Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

NV5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N3N2doub1.29Å1.29ÅAromatic
N3C9sing1.33Å1.34ÅAromatic
C10S1sing1.81Å1.79Å
C10C11sing1.51Å1.51Å
S1C9sing1.76Å1.75Å
N2C8sing1.33Å1.33ÅAromatic
C18C17doub1.38Å1.38ÅAromatic
C18C19sing1.39Å1.38ÅAromatic
C9N6doub1.33Å1.33ÅAromatic
C21C22doub1.38Å1.39ÅAromatic
C21C15sing1.39Å1.38ÅAromatic
C17C16sing1.39Å1.38ÅAromatic
C22C12sing1.39Å1.39ÅAromatic
C19C20doub1.38Å1.38ÅAromatic
C8C7sing1.47Å1.44ÅAromatic
C8C23doub1.41Å1.39ÅAromatic
C11O1doub1.21Å1.22Å
C11N4sing1.35Å1.34Å
C6C7doub1.39Å1.39ÅAromatic
C6C5sing1.38Å1.38ÅAromatic
C16O2sing1.36Å1.37Å
C16N5doub1.32Å1.31ÅAromatic
N6C23sing1.33Å1.34ÅAromatic
C20N5sing1.32Å1.35ÅAromatic
C7C2sing1.40Å1.41ÅAromatic
O2C15sing1.36Å1.40Å
C15C14doub1.39Å1.38ÅAromatic
C23N1sing1.37Å1.38ÅAromatic
C12N4sing1.40Å1.42Å
C12C13doub1.39Å1.39ÅAromatic
C5C4doub1.39Å1.40ÅAromatic
C2N1sing1.39Å1.38ÅAromatic
C2C3doub1.39Å1.39ÅAromatic
N1C1sing1.46Å1.45Å
C14C13sing1.38Å1.38ÅAromatic
C4C3sing1.38Å1.38ÅAromatic
C4H1sing1.08Å1.08Å
C5H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
C10H4sing1.09Å1.10Å
C10H5sing1.09Å1.10Å
C13H6sing1.08Å1.08Å
C17H7sing1.08Å1.08Å
C20H8sing1.08Å1.08Å
C21H9sing1.08Å1.08Å
C22H10sing1.08Å1.08Å
C1H11sing1.09Å1.10Å
C1H12sing1.09Å1.10Å
C1H13sing1.09Å1.10Å
C3H14sing1.08Å1.08Å
C19H15sing1.08Å1.08Å
C14H16sing1.08Å1.08Å
N4H17sing0.97Å1.00Å
C18H18sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
N2N3C9121.0°121.5°
N3N2C8118.2°120.1°
N3C9S1115.1°119.3°
N3C9N6124.8°121.3°
S1C10C11110.8°109.4°
C10S1C9101.2°100.0°
S1C10H4109.1°109.5°
S1C10H5109.1°109.4°
C10C11O1121.3°120.0°
C10C11N4115.0°120.0°
C11C10H4109.1°109.5°
C11C10H5109.1°109.5°
S1C9N6120.0°119.4°
N2C8C7131.6°134.2°
N2C8C23120.3°119.5°
C17C18C19119.8°118.5°
C18C17C16117.2°119.1°
C18C17H7121.4°120.4°
C17C18H18120.1°120.7°
C18C19C20118.1°119.3°
C18C19H15120.9°120.4°
C19C18H18120.1°120.8°
C9N6C23113.9°119.3°
C22C21C15119.5°120.0°
C21C22C12120.5°120.0°
C22C21H9120.3°120.0°
C21C22H10119.7°120.0°
C21C15O2121.2°120.0°
C21C15C14120.7°120.0°
C15C21H9120.2°120.0°
C17C16O2115.7°119.7°
C17C16N5125.0°120.7°
C16C17H7121.4°120.5°
C22C12N4123.5°120.0°
C22C12C13119.0°120.0°
