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NY5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C6doub1.21Å1.26Å
C6Osing1.35Å1.25Å
C6C5sing1.48Å1.52Å
C4C5doub1.39Å1.40ÅAromatic
C4C3sing1.39Å1.40ÅAromatic
C5Csing1.40Å1.40ÅAromatic
C7C3sing1.51Å1.48Å
C7C8sing1.53Å1.50Å
C3C2doub1.38Å1.45ÅAromatic
CC1doub1.38Å1.40ÅAromatic
C2C1sing1.39Å1.40ÅAromatic
C2C10sing1.51Å1.53Å
C8C9sing1.53Å1.51Å
C9C10sing1.53Å1.53Å
C1H1sing1.08Å1.08Å
C4H2sing1.08Å1.08Å
C10H9sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
OH11sing0.97Å0.95Å
CHsing1.08Å1.08Å
C7H4sing1.09Å1.10Å
C7H3sing1.09Å1.10Å
C8H5sing1.09Å1.10Å
C8H6sing1.09Å1.10Å
C9H8sing1.09Å1.10Å
C9H7sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C6O126.9°120.0°
O1C6C5117.0°120.1°
OC6C5116.1°120.0°
C6OH11109.5°117.0°
C6C5C4120.3°120.3°
C6C5C118.8°120.3°
C5C4C3118.9°120.4°
C4C5C120.9°119.4°
C5C4H2120.5°119.8°
C4C3C7119.2°117.6°
C4C3C2120.6°119.8°
C3C4H2120.5°119.8°
C5CC1121.1°119.6°
C5CH119.5°120.2°
C3C7C8114.3°110.6°
C7C3C2120.2°122.6°
C3C7H4108.3°109.3°
C3C7H3108.3°109.2°
C7C8C9109.9°108.4°
C8C7H4108.3°109.2°
C8C7H3108.2°109.3°
C7C8H5109.4°109.7°
C7C8H6109.4°109.7°
C3C2C1118.7°119.9°
C3C2C10121.1°122.5°
CC1C2119.9°120.8°
CC1H1120.1°119.6°
C1CH119.5°120.2°
C1C2C10120.0°117.6°
C2C1H1120.1°119.6°
C2C10C9112.0°110.6°
C2C10H9108.8°109.2°
C2C10H10108.8°109.2°
C8C9C10111.5°108.4°
C9C8H5109.4°109.7°
C9C8H6109.4°109.6°
C8C9H8109.0°109.7°
C8C9H7108.9°109.7°
C9C10H9108.8°109.3°
C9C10H10108.9°109.3°
C10C9H8109.0°109.7°
C10C9H7108.9°109.7°
H9C10H10109.5°109.2°
H4C7H3109.5°109.2°
H5C8H6109.5°109.7°
H8C9H7109.5°109.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C6OC5179.0°180.0°
O1C6C5C455.0°0.0°
O1C6C5C122.7°179.7°
O1C6OH110.0°0.0°
OC6C5C4126.0°180.0°
OC6C5C56.4°0.3°
C6C5C4C177.6°179.7°
C6C5C4C3177.2°180.0°
C6C5CC1176.6°179.6°
C6C5C4H22.8°0.4°
C5C6OH11178.9°180.0°
C6C5CH3.4°0.1°
C5C4C3H2180.0°179.7°
C5C4C3C7179.4°179.4°
C5C4C3C20.2°0.2°
C4C5CC11.0°0.7°
C4C5CH179.0°179.8°
C3C4C5C0.4°0.3°
C4C3C7C2179.2°179.6°
C4C3C7C8157.7°162.6°
C4C3C2C10.5°0.3°
C4C3C2C10175.0°179.5°
C4C3C7H481.6°77.1°
C4C3C7H337.0°42.3°
C5CC1H180.0°179.5°
C5CC1C21.4°0.6°
C5CC1H1178.6°179.7°
CC5C4H2179.6°179.9°
C3C7C8H4120.7°120.3°
C3C7C8H3120.7°120.3°
C7C3C2C1179.7°179.2°
C7C3C2C104.3°0.9°
C3C7C8C950.8°51.1°
C7C3C4H20.6°1.0°
C3C7H4H3117.8°119.4°
C3C7C8H5170.9°170.8°
C3C7C8H669.3°68.6°
C8C7C3C221.6°17.9°
C7C8C9H5120.1°119.8°
C7C8C9H6120.0°119.7°
C7C8C9C1064.1°69.9°
C8C7H4H3117.8°119.4°
C7C8H5H6119.8°120.6°
C7C8C9H856.2°170.4°
C7C8C9H7175.6°49.9°
C3C2C1C1.1°0.1°
C3C2C1C10175.5°179.9°
C3C2C10C916.3°18.0°
C3C2C1H1178.9°179.8°
C2C3C4H2179.8°179.4°
C3C2C10H9104.1°102.4°
C3C2C10H10136.7°138.2°
C2C3C7H499.1°102.4°
C2C3C7H3142.3°138.2°
CC1C2H1180.0°179.7°
CC1C2C10174.4°179.9°
C1C2C10C9168.3°162.2°
C1C2C10H971.4°77.5°
C1C2C10H1047.9°41.9°
C2C1CH178.6°179.9°
C2C10C9C845.7°51.2°
C2C10C9H9120.4°120.3°
C2C10C9H10120.4°120.2°
C10C2C1H15.6°0.3°
C2C10H9H10118.8°119.4°
C2C10C9H874.6°170.9°
C2C10C9H7166.1°68.5°
C8C9C10H8120.3°119.7°
C8C9C10H7120.3°119.8°
C8C9C10H974.6°69.0°
C8C9C10H10166.1°171.5°
C9C8C7H469.9°69.2°
C9C8C7H3171.5°171.4°
C9C8H5H6119.8°120.5°
C8C9H8H7119.0°120.5°
C9C10H9H10118.9°119.5°
C10C9C8H5175.8°170.3°
C10C9C8H656.0°49.8°
C10C9H8H7119.0°120.6°
H1C1CH1.4°0.2°
H9C10C9H8165.1°50.7°
H9C10C9H745.7°171.2°
H10C10C9H845.8°68.8°
H10C10C9H773.5°51.7°
H4C7C8H550.1°50.5°
H4C7C8H6170.0°171.1°
H3C7C8H568.4°68.9°
H3C7C8H651.4°51.7°
H5C8C9H863.8°50.6°
H5C8C9H755.5°69.9°
H6C8C9H8176.3°69.9°
H6C8C9H764.3°169.6°

222415

PDB entries from 2024-07-10

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