Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

NH5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C6C1doub1.38Å1.39ÅAromatic
C1C2sing1.38Å1.39ÅAromatic
C1H1sing1.08Å1.08Å
C3C2doub1.38Å1.39ÅAromatic
C2H2sing1.08Å1.08Å
C4C3sing1.39Å1.40ÅAromatic
C3CL39sing1.74Å1.74Å
CL38C4sing1.74Å1.75Å
C5C4doub1.38Å1.39ÅAromatic
C5C6sing1.38Å1.39ÅAromatic
C5H5sing1.08Å1.08Å
C7C6sing1.51Å1.51Å
C8C7sing1.53Å1.54Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8N9sing1.47Å1.47Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
N9C10sing1.47Å1.47Å
N9HN9sing1.01Å1.00Å
C11C10sing1.53Å1.54Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C12C11sing1.51Å1.52Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
N14C12sing1.35Å1.36Å
C12O13doub1.21Å1.22Å
C15N14sing1.47Å1.47Å
C32N14sing1.46Å1.50Å
C15C16sing1.53Å1.54Å
C15H15sing1.09Å1.10Å
C15H15Asing1.09Å1.10Å
C16N17sing1.47Å1.46Å
C16H16sing1.09Å1.10Å
C16H16Asing1.09Å1.10Å
N17C18sing1.47Å1.48Å
N17HN17sing1.01Å1.00Å
C18C19sing1.53Å1.54Å
C18H18sing1.09Å1.10Å
C18H18Asing1.09Å1.10Å
C19C20sing1.51Å1.51Å
C19H19sing1.09Å1.10Å
C19H19Asing1.09Å1.10Å
C20C21doub1.38Å1.41ÅAromatic
C20C25sing1.38Å1.38ÅAromatic
C21C22sing1.38Å1.41ÅAromatic
C21H21sing1.08Å1.08Å
C22C23doub1.39Å1.40ÅAromatic
C22H22sing1.08Å1.08Å
C24C23sing1.39Å1.40ÅAromatic
C23O31sing1.36Å1.35Å
C25C24doub1.39Å1.38ÅAromatic
C24N30sing1.40Å1.40Å
O26C25sing1.36Å1.35Å
O26C27sing1.43Å1.45Å
C27C28sing1.51Å1.52Å
C27H27sing1.09Å1.10Å
C27H27Asing1.09Å1.10Å
C28N30sing1.35Å1.34Å
C28O29doub1.21Å1.21Å
N30HN30sing0.97Å1.00Å
O31HO31sing0.97Å0.95Å
C33C32sing1.53Å1.55Å
C32C37sing1.53Å1.54Å
C32H32sing1.09Å1.10Å
C34C33sing1.53Å1.54Å
C33H33sing1.09Å1.10Å
C33H33Asing1.09Å1.10Å
C34C35sing1.53Å1.54Å
C34H34sing1.09Å1.10Å
C34H34Asing1.09Å1.10Å
C35C36sing1.53Å1.54Å
C35H35sing1.09Å1.10Å
C35H35Asing1.09Å1.10Å
C36C37sing1.53Å1.54Å
C36H36sing1.09Å1.10Å
C36H36Asing1.09Å1.10Å
C37H37sing1.09Å1.10Å
C37H37Asing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C6C1C2120.7°120.0°
C6C1H1119.7°120.0°
C1C6C5119.8°120.1°
C1C6C7119.9°120.0°
C2C1H1119.7°120.0°
C1C2C3119.4°120.0°
C1C2H2120.3°120.0°
C3C2H2120.3°120.0°
C2C3C4120.4°119.9°
C2C3CL39120.0°120.0°
C4C3CL39119.6°120.0°
C3C4CL38121.5°120.0°
C3C4C5119.7°120.0°
CL38C4C5118.8°120.0°
C4C5C6120.1°120.0°
C4C5H5120.0°120.0°
C6C5H5119.9°120.0°
C5C6C7120.4°120.0°
C6C7C8114.0°109.5°
C6C7H7108.0°109.5°
C6C7H7A108.0°109.4°
C8C7H7108.0°109.5°
C8C7H7A108.0°109.5°
C7C8N9113.1°109.5°
C7C8H8108.3°109.5°
