Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

NTU

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2'S1'sing1.81Å1.82Å
C2'H2'1sing1.09Å1.10Å
C2'H2'2sing1.09Å1.10Å
C2'H2'3sing1.09Å1.10Å
S1'C1'sing1.78Å1.79Å
N1C1'doub1.29Å1.36Å
N1C1sing1.46Å1.46Å
N2C1'sing1.37Å1.34Å
N2HN21sing1.01Å1.00Å
N2HN22sing1.01Å1.00Å
C1C2sing1.53Å1.53Å
C1H11sing1.09Å1.10Å
C1H12sing1.10Å1.10Å
C2C3sing1.53Å1.58Å
C2H21sing1.10Å1.10Å
C2H22sing1.10Å1.10Å
C3C4sing1.53Å1.56Å
C3H31sing1.10Å1.10Å
C3H32sing1.10Å1.10Å
C4C5sing1.53Å64.71Å
C4H41sing1.10Å1.10Å
C4H42sing1.10Å1.10Å
C5C6sing1.53Å0.00Å
C5H51sing1.09Å0.00Å
C5H52sing1.10Å0.00Å
C6C7sing1.53Å0.00Å
C6H61sing1.10Å0.00Å
C6H62sing1.10Å0.00Å
C7C8sing1.53Å0.00Å
C7H71sing1.10Å0.00Å
C7H72sing1.10Å0.00Å
C8C9sing1.53Å0.00Å
C8H81sing1.10Å0.00Å
C8H82sing1.10Å0.00Å
C9C10sing1.53Å0.00Å
C9H91sing1.10Å0.00Å
C9H92sing1.10Å0.00Å
C10C11sing1.53Å0.00Å
C10H101sing1.10Å0.00Å
C10H102sing1.10Å0.00Å
C11C12sing1.53Å0.00Å
C11H111sing1.10Å0.00Å
C11H112sing1.10Å0.00Å
C12C13sing1.53Å0.00Å
C12H121sing1.10Å0.00Å
C12H122sing1.10Å0.00Å
C13C14sing1.52Å0.00Å
C13H131sing1.10Å0.00Å
C13H132sing1.10Å0.00Å
C14N3sing1.46Å0.00Å
C14H141sing1.09Å0.00Å
C14H142sing1.09Å0.00Å
C4'S2'sing1.81Å0.00Å
C4'H4'1sing1.09Å0.00Å
C4'H4'2sing1.09Å0.00Å
C4'H4'3sing1.09Å0.00Å
S2'C3'sing1.78Å0.00Å
N3C3'doub1.29Å0.00Å
N4C3'sing1.37Å0.00Å
N4HN41sing1.01Å0.00Å
N4HN42sing1.01Å0.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
S1'C2'H2'1109.5°109.9°
S1'C2'H2'2109.5°109.8°
S1'C2'H2'3109.5°109.9°
C2'S1'C1'108.3°101.7°
H2'1C2'H2'2109.4°109.0°
H2'1C2'H2'3109.5°109.2°
H2'2C2'H2'3109.5°109.1°
S1'C1'N1119.9°117.8°
S1'C1'N2116.0°112.5°
C1'N1C1129.1°116.4°
N1C1'N2124.0°129.7°
N1C1C2114.4°109.8°
N1C1H11107.9°109.7°
N1C1H12106.7°108.7°
C1'N2HN21105.3°120.9°
C1'N2HN22127.3°122.2°
HN21N2HN22127.3°116.9°
C2C1H11107.9°111.0°
C2C1H12106.7°109.7°
C1C2C3117.7°112.3°
C1C2H21106.8°108.5°
C1C2H22104.9°109.2°
H11C1H12113.4°107.8°
C3C2H21106.8°109.2°
C3C2H22104.9°110.1°
C2C3C4108.6°113.2°
C2C3H31109.8°109.0°
C2C3H32110.0°110.1°
H21C2H22116.2°107.4°
C4C3H31109.8°108.1°
C4C3H32110.0°109.4°
C3C4C572.3°113.3°
C3C4H41124.4°108.2°
C3C4H42129.5°109.0°
H31C3H32108.8°106.8°
C5C4H41124.4°109.0°
