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SummaryGeometryRelated PDB entries

NNL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAACAPsing1.51Å1.59Å
CLCAOsing1.74Å1.75Å
CACCAEdoub1.38Å1.41ÅAromatic
CACCAOsing1.38Å1.41ÅAromatic
CADCAFsing1.38Å1.41ÅAromatic
CADCAOdoub1.38Å1.41ÅAromatic
CAECAQsing1.38Å1.42ÅAromatic
CAFCAQdoub1.38Å1.42ÅAromatic
CAGNAKdoub1.31Å1.33ÅAromatic
CAGNATsing1.35Å1.33ÅAromatic
CAHCAPsing1.40Å1.42ÅAromatic
CAHCARdoub1.38Å1.43ÅAromatic
CAICAJsing1.53Å1.54Å
CAINANsing1.46Å1.48Å
CAJCAQsing1.51Å1.55Å
NAKNALsing1.29Å1.22ÅAromatic
NALCASdoub1.32Å1.32ÅAromatic
NAMCAPdoub1.31Å1.39ÅAromatic
NAMNATsing1.40Å1.25ÅAromatic
NANCARsing1.39Å1.33Å
CARCASsing1.41Å1.40ÅAromatic
CASNATsing1.37Å1.40ÅAromatic
CAAHAAsing1.09Å1.10Å
CAAHAAAsing1.09Å1.10Å
CAAHAABsing1.09Å1.10Å
CACHACsing1.08Å1.08Å
CADHADsing1.08Å1.08Å
CAEHAEsing1.08Å1.08Å
CAFHAFsing1.08Å1.08Å
CAGHAGsing1.08Å1.08Å
CAHHAHsing1.08Å1.08Å
CAIHAIsing1.09Å1.10Å
CAIHAIAsing1.09Å1.10Å
CAJHAJsing1.09Å1.10Å
CAJHAJAsing1.09Å1.10Å
NANHNANsing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAACAPCAH121.8°119.4°
CAACAPNAM119.5°119.4°
CAPCAAHAA109.5°109.5°
CAPCAAHAAA109.5°109.5°
CAPCAAHAAB109.4°109.4°
CLCAOCAC120.3°120.0°
CLCAOCAD119.4°120.0°
CAECACCAO119.7°120.0°
CACCAECAQ120.6°120.0°
CAECACHAC120.1°120.0°
CACCAEHAE119.7°120.0°
CACCAOCAD120.3°120.0°
CAOCACHAC120.1°120.0°
CAFCADCAO119.8°120.0°
CADCAFCAQ120.2°120.0°
CAFCADHAD120.1°120.0°
CADCAFHAF119.9°120.0°
CAOCADHAD120.1°120.0°
CAECAQCAF119.4°120.0°
CAECAQCAJ120.5°120.0°
CAQCAEHAE119.7°120.0°
CAFCAQCAJ120.1°120.0°
CAQCAFHAF119.9°120.0°
NAKCAGNAT108.3°107.7°
CAGNAKNAL111.1°110.2°
NAKCAGHAG125.8°126.2°
CAGNATNAM135.2°133.9°
CAGNATCAS103.3°106.0°
NATCAGHAG125.9°126.1°
CAPCAHCAR117.1°119.9°
CAHCAPNAM118.7°121.1°
CAPCAHHAH121.5°120.0°
CAHCARNAN126.4°120.6°
CAHCARCAS119.2°118.8°
CARCAHHAH121.4°120.0°
CAJCAINAN107.7°109.5°
CAICAJCAQ109.0°109.5°
CAJCAIHAI109.9°109.4°
CAJCAIHAIA109.9°109.4°
CAICAJHAJ109.6°109.5°
CAICAJHAJA109.6°109.5°
CAINANCAR124.6°120.0°
NANCAIHAI109.9°109.5°
NANCAIHAIA109.9°109.5°
CAINANHNAN105.6°120.0°
CAQCAJHAJ109.6°109.4°
CAQCAJHAJA109.6°109.5°
NAKNALCAS109.3°109.2°
NALCASCAR132.7°133.9°
NALCASNAT107.9°106.9°
CAPNAMNAT124.1°120.9°
NAMNATCAS121.5°120.1°
NANCARCAS114.4°120.6°
CARNANHNAN105.5°120.0°
CARCASNAT119.4°119.2°
HAACAAHAAA109.5°109.4°
HAACAAHAAB109.5°109.5°
HAAACAAHAAB109.5°109.5°
HAICAIHAIA109.5°109.5°
HAJCAJHAJA109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAACAPCAHNAM179.7°180.0°
CAACAPCAHCAR179.7°180.0°
CAACAPNAMNAT179.5°180.0°
CAPCAAHAAHAAA120.0°120.0°
CAPCAAHAAHAAB120.0°120.0°
CAPCAAHAAAHAAB119.9°120.0°
CAACAPCAHHAH0.3°0.0°
CLCAOCACCAE179.1°180.0°
CLCAOCACCAD179.1°180.0°
CLCAOCADCAF178.3°180.0°
CLCAOCACHAC1.0°0.3°
CLCAOCADHAD1.7°0.1°
CAECACCAOHAC180.0°179.7°
CAECACCAOCAD0.0°0.0°
CACCAECAQHAE180.0°180.0°
CACCAECAQCAF0.3°0.0°
CACCAECAQCAJ179.7°180.0°
CACCAOCADCAF0.8°0.0°
CAOCACCAECAQ0.2°0.0°
CACCAOCADHAD179.2°180.0°
CAOCACCAEHAE179.8°180.0°
CAFCADCAOHAD180.0°179.9°
CADCAFCAQCAE1.1°0.0°
CADCAFCAQHAF180.0°180.0°
CADCAFCAQCAJ179.6°180.0°
CAOCADCAFCAQ1.3°0.1°
CADCAOCACHAC180.0°179.7°
CAOCADCAFHAF178.7°180.0°
CAECAQCAFCAJ179.4°180.0°
CAECAQCAJCAI59.6°90.0°
CAQCAECACHAC179.8°179.7°
CAECAQCAFHAF178.9°180.0°
CAECAQCAJHAJ60.3°30.0°
CAECAQCAJHAJA179.6°149.9°
CAFCAQCAJCAI119.7°90.0°
CAQCAFCADHAD178.7°180.0°
CAFCAQCAEHAE179.7°180.0°
CAFCAQCAJHAJ120.4°149.9°
CAFCAQCAJHAJA0.2°30.0°
NAKCAGNATHAG180.0°179.7°
CAGNAKNALCAS0.2°0.1°
NAKCAGNATNAM179.9°180.0°
NAKCAGNATCAS0.2°0.0°
NATCAGNAKNAL0.0°0.0°
CAGNATCASNAL0.3°0.0°
CAGNATNAMCAP179.9°180.0°
CAGNATNAMCAS179.7°180.0°
CAGNATCASCAR179.5°180.0°
CAPCAHCARHAH180.0°180.0°
CAHCAPNAMNAT0.2°0.0°
CAPCAHCARNAN179.1°179.9°
CAPCAHCARCAS0.5°0.0°
CAHCAPCAAHAA179.7°90.0°
CAHCAPCAAHAAA60.3°150.1°
CAHCAPCAAHAAB59.7°30.1°
CAHCARNANCAI2.8°0.0°
CAHCARCASNAL179.8°180.0°
CARCAHCAPNAM0.0°0.0°
CAHCARNANCAS179.6°179.9°
CAHCARCASNAT0.9°0.0°
CAHCARNANHNAN124.9°180.0°
CAJCAINANHAI119.7°120.0°
CAJCAINANHAIA119.7°120.0°
CAICAJCAQHAJ119.9°120.0°
CAICAJCAQHAJA120.0°120.1°
CAJCAINANCAR158.1°180.0°
CAJCAIHAIHAIA120.8°120.0°
CAICAJHAJHAJA120.2°120.1°
CAJCAINANHNAN36.1°0.0°
NANCAICAJCAQ171.5°180.0°
CAINANCARHNAN122.1°180.0°
CAINANCARCAS177.6°180.0°
NANCAIHAIHAIA120.8°120.0°
NANCAICAJHAJ68.6°60.0°
NANCAICAJHAJA51.6°60.0°
CAJCAQCAEHAE0.3°0.0°
CAJCAQCAFHAF0.4°0.0°
CAQCAJCAIHAI68.8°60.0°
CAQCAJCAIHAIA51.8°60.0°
CAQCAJHAJHAJA120.2°119.9°
NAKNALCASCAR179.3°179.9°
NAKNALCASNAT0.3°0.1°
NALNAKCAGHAG180.0°179.8°
NALCASNATNAM179.9°180.0°
NALCASCARNAN0.2°0.1°
NALCASCARNAT178.9°180.0°
CAPNAMNATCAS0.2°0.0°
NAMCAPCAAHAA0.0°90.0°
NAMCAPCAAHAAA120.0°30.0°
NAMCAPCAAHAAB120.0°150.0°
NAMCAPCAHHAH180.0°180.0°
NAMNATCASCAR0.8°0.0°
NAMNATCAGHAG0.1°0.3°
NANCARCASNAT178.7°180.0°
NANCARCAHHAH0.9°0.0°
CARNANCAIHAI82.2°60.1°
CARNANCAIHAIA38.4°60.0°
CASCARCAHHAH179.5°180.0°
CASCARNANHNAN55.5°0.1°
CASNATCAGHAG179.8°179.7°
HAACAAHAAAHAAB120.0°120.1°
HACCACCAEHAE0.2°0.3°
HADCADCAFHAF1.3°0.0°
HAICAICAJHAJ51.1°60.0°
HAICAICAJHAJA171.3°180.0°
HAICAINANHNAN155.8°120.0°
HAIACAICAJHAJ171.7°180.0°
HAIACAICAJHAJA68.2°60.0°
HAIACAINANHNAN83.7°120.0°

246704

PDB entries from 2025-12-24

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