NMG
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
CG | CD | sing | 1.51Å | 1.56Å | |
CG | O1 | sing | 1.34Å | 1.22Å | |
CG | O2 | doub | 1.21Å | 1.37Å | |
CD | NE | sing | 1.46Å | 1.43Å | |
CD | HD1 | sing | 1.09Å | 1.12Å | |
CD | HD2 | sing | 1.09Å | 1.12Å | |
NE | CZ | sing | 1.37Å | 1.33Å | |
NE | HNE | sing | 0.97Å | 1.02Å | |
CZ | NH1 | sing | 1.37Å | 1.31Å | |
CZ | NH2 | doub | 1.30Å | 1.35Å | |
NH1 | HH11 | sing | 0.97Å | 1.02Å | |
NH1 | HH12 | sing | 0.97Å | 1.02Å | |
NH2 | HH2 | sing | 0.97Å | 1.02Å | |
O1 | HO1 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CD | CG | O1 | 117.1° | 120.1° |
CD | CG | O2 | 111.7° | 119.9° |
CG | CD | NE | 111.9° | 109.5° |
CG | CD | HD1 | 111.3° | 109.4° |
CG | CD | HD2 | 111.3° | 109.4° |
O1 | CG | O2 | 131.3° | 120.0° |
CG | O1 | HO1 | 117.0° | 120.0° |
NE | CD | HD1 | 111.3° | 109.5° |
NE | CD | HD2 | 111.3° | 109.5° |
CD | NE | CZ | 125.0° | 120.1° |
CD | NE | HNE | 106.7° | 120.0° |
HD1 | CD | HD2 | 99.0° | 109.4° |
CZ | NE | HNE | 106.7° | 120.0° |
NE | CZ | NH1 | 119.0° | 120.1° |
NE | CZ | NH2 | 120.2° | 119.9° |
NH1 | CZ | NH2 | 120.8° | 120.0° |
CZ | NH1 | HH11 | 108.8° | 120.0° |
CZ | NH1 | HH12 | 119.0° | 120.0° |
CZ | NH2 | HH2 | 118.7° | 120.0° |
HH11 | NH1 | HH12 | 108.8° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CD | CG | O1 | O2 | 179.4° | 180.0° |
CG | CD | NE | HD1 | 125.3° | 120.0° |
CG | CD | NE | HD2 | 125.3° | 120.0° |
CG | CD | HD1 | HD2 | 117.2° | 119.9° |
CG | CD | NE | CZ | 65.6° | 180.0° |
CG | CD | NE | HNE | 169.1° | 0.0° |
CD | CG | O1 | HO1 | 180.0° | 180.0° |
O1 | CG | CD | NE | 155.8° | 180.0° |
O1 | CG | CD | HD1 | 30.5° | 60.0° |
O1 | CG | CD | HD2 | 78.9° | 59.9° |
O2 | CG | CD | NE | 23.7° | 0.0° |
O2 | CG | CD | HD1 | 149.0° | 120.0° |
O2 | CG | CD | HD2 | 101.6° | 120.1° |
O2 | CG | O1 | HO1 | 0.6° | 0.0° |
NE | CD | HD1 | HD2 | 117.2° | 120.0° |
CD | NE | CZ | HNE | 125.2° | 180.0° |
CD | NE | CZ | NH1 | 178.5° | 180.0° |
CD | NE | CZ | NH2 | 0.6° | 0.0° |
HD1 | CD | NE | CZ | 59.6° | 60.0° |
HD1 | CD | NE | HNE | 65.6° | 120.0° |
HD2 | CD | NE | CZ | 169.1° | 60.0° |
HD2 | CD | NE | HNE | 43.9° | 120.0° |
NE | CZ | NH1 | NH2 | 179.1° | 180.0° |
NE | CZ | NH1 | HH11 | 54.7° | 180.0° |
NE | CZ | NH1 | HH12 | 180.0° | 0.2° |
NE | CZ | NH2 | HH2 | 10.2° | 0.0° |
HNE | NE | CZ | NH1 | 56.2° | 0.0° |
HNE | NE | CZ | NH2 | 124.6° | 180.0° |
CZ | NH1 | HH11 | HH12 | 131.0° | 179.8° |
NH1 | CZ | NH2 | HH2 | 168.9° | 180.0° |
NH2 | CZ | NH1 | HH11 | 126.1° | 0.0° |
NH2 | CZ | NH1 | HH12 | 0.9° | 179.8° |