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Summary Geometry Related PDB entries

NMU

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	O2	doub	1.22Å	1.24Å
C1	N3	sing	1.35Å	1.32Å
C1	N4	sing	1.35Å	1.34Å
N3	HN31	sing	0.97Å	1.00Å
N3	HN32	sing	0.97Å	1.00Å
N4	C5	sing	1.46Å	1.48Å
N4	HN4	sing	0.97Å	1.00Å
C5	H51	sing	1.09Å	1.10Å
C5	H52	sing	1.09Å	1.10Å
C5	H53	sing	1.09Å	1.10Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
O2	C1	N3	117.9°	120.0°
O2	C1	N4	123.7°	120.0°
N3	C1	N4	118.3°	120.1°
C1	N3	HN31	124.2°	120.0°
C1	N3	HN32	111.6°	120.0°
C1	N4	C5	123.3°	120.1°
C1	N4	HN4	118.3°	119.9°
HN31	N3	HN32	124.2°	120.0°
C5	N4	HN4	118.3°	120.0°
N4	C5	H51	109.5°	109.5°
N4	C5	H52	109.5°	109.5°
N4	C5	H53	109.5°	109.5°
H51	C5	H52	109.5°	109.5°
H51	C5	H53	109.5°	109.5°
H52	C5	H53	109.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
O2	C1	N3	N4	180.0°	180.0°
O2	C1	N3	HN31	180.0°	180.0°
O2	C1	N3	HN32	0.0°	0.0°
O2	C1	N4	C5	0.1°	0.0°
O2	C1	N4	HN4	179.9°	180.0°
C1	N3	HN31	HN32	180.0°	180.0°
N3	C1	N4	C5	179.9°	180.0°
N3	C1	N4	HN4	0.0°	0.0°
N4	C1	N3	HN31	0.1°	0.0°
N4	C1	N3	HN32	180.0°	180.0°
C1	N4	C5	HN4	180.0°	180.0°
C1	N4	C5	H51	84.4°	180.0°
C1	N4	C5	H52	35.6°	60.0°
C1	N4	C5	H53	155.6°	60.0°
N4	C5	H51	H52	120.0°	120.0°
N4	C5	H51	H53	120.0°	120.0°
N4	C5	H52	H53	120.0°	120.0°
HN4	N4	C5	H51	95.6°	0.0°
HN4	N4	C5	H52	144.4°	120.0°
HN4	N4	C5	H53	24.4°	120.0°
H51	C5	H52	H53	120.0°	120.0°

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