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NIR

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C6sing1.35Å1.36Å
N1H1N1sing0.97Å1.02Å
N1H1N2sing0.97Å1.02Å
C4C5sing1.53Å1.38Å
C4N9sing1.47Å1.37Å
C4H4sing1.09Å1.11Å
C4H41sing1.09Å1.11Å
C5C6sing1.51Å1.55Å
C5C4Nsing1.51Å1.41Å
C5H55sing1.09Å1.11Å
C6O6doub1.21Å1.21Å
C8N9sing1.47Å1.39Å
C8C5Nsing1.50Å1.34Å
C8H8sing1.09Å1.11Å
C8H81sing1.09Å1.12Å
N9C1'sing1.47Å1.42Å
C1'C2'sing1.55Å1.45Å
C1'O4'sing1.44Å1.38Å
C1'H1'sing1.09Å1.12Å
C2'O2'sing1.43Å1.43Å
C2'C3'sing1.55Å1.54Å
C2'H2'sing1.09Å1.12Å
O2'HBsing0.97Å0.95Å
C3'O3'sing1.43Å1.43Å
C3'C4'sing1.54Å1.53Å
C3'H3'sing1.09Å1.11Å
C4NC5Ndoub1.30Å1.41Å
C4NH4Nsing1.08Å1.10Å
O3'HAsing0.97Å0.95Å
C4'O4'sing1.43Å1.44Å
C4'C5'sing1.53Å1.49Å
C4'H4'sing1.09Å1.11Å
C5NH5Nsing1.08Å1.10Å
C5'H5'1sing1.09Å1.11Å
C5'H5'2sing1.09Å1.12Å
C5'H5'3sing1.09Å1.12Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6N1H1N1114.8°120.0°
C6N1H1N2122.3°120.0°
N1C6C5114.8°120.0°
N1C6O6122.3°120.0°
H1N1N1H1N2122.8°120.0°
C5C4N9121.3°108.7°
C5C4H4108.0°109.6°
C5C4H41108.0°109.7°
C4C5C6121.8°109.6°
C4C5C4N120.7°109.4°
C4C5H5530.1°109.5°
N9C4H4108.0°109.5°
N9C4H41107.9°109.6°
C4N9C8121.1°106.6°
C4N9C1'111.4°106.7°
H4C4H41101.9°109.7°
C6C5C4N117.4°109.5°
C6C5H55105.7°109.5°
C5C6O6122.8°120.0°
C4NC5H55129.8°109.4°
C5C4NC5N112.9°121.9°
C5C4NH4N123.5°119.1°
N9C8C5N114.9°110.6°
N9C8H8110.2°109.3°
N9C8H81110.2°109.2°
C8N9C1'127.5°106.7°
C5NC8H8110.3°109.2°
C5NC8H81110.3°109.3°
C8C5NC4N129.0°123.0°
C8C5NH5N115.5°118.5°
H8C8H81100.0°109.2°
N9C1'C2'138.7°110.4°
N9C1'O4'110.8°110.3°
N9C1'H1'91.2°110.2°
C2'C1'O4'110.3°105.1°
C2'C1'H1'91.2°110.3°
C1'C2'O2'115.4°111.2°
C1'C2'C3'104.6°101.0°
C1'C2'H2'107.0°111.1°
O4'C1'H1'91.2°110.3°
C1'O4'C4'109.1°110.0°
O2'C2'C3'115.2°111.1°
O2'C2'H2'107.1°111.0°
C2'O2'HB115.2°106.8°
C3'C2'H2'107.1°111.2°
C2'C3'O3'110.1°110.8°
C2'C3'C4'104.0°102.2°
C2'C3'H3'112.4°110.8°
O3'C3'C4'105.0°111.2°
O3'C3'H3'112.4°110.8°
C3'O3'HA105.0°106.8°
C4'C3'H3'112.4°110.8°
C3'C4'O4'103.1°107.6°
C3'C4'C5'122.3°109.8°
C3'C4'H4'107.1°109.8°
C5NC4NH4N123.5°119.0°
C4NC5NH5N115.5°118.5°
O4'C4'C5'109.3°109.9°
O4'C4'H4'107.1°109.8°
C5'C4'H4'107.1°109.8°
C4'C5'H5'1109.3°109.5°
C4'C5'H5'2112.3°109.5°
C4'C5'H5'3112.3°109.5°
H5'1C5'H5'2112.2°109.5°
H5'1C5'H5'3112.3°109.4°
H5'2C5'H5'398.2°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6N1H1N1H1N2177.8°180.0°
N1C6C5C439.4°179.9°
N1C6C5O6177.8°180.0°
N1C6C5C4N139.3°59.9°
N1C6C5H5567.3°60.0°
H1N1N1C6C5180.0°0.0°
H1N1N1C6O62.2°180.0°
H1N2N1C6C52.2°180.0°
H1N2N1C6O6180.0°0.0°
C5C4N9H4125.2°119.7°
C5C4N9H41125.3°119.9°
C5C4H4H41113.6°120.4°
C4C5C6C4N178.7°120.0°
C4C5C6H5527.9°120.1°
C4C5C4NH5535.4°119.9°
C4C5C6O6138.4°0.1°
C5C4N9C82.2°72.1°
C5C4N9C1'177.4°174.2°
C4C5C4NC5N0.1°15.1°
C4C5C4NH4N179.8°164.8°
N9C4H4H41113.6°120.4°
N9C4C5C6179.2°170.6°
N9C4C5C4N2.1°50.5°
N9C4C5H55115.1°69.4°
C4N9C8C1'179.6°113.8°
C4N9C8C5N0.1°54.9°
C4N9C8H8125.4°175.1°
C4N9C8H81125.2°65.4°
C4N9C1'C2'161.5°179.4°
C4N9C1'O4'13.5°63.6°
C4N9C1'H1'105.3°58.5°
H4C4C5C655.6°50.9°
H4C4C5C4N123.1°69.2°
H4C4C5H55119.6°170.9°
H4C4N9C8123.0°47.6°
H4C4N9C1'57.4°66.1°
H41C4C5C653.9°69.6°
H41C4C5C4N127.4°170.4°
H41C4C5H5510.1°50.5°
H41C4N9C8127.5°168.0°
H41C4N9C1'52.1°54.3°
C6C5C4NH55145.9°120.0°
C6C5C4NC5N178.6°135.2°
C6C5C4NH4N1.4°44.8°
C4NC5C6O642.9°120.0°
C5C4NC5NC82.8°0.1°
C5C4NC5NH4N180.0°179.9°
C5C4NC5NH5N177.2°179.9°
H55C5C6O6110.5°120.0°
H55C5C4NC5N35.6°104.8°
H55C5C4NH4N144.4°75.2°
N9C8C5NH8125.3°120.3°
N9C8C5NH81125.2°120.2°
N9C8H8H81116.0°119.4°
C8N9C1'C2'18.1°66.9°
C8N9C1'O4'166.9°177.3°
C8N9C1'H1'75.1°55.2°
N9C8C5NC4N2.7°20.3°
N9C8C5NH5N177.3°159.8°
C5NC8H8H81116.1°119.5°
C5NC8N9C1'179.6°168.6°
C8C5NC4NH5N180.0°179.9°
C8C5NC4NH4N177.2°179.8°
H8C8N9C1'55.1°71.1°
H8C8C5NC4N128.0°140.6°
H8C8C5NH5N52.0°39.5°
H81C8N9C1'54.4°48.4°
H81C8C5NC4N122.5°100.0°
H81C8C5NH5N57.5°79.9°
N9C1'C2'O4'175.0°118.9°
N9C1'C2'H1'93.2°122.1°
N9C1'O4'H1'91.8°122.0°
N9C1'C2'O2'53.0°37.4°
N9C1'C2'C3'179.4°155.3°
N9C1'C2'H2'66.0°86.7°
N9C1'O4'C4'160.0°143.5°
C2'C1'O4'H1'91.7°118.9°
C1'C2'O2'C3'122.1°111.6°
C1'C2'O2'H2'119.0°124.2°
C1'C2'C3'H2'113.3°117.9°
C1'C2'O2'HB57.9°180.0°
C1'C2'C3'O3'99.2°152.6°
C1'C2'C3'C4'12.8°34.0°
C1'C2'C3'H3'134.7°84.0°
C2'C1'O4'C4'23.6°24.5°
O4'C1'C2'O2'122.0°81.5°
O4'C1'C2'C3'5.6°36.4°
O4'C1'C2'H2'119.0°154.4°
C1'O4'C4'C3'30.7°1.8°
C1'O4'C4'C5'100.9°117.8°
C1'O4'C4'H4'143.4°121.3°
H1'C1'C2'O2'146.2°159.5°
H1'C1'C2'C3'86.2°82.5°
H1'C1'C2'H2'27.2°35.4°
H1'C1'O4'C4'68.2°94.5°
O2'C2'C3'H2'118.9°124.1°
O2'C2'C3'O3'28.5°34.6°
O2'C2'C3'C4'140.6°83.9°
O2'C2'C3'H3'97.6°158.0°
C3'C2'O2'HB180.0°68.4°
C2'C3'O3'C4'111.4°112.9°
C2'C3'O3'H3'126.1°123.4°
C2'C3'C4'H3'121.8°118.1°
C2'C3'O3'HA68.6°180.0°
C2'C3'C4'O4'25.7°21.2°
C2'C3'C4'C5'97.6°140.8°
C2'C3'C4'H4'138.5°98.3°
H2'C2'O2'HB61.1°55.8°
H2'C2'C3'O3'147.5°89.5°
H2'C2'C3'C4'100.5°152.0°
H2'C2'C3'H3'21.3°33.9°
O3'C3'C4'H3'122.5°123.6°
O3'C3'C4'O4'90.0°139.5°
O3'C3'C4'C5'146.7°100.9°
O3'C3'C4'H4'22.8°20.0°
C4'C3'O3'HA180.0°67.1°
C3'C4'O4'C5'131.6°119.6°
C3'C4'O4'H4'112.8°119.5°
C3'C4'C5'H4'123.9°120.9°
C3'C4'C5'H5'159.6°179.8°
C3'C4'C5'H5'2175.1°60.1°
C3'C4'C5'H5'365.6°59.8°
H3'C3'O3'HA57.5°56.6°
H3'C3'C4'O4'147.5°96.9°
H3'C3'C4'C5'24.2°22.7°
H3'C3'C4'H4'99.7°143.6°
H4NC4NC5NH5N2.8°0.1°
O4'C4'C5'H4'115.7°120.9°
O4'C4'C5'H5'1180.0°61.6°
O4'C4'C5'H5'254.8°178.4°
O4'C4'C5'H5'354.7°58.4°
C4'C5'H5'1H5'2125.3°120.1°
C4'C5'H5'1H5'3125.3°120.0°
C4'C5'H5'2H5'3118.2°120.0°
H4'C4'C5'H5'164.3°59.3°
H4'C4'C5'H5'260.9°60.7°
H4'C4'C5'H5'3170.4°179.3°
H5'1C5'H5'2H5'3118.2°120.0°

222415

PDB entries from 2024-07-10

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