C5C4H42129.5°110.3°
C4C5C690.0°113.3°
C4C5H5190.0°110.3°
C4C5H5290.0°109.1°
H41C4H4283.6°106.8°
C6C5H5190.0°109.5°
C6C5H5290.0°108.0°
C5C6C790.0°115.7°
C5C6H6190.0°108.4°
C5C6H6290.0°108.9°
H51C5H5290.0°106.3°
C7C6H6190.0°108.9°
C7C6H6290.0°108.4°
C6C7C890.0°113.3°
C6C7H7190.0°109.5°
C6C7H7290.0°108.0°
H61C6H6290.0°106.2°
C8C7H7190.0°110.3°
C8C7H7290.0°109.1°
C7C8C990.0°113.3°
C7C8H8190.0°110.2°
C7C8H8290.0°109.0°
H71C7H7290.0°106.3°
C9C8H8190.0°109.1°
C9C8H8290.0°108.2°
C8C9C1090.0°113.3°
C8C9H9190.0°109.6°
C8C9H9290.0°108.1°
H81C8H8290.0°106.9°
C10C9H9190.0°109.8°
C10C9H9290.0°109.1°
C9C10C1190.0°111.2°
C9C10H10190.0°110.1°
C9C10H10290.0°109.6°
H91C9H9290.0°106.7°
C11C10H10190.0°109.1°
C11C10H10290.0°109.5°
C10C11C1290.0°111.2°
C10C11H11190.0°109.6°
C10C11H11290.0°109.1°
H101C10H10290.0°107.3°
C12C11H11190.0°109.6°
C12C11H11290.0°110.0°
C11C12C1390.0°113.3°
C11C12H12190.0°109.0°
C11C12H12290.0°109.8°
H111C11H11290.0°107.3°
C13C12H12190.0°108.2°
C13C12H12290.0°109.6°
C12C13C1490.0°113.4°
C12C13H13190.0°108.4°
C12C13H13290.0°109.8°
H121C12H12290.0°106.8°
C14C13H13190.0°109.0°
C14C13H13290.0°109.7°
C13C14N390.0°108.8°
C13C14H14190.0°111.3°
C13C14H14290.0°110.7°
H131C13H13290.0°106.2°
N3C14H14190.0°108.8°
N3C14H14290.0°109.0°
C14N3C3'90.0°116.4°
H141C14H14290.0°108.2°
S2'C4'H4'190.0°109.9°
S2'C4'H4'290.0°109.9°
S2'C4'H4'390.0°109.9°
C4'S2'C3'90.0°101.6°
H4'1C4'H4'290.0°109.0°
H4'1C4'H4'390.0°109.1°
H4'2C4'H4'390.0°109.1°
S2'C3'N390.0°117.7°
S2'C3'N490.0°112.5°
N3C3'N490.0°129.8°
C3'N4HN4190.0°120.9°
C3'N4HN4290.0°122.2°
HN41N4HN4290.0°116.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
S1'C2'H2'1H2'2120.0°120.4°
S1'C2'H2'1H2'3120.0°120.5°
S1'C2'H2'2H2'3120.0°120.4°
C2'S1'C1'N1154.5°120.0°
C2'S1'C1'N225.8°59.5°
H2'1C2'H2'2H2'3120.0°119.1°
H2'1C2'S1'C1'130.1°140.3°
H2'2C2'S1'C1'109.9°20.4°
H2'3C2'S1'C1'10.1°99.6°
S1'C1'N1N2179.6°179.4°
S1'C1'N1C10.3°0.6°
S1'C1'N2HN210.2°0.2°
S1'C1'N2HN22179.8°179.6°
N1C1'N2HN21179.8°179.6°
N1C1'N2HN220.2°0.2°
C1'N1C1C2138.2°177.8°
C1'N1C1H11101.8°59.9°
C1'N1C1H1220.4°57.8°
C1N1C1'N2180.0°180.0°
N1C1C2H11120.0°121.5°
N1C1C2H12117.8°119.5°
N1C1H11H12118.0°118.3°
N1C1C2C3131.7°61.5°
N1C1C2H21108.3°177.7°
N1C1C2H2215.6°61.0°
C1'N2HN21HN22180.0°179.8°
C2C1H11H12118.0°120.2°
C1C2C3H21120.0°120.4°
C1C2C3H22116.1°121.9°
C1C2H21H22116.6°117.9°
C1C2C3C4126.0°179.5°
C1C2C3H31114.1°60.2°
C1C2C3H325.6°56.7°
H11C1C2C311.7°60.0°
H11C1C2H21131.7°60.8°
H11C1C2H22104.4°177.5°
H12C1C2C3110.5°179.1°
H12C1C2H219.5°58.2°
H12C1C2H22133.4°58.5°
C3C2H21H22116.6°119.4°
C2C3C4H31120.0°120.9°
C2C3C4H32120.4°123.2°
C2C3H31H32120.4°119.0°
C2C3C4C5156.9°179.1°
C2C3C4H4183.1°59.9°
C2C3C4H4229.8°55.9°
H21C2C3C46.0°60.1°
H21C2C3H31126.0°60.3°
H21C2C3H32114.4°177.1°
H22C2C3C4117.9°57.6°
H22C2C3H312.1°177.9°
H22C2C3H32121.7°65.3°
C4C3H31H32120.4°117.6°
C3C4C5H41120.0°120.5°
C3C4C5H42127.0°122.5°
C3C4H41H42134.3°117.2°
C3C4C5C690.0°179.5°
C3C4C5H5190.0°56.3°
C3C4C5H5290.0°60.2°
H31C3C4C536.9°60.0°
H31C3C4H41156.9°61.0°
H31C3C4H4290.2°176.8°
H32C3C4C582.8°55.9°
H32C3C4H4137.3°176.9°
H32C3C4H42150.2°67.3°
C5C4H41H42134.4°119.2°
C4C5C6H5190.0°123.6°
C4C5C6H5290.0°120.9°
C4C5H51H5290.0°118.1°
C4C5C6C790.0°176.3°
C4C5C6H6190.0°53.8°
C4C5C6H6290.0°61.3°
H41C4C5C690.0°60.0°
H41C4C5H5190.0°176.8°
H41C4C5H5290.0°60.4°
H42C4C5C690.0°57.0°
H42C4C5H5190.0°66.2°
H42C4C5H5290.0°177.3°
C6C5H51H5290.0°116.5°
C5C6C7H6190.0°122.3°
C5C6C7H6290.0°122.6°
C5C6H61H6290.0°116.9°
C5C6C7C890.0°177.7°
C5C6C7H7190.0°58.7°
C5C6C7H7290.0°56.7°
H51C5C6C790.0°60.0°
H51C5C6H6190.0°177.4°
H51C5C6H6290.0°62.3°
H52C5C6C790.0°55.4°
H52C5C6H6190.0°67.1°
H52C5C6H6290.0°177.7°
C7C6H61H6290.0°116.5°
C6C7C8H7190.0°123.2°
C6C7C8H7290.0°120.3°
C6C7H71H7290.0°116.4°
C6C7C8C990.0°177.5°
C6C7C8H8190.0°60.0°
C6C7C8H8290.0°57.0°
H61C6C7C890.0°60.0°
H61C6C7H7190.0°63.6°
H61C6C7H7290.0°179.0°
H62C6C7C890.0°55.1°
H62C6C7H7190.0°178.8°
H62C6C7H7290.0°65.8°
C8C7H71H7290.0°118.2°
C7C8C9H8190.0°123.1°
C7C8C9H8290.0°121.0°
C7C8H81H8290.0°118.3°
C7C8C9C1090.0°177.0°
C7C8C9H9190.0°60.0°
C7C8C9H9290.0°55.9°
H71C7C8C990.0°59.3°
H71C7C8H8190.0°63.2°
H71C7C8H8290.0°179.8°
H72C7C8C990.0°57.2°
H72C7C8H8190.0°179.7°
H72C7C8H8290.0°63.3°
C9C8H81H8290.0°116.7°
C8C9C10H9190.0°122.9°
C8C9C10H9290.0°120.5°
C8C9H91H9290.0°116.8°
C8C9C10C1190.0°179.0°
C8C9C10H10190.0°60.0°
C8C9C10H10290.0°57.8°
H81C8C9C1090.0°59.9°
H81C8C9H9190.0°63.1°
H81C8C9H9290.0°179.0°
H82C8C9C1090.0°56.0°
H82C8C9H9190.0°179.0°
H82C8C9H9290.0°65.0°
C10C9H91H9290.0°118.1°
C9C10C11H10190.0°121.6°
C9C10C11H10290.0°121.3°
C9C10H101H10290.0°119.2°
C9C10C11C1290.0°178.7°
C9C10C11H11190.0°60.0°
C9C10C11H11290.0°57.2°
H91C9C10C1190.0°58.1°
H91C9C10H10190.0°62.9°
H91C9C10H10290.0°179.3°
H92C9C10C1190.0°58.6°
H92C9C10H10190.0°179.6°
H92C9C10H10290.0°62.7°
C11C10H101H10290.0°118.6°
C10C11C12H11190.0°121.3°
C10C11C12H11290.0°120.9°
C10C11H111H11290.0°118.3°
C10C11C12C1390.0°179.5°
C10C11C12H12190.0°60.0°
C10C11C12H12290.0°56.6°
H101C10C11C1290.0°57.1°
H101C10C11H11190.0°178.4°
H101C10C11H11290.0°64.4°
H102C10C11C1290.0°60.0°
H102C10C11H11190.0°61.3°
H102C10C11H11290.0°178.5°
C12C11H111H11290.0°119.4°
C11C12C13H12190.0°121.0°
C11C12C13H12290.0°123.0°
C11C12H121H12290.0°118.5°
C11C12C13C1490.0°178.8°
C11C12C13H13190.0°60.0°
C11C12C13H13290.0°55.6°
H111C11C12C1390.0°59.2°
H111C11C12H12190.0°61.3°
H111C11C12H12290.0°177.9°
H112C11C12C1390.0°58.5°
H112C11C12H12190.0°179.0°
H112C11C12H12290.0°64.4°
C13C12H121H12290.0°117.9°
C12C13C14H13190.0°120.9°
C12C13C14H13290.0°123.2°
C12C13H131H13290.0°117.9°
C12C13C14N390.0°60.3°
C12C13C14H14190.0°179.9°
C12C13C14H14290.0°59.5°
H121C12C13C1490.0°60.3°
H121C12C13H13190.0°61.0°
H121C12C13H13290.0°176.6°
H122C12C13C1490.0°55.8°
H122C12C13H13190.0°177.0°
H122C12C13H13290.0°67.4°
C14C13H131H13290.0°118.2°
C13C14N3H14190.0°121.3°
C13C14N3H14290.0°120.8°
C13C14H141H14290.0°121.9°
C13C14N3C3'90.0°178.7°
H131C13C14N390.0°60.6°
H131C13C14H14190.0°59.2°
H131C13C14H14290.0°179.6°
H132C13C14N390.0°176.6°
H132C13C14H14190.0°56.8°
H132C13C14H14290.0°63.7°
N3C14H141H14290.0°118.3°
C14N3C3'S2'90.0°0.7°
C14N3C3'N490.0°180.0°
H141C14N3C3'90.0°59.9°
H142C14N3C3'90.0°57.9°
S2'C4'H4'1H4'290.0°120.5°
S2'C4'H4'1H4'390.0°120.6°
S2'C4'H4'2H4'390.0°120.5°
C4'S2'C3'N390.0°120.0°
C4'S2'C3'N490.0°60.5°
H4'1C4'H4'2H4'390.0°119.0°
H4'1C4'S2'C3'90.0°51.9°
H4'2C4'S2'C3'90.0°171.8°
H4'3C4'S2'C3'90.0°68.2°
S2'C3'N3N490.0°179.3°
S2'C3'N4HN4190.0°0.3°
S2'C3'N4HN4290.0°179.7°
N3C3'N4HN4190.0°179.6°
N3C3'N4HN4290.0°0.3°
C3'N4HN41HN4290.0°179.9°

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon