Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

O1J

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C7C6doub1.38Å1.38ÅAromatic
C7C8sing1.38Å1.36ÅAromatic
C6C5sing1.38Å1.37ÅAromatic
C8C3doub1.38Å1.38ÅAromatic
C5C4doub1.38Å1.38ÅAromatic
C3C4sing1.38Å1.38ÅAromatic
C3C2sing1.51Å1.49Å
C2O2sing1.43Å1.36Å
O2C1sing1.43Å1.39Å
C1Csing1.51Å1.55Å
CO1doub1.21Å1.24Å
COsing1.34Å1.26Å
C4H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C7H4sing1.08Å1.08Å
C8H5sing1.08Å1.08Å
OH6sing0.97Å0.95Å
C1H7sing1.09Å1.10Å
C1H8sing1.09Å1.10Å
C2H9sing1.09Å1.10Å
C2H10sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6C7C8120.9°120.1°
C7C6C5119.7°119.9°
C7C6H3120.1°120.1°
C6C7H4119.5°120.0°
C7C8C3119.9°120.0°
C8C7H4119.6°120.0°
C7C8H5120.1°120.1°
C6C5C4119.7°120.0°
C6C5H2120.1°119.9°
C5C6H3120.1°120.0°
C8C3C4119.9°120.0°
C8C3C2119.1°120.0°
C3C8H5120.1°120.0°
C5C4C3119.8°120.0°
C5C4H1120.1°120.0°
C4C5H2120.1°120.0°
C4C3C2120.6°120.0°
C3C4H1120.1°120.0°
C3C2O2108.9°109.5°
C3C2H9109.6°109.5°
C3C2H10109.6°109.5°
C2O2C1113.2°114.1°
O2C2H9109.6°109.5°
O2C2H10109.6°109.5°
O2C1C103.4°109.5°
O2C1H7111.0°109.5°
O2C1H8111.0°109.5°
C1CO1115.8°119.9°
C1CO114.8°120.0°
CC1H7111.0°109.5°
CC1H8111.0°109.4°
O1CO129.4°120.1°
COH6109.5°117.0°
H7C1H8109.5°109.4°
H9C2H10109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6C7C8H4180.0°180.0°
C7C6C5H3180.0°180.0°
C6C7C8C31.2°0.3°
C7C6C5C40.0°0.1°
C7C6C5H2179.9°180.0°
C6C7C8H5178.8°180.0°
C8C7C6C50.2°0.1°
C7C8C3H5180.0°179.8°
C7C8C3C42.1°0.6°
C7C8C3C2171.2°180.0°
C8C7C6H3179.8°180.0°
C6C5C4H2180.0°179.9°
C6C5C4C30.9°0.2°
C6C5C4H1179.1°180.0°
C5C6C7H4179.8°180.0°
C8C3C4C51.9°0.6°
C8C3C4C2173.2°179.4°
C8C3C2O293.0°90.0°
C8C3C4H1178.1°179.6°
C3C8C7H4178.8°179.7°
C8C3C2H926.9°150.0°
C8C3C2H10147.1°30.0°
C5C4C3H1180.0°179.8°
C5C4C3C2171.3°180.0°
C4C5C6H3180.0°180.0°
C4C3C2O293.8°90.6°
C3C4C5H2179.1°179.7°
C4C3C8H5177.9°179.7°
C4C3C2H9146.3°29.5°
C4C3C2H1026.1°149.4°
C3C2O2H9119.9°120.0°
C3C2O2H10119.9°120.0°
C3C2O2C191.7°180.0°
C2C3C4H18.7°0.2°
C2C3C8H58.8°0.2°
C3C2H9H10120.3°120.0°
C2O2C1C144.1°180.0°
C2O2C1H725.1°60.0°
C2O2C1H896.8°60.0°
O2C2H9H10120.3°120.0°
O2C1CH7119.0°120.0°
O2C1CH8119.0°120.0°
O2C1CO137.9°0.0°
O2C1CO141.1°180.0°
O2C1H7H8122.8°120.0°
C1O2C2H928.2°60.0°
C1O2C2H10148.4°60.0°
C1CO1O178.8°179.9°
C1COH6178.8°180.0°
CC1H7H8122.8°120.0°
O1COH60.0°0.1°
O1CC1H781.2°120.0°
O1CC1H8156.9°120.1°
OCC1H799.9°60.0°
OCC1H822.1°60.0°
H1C4C5H20.9°0.1°
H2C5C6H30.0°0.1°
H3C6C7H40.2°0.0°
H4C7C8H51.2°0.0°

221716

PDB entries from 2024-06-26

PDB statisticsPDBj update infoContact PDBjnumon