7°180.0°
CARCAACACCAB179.4°180.0°
CAACARCASHAS156.5°60.0°
CAACARCASHAS2176.5°60.0°
CAACARCASHAS363.5°180.0°
CAACARCATHAT154.4°60.1°
CAACARCATHAT265.6°60.0°
CAACARCATHAT3174.4°180.0°
CARCAACADHAD0.3°0.0°
CARCAACACHAC0.6°0.0°
CAACADCAEHAD180.0°180.0°
CAACADCAECAF2.4°0.0°
CADCAACACCAB1.1°0.3°
CADCAACARHAR175.6°0.0°
CADCAACACHAC178.9°179.7°
CAACADCAEHAE177.6°179.9°
CACCAACADCAE0.3°0.3°
CAACACCABHAC180.0°180.0°
CAACACCABCAF0.8°0.0°
CACCAACARHAR3.9°179.7°
CACCAACADHAD179.7°179.8°
CAACACCABHAB179.3°180.0°
CADCAECAFHAE180.0°179.9°
CADCAECAFCAB4.2°0.3°
CADCAECAFCAG174.2°180.0°
CAECAFCABCAC3.4°0.3°
CAECAFCABCAG170.4°179.7°
CAECAFCAGNAI30.9°30.1°
CAECAFCAGNAJ168.0°150.9°
CAFCAECADHAD177.6°180.0°
CAECAFCABHAB176.7°179.7°
CAECAFCAGHAG80.9°89.6°
CACCABCAFHAB180.0°180.0°
CACCABCAFCAG173.7°180.0°
CABCAFCAGNAI159.1°150.2°
CABCAFCAGNAJ22.0°29.4°
CAFCABCACHAC179.3°180.0°
CABCAFCAEHAE175.8°179.8°
CABCAFCAGHAG89.0°90.1°
CAFCAGNAINAJ140.4°120.3°
CAFCAGNAIHAG112.1°119.6°
CAFCAGNAJHAG111.3°119.6°
CAFCAGNAICAH173.9°89.1°
CAFCAGNAJCAP174.9°75.5°
CAGCAFCAEHAE5.7°0.1°
CAGCAFCABHAB6.3°0.0°
CAFCAGNAIHAI6.1°90.9°
CAFCAGNAJHAJ53.8°104.5°
NAICAGNAJHAG107.4°120.2°
CAGNAICAHHAI180.0°180.0°
CAGNAICAHOAK174.1°176.4°
CAGNAICAHCAQ8.8°3.6°
NAICAGNAJCAP43.7°44.8°
NAICAGNAJHAJ164.9°135.3°
NAJCAGNAICAH33.6°31.1°
CAGNAJCAPCAQ30.3°29.8°
CAGNAJCAPNAO152.0°149.9°
CAGNAJCAPHAJ121.2°180.0°
NAJCAGNAIHAI146.4°148.9°
NAICAHOAKCAQ177.0°180.0°
NAICAHCAQCAL169.1°166.0°
NAICAHCAQCAP8.5°14.0°
CAHNAICAGHAG74.0°151.2°
OAKCAHCAQCAL14.0°13.9°
OAKCAHCAQCAP168.4°166.0°
OAKCAHNAIHAI5.9°3.7°
CAHCAQCALCAP177.5°179.9°
CAHCAQCALCAM179.6°179.7°
CAHCAQCAPNAO179.8°179.6°
CAHCAQCAPNAJ2.2°0.7°
CAQCAHNAIHAI171.2°176.3°
CAHCAQCALHAL0.4°0.3°
CAQCALCAMHAL180.0°180.0°
CAQCALCAMCAN0.6°0.0°
CALCAQCAPNAO2.6°0.3°
CALCAQCAPNAJ179.9°179.3°
CAQCALCAMHAM179.4°180.0°
CAPCAQCALCAM2.0°0.2°
CAQCAPNAOCAN1.6°0.2°
CAQCAPNAONAJ177.6°179.6°
CAQCAPNAJHAJ151.5°150.3°
CAPCAQCALHAL178.0°179.8°
CALCAMCANHAM180.0°180.0°
CALCAMCANNAO0.4°0.2°
CALCAMCANHAN179.6°179.8°
CAMCANNAOHAN180.0°180.0°
CAMCANNAOCAP0.1°0.1°
CANCAMCALHAL179.4°179.9°
CANNAOCAPNAJ179.2°179.5°
NAOCANCAMHAM179.6°179.8°
NAOCAPNAJHAJ30.9°30.1°
CAPNAOCANHAN179.9°179.9°
CAPNAJCAGHAG63.7°165.0°
HAS1CASHAS2HAS3120.0°120.0°
HAS1CASCARHAR63.5°60.0°
HAS2CASCARHAR56.5°180.0°
HAS3CASCARHAR176.5°60.0°
HARCARCATHAT163.6°179.9°
HARCARCATHAT2176.4°60.0°
HARCARCATHAT356.4°60.0°
HAT1CATHAT2HAT3120.0°120.0°
HADCADCAEHAE2.4°0.0°
HACCACCABHAB0.7°0.0°
HAGCAGNAIHAI106.0°28.8°
HAGCAGNAJHAJ57.5°15.1°
HALCALCAMHAM0.6°0.0°
HAMCAMCANHAN0.4°0.2°

222415

PDB entries from 2024-07-10

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