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NTD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O1C5doub1.21Å1.23Å
C5C2sing1.51Å1.53Å
C5C6sing1.42Å1.39Å
C2C3sing1.53Å1.53Å
C2H21sing1.09Å1.11Å
C2H22sing1.09Å1.12Å
C3C4sing1.53Å1.53Å
C3H31sing1.09Å1.12Å
C3H32sing1.09Å1.11Å
C4C1sing1.51Å1.53Å
C4H41sing1.09Å1.12Å
C4H42sing1.09Å1.12Å
C1O5doub1.21Å1.23Å
C1C6sing1.41Å1.39Å
C6C7doub1.40Å1.53Å
C7O7sing1.35Å1.36Å
C7C8sing1.47Å1.53Å
O7HO7sing0.97Å0.95Å
C8C13doub1.40Å1.39ÅAromatic
C8C9sing1.40Å1.39ÅAromatic
C13C12sing1.38Å1.39ÅAromatic
C13H13sing1.08Å1.10Å
C12C11doub1.38Å1.39ÅAromatic
C12H12sing1.08Å1.10Å
C11C14sing1.51Å1.53Å
C11C10sing1.38Å1.39ÅAromatic
C14F2sing1.40Å1.33Å
C14F3sing1.40Å1.33Å
C14F1sing1.40Å1.33Å
C10C9doub1.38Å1.39ÅAromatic
C10H10sing1.08Å1.10Å
C9Nsing1.48Å1.33Å
NON2doub1.22Å1.41Å
NON1sing1.22Å1.43Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C5C2118.1°119.8°
O1C5C6118.8°119.8°
C2C5C6123.0°120.4°
C5C2C3110.2°109.4°
C5C2H21112.0°109.5°
C5C2H22111.9°109.5°
C5C6C1118.4°120.7°
C5C6C7120.7°119.6°
C3C2H21111.9°109.5°
C3C2H22111.9°109.4°
C2C3C4110.2°109.2°
C2C3H31111.9°109.5°
C2C3H32112.0°109.5°
H21C2H2298.5°109.5°
C4C3H31112.0°109.5°
C4C3H32111.9°109.5°
C3C4C1109.5°109.5°
C3C4H41112.2°109.5°
C3C4H42112.2°109.5°
H31C3H3298.5°109.5°
C1C4H41112.2°109.7°
C1C4H42112.2°109.3°
C4C1O5117.9°119.8°
C4C1C6123.0°120.4°
H41C4H4298.2°109.4°
O5C1C6119.1°119.8°
C1C6C7120.9°119.7°
C6C7O7120.1°120.0°
C6C7C8120.9°120.0°
O7C7C8119.0°120.0°
C7O7HO7120.1°119.9°
C7C8C13119.3°120.1°
C7C8C9120.8°120.2°
C13C8C9119.6°119.7°
C8C13C12120.2°119.7°
C8C13H13120.0°120.1°
C8C9C10120.1°119.8°
C8C9N120.7°120.1°
C12C13H13119.8°120.1°
C13C12C11120.2°120.2°
C13C12H12120.0°119.9°
C11C12H12119.8°119.9°
C12C11C14120.4°119.9°
C12C11C10119.4°120.3°
C14C11C10120.2°119.8°
C11C14F2109.1°109.5°
C11C14F3110.8°109.4°
C11C14F1110.2°109.5°
C11C10C9120.5°120.2°
C11C10H10119.7°119.9°
F2C14F3108.8°109.5°
F2C14F1110.0°109.5°
F3C14F1108.0°109.5°
C9C10H10119.8°119.9°
C10C9N119.2°120.1°
C9NON2120.8°120.0°
C9NON1119.6°120.0°
ON2NON1119.6°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C5C2C6179.4°179.9°
O1C5C2C3155.7°150.3°
O1C5C2H2179.0°30.3°
O1C5C2H2230.5°89.8°
O1C5C6C1176.1°179.8°
O1C5C6C73.6°0.0°
C5C2C3H21125.3°120.0°
C5C2C3H22125.3°120.0°
C5C2H21H22117.9°120.1°