C12C22H10119.7°120.0°
C19C20N5123.0°120.8°
C19C20H8118.5°119.6°
C20C19H15120.9°120.3°
C7C8C23108.1°106.3°
C8C7C6134.3°133.6°
C8C7C2105.6°106.4°
C8C23N6121.7°118.3°
C8C23N1108.3°108.5°
O1C11N4123.6°120.0°
C11N4C12128.3°120.0°
C11N4H17115.9°120.1°
C7C6C5118.6°119.8°
C6C7C2120.1°120.0°
C7C6H3120.7°120.0°
C6C5C4120.9°120.2°
C6C5H2119.5°119.9°
C5C6H3120.7°120.1°
O2C16N5119.2°119.7°
C16O2C15126.0°118.0°
C16N5C20116.9°121.6°
N6C23N1130.0°133.2°
N5C20H8118.5°119.6°
C7C2N1108.8°108.4°
C7C2C3121.3°119.3°
O2C15C14118.1°120.0°
C15C14C13119.8°120.0°
C15C14H16120.1°120.0°
C23N1C2109.2°110.4°
C23N1C1125.8°124.8°
N4C12C13117.5°120.0°
C12N4H17115.9°119.9°
C12C13C14120.5°120.0°
C12C13H6119.7°120.0°
C5C4C3121.6°120.6°
C5C4H1119.2°119.7°
C4C5H2119.6°119.9°
N1C2C3129.9°132.3°
C2N1C1125.0°124.8°
C2C3C4117.6°120.1°
C2C3H14121.2°120.0°
N1C1H11109.5°109.5°
N1C1H12109.4°109.4°
N1C1H13109.5°109.5°
C14C13H6119.7°120.1°
C13C14H16120.1°120.0°
C3C4H1119.2°119.7°
C4C3H14121.2°120.0°
H4C10H5109.5°109.5°
H11C1H12109.5°109.5°
H11C1H13109.4°109.5°
H12C1H13109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
N2N3C9S1179.7°180.0°
N2N3C9N60.7°0.1°
N3N2C8C7179.5°180.0°
N3N2C8C230.1°0.0°
N3C9S1C10130.4°0.0°
N3C9S1N6179.7°179.9°
C9N3N2C80.6°0.0°
N3C9N6C230.2°0.1°
S1C10C11H4120.2°120.0°
S1C10C11H5120.2°119.9°
C10S1C9N649.3°180.0°
S1C10C11O177.5°0.0°
S1C10C11N4102.1°180.0°
S1C10H4H5119.4°120.0°
C11C10S1C994.4°180.0°
C10C11O1N4179.6°180.0°
C10C11N4C1277.3°174.2°
C11C10H4H5119.4°120.0°
C10C11N4H17102.6°5.8°
S1C9N6C23179.8°180.0°
C9S1C10H425.8°60.0°
C9S1C10H5145.4°60.0°
N2C8C7C23179.7°180.0°
N2C8C7C60.3°0.1°
N2C8C23N60.4°0.0°
N2C8C7C2179.6°180.0°
N2C8C23N1179.7°180.0°
C17C18C19H18180.0°180.0°
C18C17C16H7180.0°179.7°
C17C18C19C200.1°0.5°
C18C17C16O2179.2°179.7°
C18C17C16N50.8°0.3°
C17C18C19H15179.9°179.7°
C19C18C17C160.3°0.0°
C18C19C20H15180.0°179.1°
C18C19C20N50.0°0.8°
C19C18C17H7179.7°179.7°
C18C19C20H8180.0°179.8°
C9N6C23C80.4°0.1°
C9N6C23N1179.7°180.0°
C22C21C15H9180.0°179.7°
C21C22C12H10180.0°179.7°
C22C21C15O2178.9°179.7°
C22C21C15C140.9°0.3°
C21C22C12N4178.6°180.0°
C21C22C12C130.1°0.0°
C15C21C22C120.5°0.3°
C21C15O2C1653.7°114.5°
C21C15O2C14178.0°179.9°
C21C15C14C130.8°0.0°
C15C21C22H10179.5°180.0°
C21C15C14H16179.2°180.0°
C17C16O2N5178.5°180.0°
C17C16N5C200.8°0.0°
C17C16O2C15145.2°174.9°
C16C17C18H18179.7°180.0°
C22C12N4C118.2°26.1°
C22C12N4C13178.7°180.0°
C22C12C13C140.0°0.3°
C22C12C13H6180.0°180.0°
C12C22C21H9179.4°179.9°
C22C12N4H17171.8°153.9°
C19C20N5C160.4°0.6°
C19C20N5H8180.0°179.4°
C20C19C18H18179.9°179.5°
C8C7C6C2179.9°180.0°
C8C7C6C5179.9°179.9°
C7C8C23N6179.9°180.0°
C7C8C23N10.1°0.0°
C8C7C2N10.1°0.0°
C8C7C2C3179.9°179.9°
C8C7C6H30.1°0.0°
C23C8C7C6180.0°180.0°
C8C23N6N1179.9°180.0°
C23C8C7C20.1°0.0°
C8C23N1C20.0°0.0°
C8C23N1C1179.9°180.0°
O1C11N4C12103.1°5.9°
O1C11C10H4162.3°120.0°
O1C11C10H542.7°120.0°
O1C11N4H1777.0°174.1°
C11N4C12H17180.0°180.0°
C11N4C12C13173.1°154.0°
N4C11C10H418.1°60.0°
N4C11C10H5137.7°60.0°
C7C6C5H3180.0°180.0°
C7C6C5C40.0°0.0°
C6C7C2N1180.0°180.0°
C6C7C2C30.0°0.0°
C7C6C5H2180.0°180.0°
C5C6C7C20.0°0.0°
C6C5C4H2180.0°180.0°
C6C5C4C30.0°0.1°
C6C5C4H1180.0°179.8°
O2C16N5C20179.1°180.0°
C16O2C15C14128.3°65.4°
O2C16C17H70.8°0.0°
N5C16O2C1536.3°5.1°
N5C16C17H7179.2°180.0°
C16N5C20H8179.6°180.0°
N6C23N1C2179.9°180.0°
N6C23N1C10.0°0.0°
N5C20C19H15180.0°180.0°
C7C2N1C230.0°0.0°
C7C2N1C3180.0°179.9°
C7C2N1C1179.8°180.0°
C7C2C3C40.0°0.1°
C2C7C6H3180.0°180.0°
C7C2C3H14180.0°179.7°
O2C15C14C13178.9°180.0°
O2C15C21H91.1°0.0°
O2C15C14H161.1°0.1°
C15C14C13C120.4°0.3°
C15C14C13H16180.0°180.0°
C15C14C13H6179.7°180.0°
C14C15C21H9179.1°179.9°
C23N1C2C1179.9°180.0°
C23N1C2C3179.9°179.9°
C23N1C1H11180.0°90.0°
C23N1C1H1260.0°30.0°
C23N1C1H1360.0°149.9°
N4C12C13C14178.7°179.7°
N4C12C13H61.2°0.1°
N4C12C22H101.4°0.3°
C12C13C14H6180.0°179.6°
C13C12C22H10179.9°179.7°
C12C13C14H16179.6°179.7°
C13C12N4H176.9°26.0°
C5C4C3C20.0°0.1°
C5C4C3H1180.0°179.8°
C4C5C6H3180.0°180.0°
C5C4C3H14180.0°179.7°
N1C2C3C4180.0°180.0°
C2N1C1H110.1°90.0°
C2N1C1H12120.1°150.0°
C2N1C1H13119.9°30.0°
N1C2C3H140.0°0.4°
C3C2N1C10.2°0.1°
C2C3C4H14180.0°179.6°
C2C3C4H1180.0°179.8°
N1C1H11H12120.0°120.0°
N1C1H11H13120.0°120.0°
N1C1H12H13120.0°120.0°
C3C4C5H2180.0°179.9°
H1C4C5H20.0°0.2°
H1C4C3H140.0°0.2°
H2C5C6H30.0°0.0°
H6C13C14H160.3°0.1°
H7C17C18H180.3°0.2°
H8C20C19H150.0°0.6°
H9C21C22H100.5°0.3°
H11C1H12H13120.0°120.0°
H15C19C18H180.1°0.4°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon