Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

NPB

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
BOB1sing1.42Å1.50Å
BOB2sing1.42Å1.42Å
BCP1sing1.57Å1.57Å
OB1HO11sing0.97Å0.95Å
OB2HO21sing0.97Å0.95Å
CP1CP2doub1.39Å1.36ÅAromatic
CP1CP6sing1.39Å1.36ÅAromatic
CP2CP3sing1.38Å1.36ÅAromatic
CP2HC21sing1.08Å1.10Å
CP3NTsing1.48Å1.51Å
CP3CP4doub1.38Å1.41ÅAromatic
NTO1doub1.22Å1.18Å
NTO2sing1.22Å1.20Å
CP4CP5sing1.38Å1.39ÅAromatic
CP4HC41sing1.08Å1.10Å
CP5CP6doub1.38Å1.40ÅAromatic
CP5HC51sing1.08Å1.10Å
CP6HC61sing1.08Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OB1BOB2117.8°120.0°
OB1BCP1102.3°120.0°
BOB1HO11117.8°106.8°
OB2BCP1103.2°120.1°
BOB2HO21117.8°106.9°
BCP1CP2119.5°120.1°
BCP1CP6121.0°120.1°
CP2CP1CP6119.5°119.8°
CP1CP2CP3122.2°119.9°
CP1CP2HC21119.0°120.1°
CP1CP6CP5120.8°119.8°
CP1CP6HC61118.1°120.1°
CP3CP2HC21118.8°120.0°
CP2CP3NT120.6°119.9°
CP2CP3CP4119.0°120.1°
NTCP3CP4120.4°120.0°
CP3NTO1120.7°120.0°
CP3NTO2120.7°120.1°
CP3CP4CP5119.4°120.2°
CP3CP4HC41121.1°119.8°
O1NTO2118.3°119.9°
CP5CP4HC41119.5°119.9°
CP4CP5CP6119.1°120.2°
CP4CP5HC51120.0°119.9°
CP6CP5HC51120.9°119.9°
CP5CP6HC61121.1°120.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OB1BOB2CP1111.7°179.9°
OB1BOB2HO21180.0°0.1°
OB1BCP1CP234.5°179.7°
OB1BCP1CP6143.7°0.1°
OB2BOB1HO11180.0°0.0°
OB2BCP1CP2157.3°0.2°
OB2BCP1CP620.9°180.0°
CP1BOB1HO1167.8°180.0°
CP1BOB2HO2168.3°180.0°
BCP1CP2CP6178.3°179.8°
BCP1CP2CP3177.8°179.7°
BCP1CP2HC212.1°0.2°
BCP1CP6CP5178.0°180.0°
BCP1CP6HC612.0°0.1°
CP1CP2CP3HC21180.0°179.4°
CP1CP2CP3NT177.7°179.7°
CP1CP2CP3CP40.4°0.6°
CP2CP1CP6CP50.2°0.2°
CP2CP1CP6HC61179.7°179.7°
CP6CP1CP2CP30.4°0.5°
CP6CP1CP2HC21179.6°180.0°
CP1CP6CP5CP40.0°0.1°
CP1CP6CP5HC61180.0°179.9°
CP1CP6CP5HC51180.0°180.0°
CP2CP3NTCP4178.1°179.8°
CP2CP3NTO1169.9°179.7°
CP2CP3NTO23.1°0.2°
CP2CP3CP4CP50.1°0.3°
CP2CP3CP4HC41179.9°179.7°
HC21CP2CP3NT2.3°0.2°
HC21CP2CP3CP4179.6°180.0°
CP3NTO1O2173.2°180.0°
NTCP3CP4CP5178.0°180.0°
NTCP3CP4HC412.0°0.1°
CP4CP3NTO18.1°0.0°
CP4CP3NTO2178.8°180.0°
CP3CP4CP5HC41180.0°179.9°
CP3CP4CP5CP60.1°0.0°
CP3CP4CP5HC51179.9°180.0°
CP4CP5CP6HC51180.0°180.0°
CP4CP5CP6HC61180.0°180.0°
HC41CP4CP5CP6179.9°180.0°
HC41CP4CP5HC510.1°0.1°
HC51CP5CP6HC610.0°0.0°

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon