NVA
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.45Å | |
N | H | sing | 1.01Å | 1.02Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | C | sing | 1.51Å | 1.52Å | |
CA | HA | sing | 1.09Å | 1.12Å | |
CB | CG | sing | 1.53Å | 1.56Å | |
CB | HB2 | sing | 1.09Å | 1.12Å | |
CB | HB3 | sing | 1.09Å | 1.12Å | |
CG | CD | sing | 1.53Å | 1.51Å | |
CG | HG2 | sing | 1.09Å | 1.12Å | |
CG | HG3 | sing | 1.09Å | 1.11Å | |
CD | HD1 | sing | 1.09Å | 1.11Å | |
CD | HD2 | sing | 1.09Å | 1.11Å | |
CD | HD3 | sing | 1.09Å | 1.12Å | |
C | O | doub | 1.21Å | 1.23Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 110.2° | 106.7° |
CA | N | H2 | 112.0° | 106.7° |
N | CA | CB | 110.3° | 109.4° |
N | CA | C | 113.2° | 109.4° |
N | CA | HA | 106.1° | 109.5° |
H | N | H2 | 111.9° | 106.7° |
CB | CA | C | 108.6° | 109.5° |
CB | CA | HA | 110.9° | 109.5° |
CA | CB | CG | 105.7° | 109.5° |
CA | CB | HB2 | 113.6° | 109.4° |
CA | CB | HB3 | 113.6° | 109.5° |
C | CA | HA | 107.7° | 109.5° |
CA | C | O | 120.6° | 120.1° |
CA | C | OXT | 115.2° | 120.0° |
CG | CB | HB2 | 113.7° | 109.4° |
CG | CB | HB3 | 113.7° | 109.4° |
CB | CG | CD | 111.2° | 109.5° |
CB | CG | HG2 | 111.5° | 109.5° |
CB | CG | HG3 | 111.5° | 109.4° |
HB2 | CB | HB3 | 96.8° | 109.5° |
CD | CG | HG2 | 111.6° | 109.5° |
CD | CG | HG3 | 111.6° | 109.5° |
CG | CD | HD1 | 111.1° | 109.5° |
CG | CD | HD2 | 111.5° | 109.5° |
CG | CD | HD3 | 111.6° | 109.5° |
HG2 | CG | HG3 | 98.8° | 109.4° |
HD1 | CD | HD2 | 111.7° | 109.4° |
HD1 | CD | HD3 | 111.6° | 109.5° |
HD2 | CD | HD3 | 98.8° | 109.4° |
O | C | OXT | 124.2° | 119.9° |
C | OXT | HXT | 115.2° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 125.3° | 113.8° |
N | CA | CB | C | 124.5° | 120.0° |
N | CA | CB | HA | 117.2° | 120.0° |
N | CA | C | HA | 117.0° | 120.0° |
N | CA | CB | CG | 74.0° | 60.0° |
N | CA | CB | HB2 | 51.3° | 180.0° |
N | CA | CB | HB3 | 160.7° | 60.0° |
N | CA | C | O | 45.6° | 30.0° |
N | CA | C | OXT | 134.6° | 150.1° |
H | N | CA | CB | 180.0° | 53.8° |
H | N | CA | C | 58.1° | 173.8° |
H | N | CA | HA | 59.9° | 66.1° |
H2 | N | CA | CB | 54.8° | 60.0° |
H2 | N | CA | C | 176.6° | 60.0° |
H2 | N | CA | HA | 65.4° | 180.0° |
CB | CA | C | HA | 120.2° | 120.0° |
CA | CB | CG | HB2 | 125.2° | 120.0° |
CA | CB | CG | HB3 | 125.3° | 120.0° |
CA | CB | HB2 | HB3 | 119.5° | 120.0° |
CA | CB | CG | CD | 165.5° | 179.9° |
CA | CB | CG | HG2 | 40.3° | 60.0° |
CA | CB | CG | HG3 | 69.2° | 59.9° |
CB | CA | C | O | 77.2° | 89.9° |
CB | CA | C | OXT | 102.6° | 90.0° |
C | CA | CB | CG | 161.5° | 180.0° |
C | CA | CB | HB2 | 73.3° | 60.1° |
C | CA | CB | HB3 | 36.1° | 60.0° |
CA | C | O | OXT | 179.8° | 179.8° |
CA | C | OXT | HXT | 180.0° | 180.0° |
HA | CA | CB | CG | 43.2° | 60.0° |
HA | CA | CB | HB2 | 168.5° | 60.0° |
HA | CA | CB | HB3 | 82.1° | 180.0° |
HA | CA | C | O | 162.5° | 150.1° |
HA | CA | C | OXT | 17.6° | 30.1° |
CG | CB | HB2 | HB3 | 119.6° | 119.9° |
CB | CG | CD | HG2 | 125.2° | 120.1° |
CB | CG | CD | HG3 | 125.2° | 120.0° |
CB | CG | HG2 | HG3 | 117.4° | 119.9° |
CB | CG | CD | HD1 | 180.0° | 180.0° |
CB | CG | CD | HD2 | 54.7° | 60.0° |
CB | CG | CD | HD3 | 54.7° | 59.9° |
HB2 | CB | CG | CD | 69.2° | 60.0° |
HB2 | CB | CG | HG2 | 165.5° | 180.0° |
HB2 | CB | CG | HG3 | 56.0° | 60.1° |
HB3 | CB | CG | CD | 40.3° | 60.0° |
HB3 | CB | CG | HG2 | 85.0° | 60.1° |
HB3 | CB | CG | HG3 | 165.5° | 180.0° |
CD | CG | HG2 | HG3 | 117.6° | 120.0° |
CG | CD | HD1 | HD2 | 125.2° | 120.0° |
CG | CD | HD1 | HD3 | 125.2° | 120.1° |
CG | CD | HD2 | HD3 | 117.5° | 120.0° |
HG2 | CG | CD | HD1 | 54.7° | 59.9° |
HG2 | CG | CD | HD2 | 179.9° | 60.0° |
HG2 | CG | CD | HD3 | 70.5° | 180.0° |
HG3 | CG | CD | HD1 | 54.8° | 60.0° |
HG3 | CG | CD | HD2 | 70.5° | 180.0° |
HG3 | CG | CD | HD3 | 179.9° | 60.1° |
HD1 | CD | HD2 | HD3 | 117.5° | 120.0° |
O | C | OXT | HXT | 0.2° | 0.1° |