C7C8H8A108.3°109.5°
H7C7H7A111.0°109.5°
N9C8H8108.3°109.4°
N9C8H8A108.3°109.5°
C8N9C10111.1°111.0°
C8N9HN9108.9°111.0°
H8C8H8A110.6°109.5°
C10N9HN9109.0°111.0°
N9C10C11108.0°109.5°
N9C10H10109.9°109.5°
N9C10H10A109.9°109.5°
C11C10H10110.0°109.4°
C11C10H10A110.0°109.4°
C10C11C12111.7°109.5°
C10C11H11108.7°109.5°
C10C11H11A108.7°109.5°
H10C10H10A109.0°109.5°
C12C11H11108.7°109.5°
C12C11H11A108.8°109.4°
C11C12N14118.9°120.0°
C11C12O13120.5°120.1°
H11C11H11A110.2°109.5°
N14C12O13120.6°119.9°
C12N14C15123.5°120.0°
C12N14C32120.3°120.0°
C15N14C32116.0°120.0°
N14C15C16114.2°109.4°
N14C15H15107.9°109.4°
N14C15H15A107.9°109.5°
N14C32C33111.1°109.5°
N14C32C37113.5°109.5°
N14C32H32106.2°109.5°
C16C15H15107.9°109.5°
C16C15H15A107.9°109.5°
C15C16N17112.7°109.4°
C15C16H16108.4°109.5°
C15C16H16A108.4°109.5°
H15C15H15A111.0°109.5°
N17C16H16108.4°109.5°
N17C16H16A108.4°109.5°
C16N17C18110.1°111.0°
C16N17HN17109.2°111.0°
H16C16H16A110.5°109.4°
C18N17HN17109.3°111.0°
N17C18C19115.8°109.5°
N17C18H18107.4°109.4°
N17C18H18A107.4°109.5°
C19C18H18107.4°109.4°
C19C18H18A107.4°109.5°
C18C19C20108.8°109.5°
C18C19H19109.7°109.4°
C18C19H19A109.7°109.5°
H18C18H18A111.5°109.5°
C20C19H19109.7°109.4°
C20C19H19A109.7°109.5°
C19C20C21121.4°120.0°
C19C20C25121.4°120.0°
H19C19H19A109.3°109.4°
C21C20C25117.2°120.0°
C20C21C22121.8°120.3°
C20C21H21119.1°119.9°
C20C25C24122.4°119.9°
C20C25O26117.8°120.6°
C22C21H21119.1°119.8°
C21C22C23118.9°120.1°
C21C22H22120.5°120.0°
C23C22H22120.6°119.9°
C22C23C24119.2°119.7°
C22C23O31125.4°120.2°
C24C23O31115.4°120.1°
C23C24C25120.3°120.0°
C23C24N30120.8°120.7°
C23O31HO31109.5°114.0°
C25C24N30118.0°119.3°
C24C25O26119.7°119.4°
C24N30C28123.6°119.1°
C24N30HN30118.2°120.6°
C25O26C27116.6°116.8°
O26C27C28112.1°109.6°
O26C27H27108.6°109.5°
O26C27H27A108.6°109.5°
C28C27H27108.6°109.4°
C28C27H27A108.6°109.4°
C27C28N30116.0°119.6°
C27C28O29122.3°120.1°
H27C27H27A110.3°109.4°
N30C28O29121.6°120.3°
C28N30HN30118.2°120.3°
C33C32C37111.5°109.5°
C33C32H32108.4°109.5°
C32C33C34111.8°109.5°
C32C33H33108.7°109.5°
C32C33H33A108.7°109.5°
C37C32H32105.7°109.4°
C32C37C36113.4°109.4°
C32C37H37108.2°109.4°
C32C37H37A108.2°109.5°
C34C33H33108.7°109.5°
C34C33H33A108.7°109.5°
C33C34C35111.5°109.4°
C33C34H34108.8°109.5°
C33C34H34A108.8°109.5°
H33C33H33A110.2°109.4°
C35C34H34108.8°109.5°
C35C34H34A108.8°109.4°
C34C35C36112.5°109.4°
C34C35H35108.5°109.5°
C34C35H35A108.5°109.5°
H34C34H34A110.1°109.5°
C36C35H35108.5°109.4°
C36C35H35A108.5°109.5°
C35C36C37111.8°109.5°
C35C36H36108.7°109.5°
C35C36H36A108.7°109.5°
H35C35H35A110.4°109.4°
C37C36H36108.7°109.5°
C37C36H36A108.7°109.4°
C36C37H37108.2°109.5°
C36C37H37A108.2°109.5°
H36C36H36A110.3°109.5°
H37C37H37A110.7°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C6C1C2H1180.0°179.8°
C6C1C2C30.3°0.3°
C6C1C2H2179.7°179.8°
C1C6C5C40.1°0.5°
C1C6C5C7178.8°179.5°
C1C6C5H5179.8°179.7°
C1C6C7C896.1°90.5°
C1C6C7H7143.9°29.5°
C1C6C7H7A23.8°149.5°
C1C2C3H2180.0°180.0°
C1C2C3C40.5°0.0°
C1C2C3CL39178.4°180.0°
C2C1C6C50.0°0.5°
C2C1C6C7178.9°180.0°
H1C1C2C3179.7°180.0°
H1C1C2H20.4°0.0°
H1C1C6C5180.0°179.7°
H1C1C6C71.1°0.2°
C2C3C4CL39177.9°180.0°
C2C3C4CL38179.7°180.0°
C2C3C4C50.3°0.0°
H2C2C3C4179.5°180.0°
H2C2C3CL391.6°0.0°
C3C4CL38C5179.4°180.0°
C3C4C5C60.0°0.3°
C3C4C5H5180.0°179.9°
CL39C3C4CL382.4°0.0°
CL39C3C4C5178.2°180.0°
CL38C4C5C6179.4°179.8°
CL38C4C5H50.6°0.0°
C4C5C6H5180.0°179.8°
C4C5C6C7178.7°180.0°
C5C6C7C885.1°90.0°
C5C6C7H735.0°150.0°
C5C6C7H7A155.0°30.0°
H5C5C6C71.3°0.2°
C6C7C8H7120.0°120.0°
C6C7C8H7A120.0°120.0°
C6C7H7H7A118.1°120.0°
C6C7C8N916.6°180.0°
C6C7C8H8103.4°60.0°
C6C7C8H8A136.6°60.0°
C8C7H7H7A118.1°120.0°
C7C8N9H8120.0°120.0°
C7C8N9H8A120.0°120.0°
C7C8H8H8A118.5°120.0°
C7C8N9C10116.6°180.0°
C7C8N9HN93.4°56.1°
H7C7C8N9136.6°60.0°
H7C7C8H816.6°179.9°
H7C7C8H8A103.4°60.0°
H7AC7C8N9103.3°60.0°
H7AC7C8H8136.7°59.9°
H7AC7C8H8A16.7°180.0°
N9C8H8H8A118.5°120.0°
C8N9C10HN9120.0°123.9°
C8N9C10C11142.8°180.0°
C8N9C10H1022.8°60.1°
C8N9C10H10A97.2°60.0°
H8C8N9C10123.4°60.0°
H8C8N9HN9116.6°176.1°
H8AC8N9C103.4°60.0°
H8AC8N9HN9123.4°63.9°
N9C10C11H10120.0°120.0°
N9C10C11H10A120.0°120.0°
N9C10H10H10A120.6°120.1°
N9C10C11C12137.1°180.0°
N9C10C11H11102.8°60.0°
N9C10C11H11A17.1°60.0°
HN9N9C10C1197.2°56.1°
HN9N9C10H10142.8°176.0°
HN9N9C10H10A22.8°63.9°
C11C10H10H10A120.6°119.9°
C10C11C12H11120.0°120.0°
C10C11C12H11A120.0°120.0°
C10C11H11H11A119.1°120.0°
C10C11C12N14174.1°174.8°
C10C11C12O137.9°5.2°
H10C10C11C1217.2°60.0°
H10C10C11H11137.2°180.0°
H10C10C11H11A102.9°60.0°
H10AC10C11C12102.9°60.0°
H10AC10C11H1117.1°60.1°
H10AC10C11H11A137.1°179.9°
C12C11H11H11A119.1°120.0°
C11C12N14O13178.1°180.0°
C11C12N14C15178.7°5.0°
C11C12N14C323.6°174.9°
H11C11C12N1465.9°65.1°
H11C11C12O13112.1°114.9°
H11AC11C12N1454.0°54.9°
H11AC11C12O13127.9°125.1°
C12N14C15C32175.2°180.0°
C12N14C15C1644.6°90.0°
C12N14C15H15164.6°150.0°
C12N14C15H15A75.4°30.0°
C12N14C32C3393.9°62.2°
C12N14C32C37139.5°57.9°