C5C2C3C453.3°58.8°
C5C2C3H31178.6°61.1°
C5C2C3H3272.0°178.7°
C2C5C6C13.3°0.1°
C2C5C6C7177.0°179.9°
C6C5C2C324.9°29.8°
C6C5C2H21100.4°149.8°
C6C5C2H22150.1°90.1°
C5C6C1C41.8°0.4°
C5C6C1O5177.9°179.9°
C5C6C1C7179.7°179.8°
C5C6C7O7165.6°6.6°
C5C6C7C814.8°173.4°
C3C2H21H22117.9°120.0°
C2C3C4H31125.2°119.9°
C2C3C4H32125.3°119.9°
C2C3H31H32117.9°120.1°
C2C3C4C154.4°58.6°
C2C3C4H4170.9°178.8°
C2C3C4H42179.6°61.2°
H21C2C3C472.0°178.8°
H21C2C3H3153.3°58.8°
H21C2C3H32162.8°61.3°
H22C2C3C4178.6°61.2°
H22C2C3H3156.2°178.9°
H22C2C3H3253.3°58.7°
C4C3H31H32117.9°120.1°
C3C4C1H41125.2°120.2°
C3C4C1H42125.3°119.9°
C3C4H41H42118.1°120.0°
C3C4C1O5152.7°150.3°
C3C4C1C627.6°29.3°
H31C3C4C1179.6°61.4°
H31C3C4H4154.3°58.9°
H31C3C4H4255.1°178.8°
H32C3C4C170.9°178.5°
H32C3C4H41163.8°61.3°
H32C3C4H4254.3°58.7°
C1C4H41H42118.1°119.9°
C4C1O5C6179.7°179.5°
C4C1C6C7178.5°179.8°
H41C4C1O582.1°30.1°
H41C4C1C697.6°149.4°
H42C4C1O527.4°89.9°
H42C4C1C6152.9°90.6°
O5C1C6C71.8°0.3°
C1C6C7O714.0°173.2°
C1C6C7C8165.5°6.8°
C6C7O7C8179.5°180.0°
C6C7O7HO7180.0°145.0°
C6C7C8C1373.8°114.6°
C6C7C8C9112.6°65.5°
O7C7C8C13105.7°65.3°
O7C7C8C967.8°114.5°
C8C7O7HO70.4°35.0°
C7C8C13C9173.6°179.8°
C7C8C13C12173.2°180.0°
C7C8C13H136.8°0.0°
C7C8C9C10173.1°179.7°
C7C8C9N9.1°0.2°
C8C13C12H13180.0°180.0°
C8C13C12C110.3°0.1°
C8C13C12H12179.7°180.0°
C13C8C9C100.4°0.5°
C13C8C9N177.4°180.0°
C9C8C13C120.4°0.2°
C9C8C13H13179.6°179.8°
C8C9C10C110.3°0.6°
C8C9C10N177.8°179.4°
C8C9C10H10179.7°179.7°
C8C9NON21.5°173.3°
C8C9NON1179.5°6.7°
C13C12C11H12180.0°179.9°
C13C12C11C14178.1°180.0°
C13C12C11C100.9°0.0°
H13C13C12C11179.7°180.0°
H13C13C12H120.3°0.0°
C12C11C14C10179.0°180.0°
C12C11C14F282.6°0.0°
C12C11C14F3157.7°120.0°
C12C11C14F138.3°120.0°
C12C11C10C90.9°0.3°
C12C11C10H10179.1°180.0°
H12C12C11C141.9°0.0°
H12C12C11C10179.0°180.0°
C11C14F2F3120.9°120.0°
C11C14F2F1120.9°120.0°
C11C14F3F1120.7°120.0°
C14C11C10C9178.1°179.7°
C14C11C10H101.9°0.0°
C10C11C14F296.5°180.0°
C10C11C14F323.2°60.1°
C10C11C14F1142.7°60.0°
C11C10C9H10180.0°179.7°
C11C10C9N178.1°180.0°
F2C14F3F1119.4°120.0°
C10C9NON2176.3°6.1°
C10C9NON12.6°173.9°
H10C10C9N1.9°0.3°
C9NON2ON1178.9°180.0°

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PDB entries from 2024-09-11

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