C12N14C32H3223.8°177.9°
O13C12N14C153.3°175.0°
O13C12N14C32178.3°5.1°
N14C15C16H15120.0°119.9°
N14C15C16H15A120.0°120.0°
N14C15H15H15A118.1°120.0°
N14C15C16N1786.5°180.0°
N14C15C16H16153.5°60.0°
N14C15C16H16A33.5°60.0°
C15N14C32C3381.5°117.9°
C15N14C32C3745.2°122.1°
C15N14C32H32160.8°2.1°
C32N14C15C16140.2°90.0°
C32N14C15H1520.2°30.0°
C32N14C15H15A99.8°150.0°
N14C32C33C37127.7°120.0°
N14C32C33H32116.3°120.0°
N14C32C37H32116.0°120.0°
N14C32C33C34178.8°180.0°
N14C32C33H3358.8°59.9°
N14C32C33H33A61.2°60.0°
N14C32C37C36178.0°180.0°
N14C32C37H3758.0°60.0°
N14C32C37H37A62.0°60.0°
C16C15H15H15A118.1°120.1°
C15C16N17H16120.0°120.0°
C15C16N17H16A120.0°120.0°
C15C16H16H16A118.7°120.0°
C15C16N17C18158.3°180.0°
C15C16N17HN1781.7°56.1°
H15C15C16N1733.5°60.1°
H15C15C16H1686.5°179.9°
H15C15C16H16A153.4°60.0°
H15AC15C16N17153.5°60.0°
H15AC15C16H1633.5°60.0°
H15AC15C16H16A86.6°180.0°
N17C16H16H16A118.7°120.0°
C16N17C18HN17120.0°123.9°
C16N17C18C1987.8°180.0°
C16N17C18H18152.2°60.1°
C16N17C18H18A32.2°60.0°
H16C16N17C1838.3°60.0°
H16C16N17HN17158.3°176.1°
H16AC16N17C1881.8°59.9°
H16AC16N17HN1738.3°63.9°
N17C18C19H18120.0°119.9°
N17C18C19H18A120.0°120.1°
N17C18H18H18A117.4°120.1°
N17C18C19C20126.9°180.0°
N17C18C19H19113.1°60.1°
N17C18C19H19A6.9°59.9°
HN17N17C18C1932.2°56.2°
HN17N17C18H1887.8°176.1°
HN17N17C18H18A152.2°63.9°
C19C18H18H18A117.4°120.0°
C18C19C20H19120.0°120.0°
C18C19C20H19A120.0°120.1°
C18C19H19H19A120.2°120.0°
C18C19C20C2179.6°95.0°
C18C19C20C2599.5°84.6°
H18C18C19C206.9°60.1°
H18C18C19H19126.9°180.0°
H18C18C19H19A113.1°60.0°
H18AC18C19C20113.1°60.0°
H18AC18C19H196.9°60.0°
H18AC18C19H19A126.9°180.0°
C20C19H19H19A120.3°120.0°
C19C20C21C25179.1°179.6°
C19C20C21C22179.9°179.9°
C19C20C21H210.0°0.2°
C19C20C25C24179.5°179.8°
C19C20C25O263.1°0.2°
H19C19C20C2140.4°145.0°
H19C19C20C25140.5°35.3°
H19AC19C20C21160.5°25.1°
H19AC19C20C2520.5°155.3°
C20C21C22H21180.0°179.9°
C20C21C22C231.8°0.0°
C20C21C22H22178.2°180.0°
C21C20C25C241.4°0.6°
C21C20C25O26176.0°179.8°
C25C20C21C220.9°0.3°
C25C20C21H21179.1°179.8°
C20C25C24C232.8°0.6°
C20C25C24O26177.4°179.6°
C20C25C24N30172.5°179.7°
C20C25O26C27143.0°147.1°
C21C22C23H22180.0°180.0°
C21C22C23C243.0°0.0°
C21C22C23O31177.1°180.0°
H21C21C22C23178.2°179.9°
H21C21C22H221.7°0.0°
C22C23C24O31179.9°180.0°
C22C23C24C253.5°0.3°
C22C23C24N30173.0°180.0°
C22C23O31HO31180.0°90.0°
H22C22C23C24177.0°180.0°
H22C22C23O312.9°0.0°
C23C24C25N30169.7°179.7°
C23C24C25O26174.6°179.9°
C23C24N30C28155.2°165.3°
C23C24N30HN3024.8°15.5°
C24C23O31HO310.1°90.0°
O31C23C24C25176.6°179.7°
O31C23C24N307.2°0.0°
C24C25O26C2734.5°32.5°
C25C24N30C2814.5°14.9°
C25C24N30HN30165.5°164.2°
N30C24C25O264.9°0.1°
C24N30C28C272.9°2.5°
C24N30C28HN30180.0°179.1°
C24N30C28O29176.7°178.1°
C25O26C27C2843.5°46.4°
C25O26C27H27163.5°166.5°
C25O26C27H27A76.5°73.6°
O26C27C28H27120.0°120.1°
O26C27C28H27A120.0°120.1°
O26C27H27H27A118.9°119.9°
O26C27C28N3024.9°31.9°
O26C27C28O29155.4°148.7°
C28C27H27H27A119.0°119.9°
C27C28N30O29179.7°179.4°
C27C28N30HN30177.1°178.4°
H27C27C28N30144.9°152.0°
H27C27C28O2935.4°28.6°
H27AC27C28N3095.1°88.2°
H27AC27C28O2984.6°91.2°
O29C28N30HN303.3°1.1°
C33C32C37H32117.6°120.0°
C32C33C34H33120.0°120.1°
C32C33C34H33A120.0°120.0°
C32C33H33H33A119.0°120.0°
C32C33C34C3555.1°60.0°
C32C33C34H3464.9°60.0°
C32C33C34H34A175.1°179.9°
C33C32C37C3651.6°60.0°
C33C32C37H3768.4°60.0°
C33C32C37H37A171.6°180.0°
C37C32C33C3453.5°60.0°
C37C32C33H33173.5°180.0°
C37C32C33H33A66.5°60.0°
C32C37C36C3550.8°60.0°
C32C37C36H37120.0°119.9°
C32C37C36H37A120.0°120.0°
C32C37C36H3669.2°60.1°
C32C37C36H36A170.8°180.0°
C32C37H37H37A118.4°120.0°
H32C32C33C3462.5°60.0°
H32C32C33H3357.5°60.1°
H32C32C33H33A177.5°180.0°
H32C32C37C3666.0°60.0°
H32C32C37H37174.0°180.0°
H32C32C37H37A54.0°60.0°
C34C33H33H33A119.0°120.0°
C33C34C35H34120.0°120.0°
C33C34C35H34A120.0°120.0°
C33C34H34H34A119.2°120.0°
C33C34C35C3654.5°60.0°
C33C34C35H35174.5°180.0°
C33C34C35H35A65.6°60.0°
H33C33C34C35175.1°179.9°
H33C33C34H3455.1°60.0°
H33C33C34H34A64.9°60.0°
H33AC33C34C3565.0°60.0°
H33AC33C34H34175.0°180.0°
H33AC33C34H34A55.1°60.0°
C35C34H34H34A119.2°120.0°
C34C35C36H35120.0°119.9°
C34C35C36H35A120.0°120.1°
C34C35H35H35A118.8°120.1°
C34C35C36C3751.9°60.1°
C34C35C36H3668.1°60.0°
C34C35C36H36A171.9°180.0°
H34C34C35C3665.5°60.0°
H34C34C35H3554.5°59.9°
H34C34C35H35A174.4°179.9°
H34AC34C35C36174.5°180.0°
H34AC34C35H3565.6°60.1°
H34AC34C35H35A54.4°59.9°
C36C35H35H35A118.8°120.0°
C35C36C37H36120.0°120.0°
C35C36C37H36A120.0°120.0°
C35C36H36H36A119.0°120.0°
C35C36C37H3769.2°60.0°
C35C36C37H37A170.8°180.0°
H35C35C36C37171.9°180.0°
H35C35C36H3651.9°60.0°
H35C35C36H36A68.1°60.0°
H35AC35C36C3768.1°60.0°
H35AC35C36H36171.9°179.9°
H35AC35C36H36A51.9°59.9°
C37C36H36H36A119.1°120.0°
C36C37H37H37A118.4°120.0°
H36C36C37H37170.8°NaN°
H36C36C37H37A50.8°59.9°
H36AC36C37H3750.8°60.0°
H36AC36C37H37A69.2°60.0°

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon