NGF
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C9 | O9 | sing | 1.43Å | 1.42Å | |
C9 | C8 | sing | 1.53Å | 1.53Å | |
O7 | C7 | sing | 1.43Å | 1.45Å | |
C8 | C7 | sing | 1.53Å | 1.53Å | |
C8 | O8 | sing | 1.43Å | 1.44Å | |
C7 | C6 | sing | 1.53Å | 1.52Å | |
O5 | C11 | sing | 1.43Å | 1.45Å | |
C11 | C10 | sing | 1.51Å | 1.53Å | |
O6 | C6 | sing | 1.43Å | 1.46Å | |
C6 | C5 | sing | 1.53Å | 1.53Å | |
C10 | O10 | doub | 1.21Å | 1.23Å | |
C10 | N5 | sing | 1.35Å | 1.34Å | |
C5 | N5 | sing | 1.46Å | 1.49Å | |
C5 | C4 | sing | 1.53Å | 1.53Å | |
O1 | C1 | doub | 1.21Å | 1.23Å | |
C3 | C4 | sing | 1.53Å | 1.57Å | |
C3 | C2 | sing | 1.51Å | 1.48Å | |
C4 | O4 | sing | 1.43Å | 1.45Å | |
C1 | C2 | sing | 1.49Å | 1.42Å | |
C1 | O3 | sing | 1.35Å | 1.23Å | |
C2 | O2 | doub | 1.21Å | 1.13Å | |
C11 | H1 | sing | 1.09Å | 1.10Å | |
C11 | H2 | sing | 1.09Å | 1.10Å | |
N5 | H3 | sing | 0.97Å | 1.00Å | |
C5 | H4 | sing | 1.09Å | 1.10Å | |
C4 | H5 | sing | 1.09Å | 1.10Å | |
O4 | H6 | sing | 0.97Å | 0.95Å | |
C3 | H7 | sing | 1.09Å | 1.10Å | |
C3 | H8 | sing | 1.09Å | 1.10Å | |
C6 | H9 | sing | 1.09Å | 1.10Å | |
O6 | H10 | sing | 0.97Å | 0.95Å | |
O3 | H11 | sing | 0.97Å | 0.95Å | |
C7 | H12 | sing | 1.09Å | 1.10Å | |
O7 | H13 | sing | 0.97Å | 0.95Å | |
C8 | H14 | sing | 1.09Å | 1.10Å | |
O8 | H15 | sing | 0.97Å | 0.95Å | |
C9 | H16 | sing | 1.09Å | 1.10Å | |
C9 | H17 | sing | 1.09Å | 1.10Å | |
O9 | H18 | sing | 0.97Å | 0.95Å | |
O5 | H19 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O9 | C9 | C8 | 106.3° | 109.4° |
O9 | C9 | H16 | 110.3° | 109.4° |
O9 | C9 | H17 | 110.2° | 109.4° |
C9 | O9 | H18 | 109.5° | 114.0° |
C9 | C8 | C7 | 111.8° | 109.4° |
C9 | C8 | O8 | 110.5° | 109.5° |
C9 | C8 | H14 | 107.9° | 109.5° |
C8 | C9 | H16 | 110.3° | 109.5° |
C8 | C9 | H17 | 110.3° | 109.5° |
O7 | C7 | C8 | 110.2° | 109.5° |
O7 | C7 | C6 | 106.4° | 109.4° |
O7 | C7 | H12 | 109.3° | 109.4° |
C7 | O7 | H13 | 109.5° | 113.9° |
C7 | C8 | O8 | 109.6° | 109.4° |
C8 | C7 | C6 | 114.2° | 109.5° |
C8 | C7 | H12 | 108.2° | 109.5° |
C7 | C8 | H14 | 107.9° | 109.5° |
O8 | C8 | H14 | 109.0° | 109.5° |
C8 | O8 | H15 | 109.5° | 114.0° |
C7 | C6 | O6 | 108.5° | 109.5° |
C7 | C6 | C5 | 110.2° | 109.5° |
C7 | C6 | H9 | 110.9° | 109.5° |
C6 | C7 | H12 | 108.4° | 109.5° |
O5 | C11 | C10 | 116.1° | 109.5° |
O5 | C11 | H1 | 107.8° | 109.4° |
O5 | C11 | H2 | 107.8° | 109.4° |
C11 | O5 | H19 | 109.5° | 114.0° |
C11 | C10 | O10 | 118.3° | 120.0° |
C11 | C10 | N5 | 119.8° | 120.0° |
C10 | C11 | H1 | 107.8° | 109.5° |
C10 | C11 | H2 | 107.8° | 109.5° |
O6 | C6 | C5 | 104.4° | 109.5° |
O6 | C6 | H9 | 111.8° | 109.4° |
C6 | O6 | H10 | 109.5° | 114.0° |
C6 | C5 | N5 | 118.0° | 109.4° |
C6 | C5 | C4 | 103.0° | 109.5° |
C6 | C5 | H4 | 105.6° | 109.5° |
C5 | C6 | H9 | 110.8° | 109.5° |
O10 | C10 | N5 | 121.9° | 120.0° |
C10 | N5 | C5 | 122.7° | 120.0° |
C10 | N5 | H3 | 118.6° | 120.0° |
N5 | C5 | C4 | 117.7° | 109.5° |
C5 | N5 | H3 | 118.7° | 120.0° |
N5 | C5 | H4 | 105.9° | 109.5° |
C5 | C4 | C3 | 113.0° | 109.5° |
C5 | C4 | O4 | 109.9° | 109.5° |
C4 | C5 | H4 | 105.5° | 109.5° |
C5 | C4 | H5 | 102.6° | 109.5° |
O1 | C1 | C2 | 124.3° | 120.0° |
O1 | C1 | O3 | 120.3° | 120.0° |
C4 | C3 | C2 | 107.7° | 109.5° |
C3 | C4 | O4 | 122.9° | 109.5° |
C3 | C4 | H5 | 102.3° | 109.5° |
C4 | C3 | H7 | 109.9° | 109.5° |
C4 | C3 | H8 | 109.9° | 109.5° |
C3 | C2 | C1 | 129.1° | 120.0° |
C3 | C2 | O2 | 114.2° | 120.0° |
C2 | C3 | H7 | 109.9° | 109.5° |
C2 | C3 | H8 | 109.9° | 109.4° |
O4 | C4 | H5 | 103.3° | 109.5° |
C4 | O4 | H6 | 109.5° | 114.0° |
C2 | C1 | O3 | 115.3° | 120.0° |
C1 | C2 | O2 | 116.7° | 120.0° |
C1 | O3 | H11 | 109.5° | 117.0° |
H1 | C11 | H2 | 109.5° | 109.4° |
H7 | C3 | H8 | 109.5° | 109.5° |
H16 | C9 | H17 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O9 | C9 | C8 | H16 | 119.5° | 119.9° |
O9 | C9 | C8 | H17 | 119.5° | 120.0° |
O9 | C9 | C8 | C7 | 52.2° | 175.0° |
O9 | C9 | C8 | O8 | 70.2° | 65.0° |
O9 | C9 | C8 | H14 | 170.7° | 55.0° |
O9 | C9 | H16 | H17 | 121.4° | 119.9° |
C9 | C8 | C7 | O7 | 73.0° | 60.0° |
C9 | C8 | C7 | O8 | 122.9° | 120.0° |
C9 | C8 | C7 | H14 | 118.5° | 120.0° |
C9 | C8 | O8 | H14 | 118.5° | 120.0° |
C9 | C8 | C7 | C6 | 167.3° | 180.0° |
C9 | C8 | C7 | H12 | 46.5° | 60.0° |
C9 | C8 | O8 | H15 | 180.0° | 60.0° |
C8 | C9 | H16 | H17 | 121.5° | 120.1° |
C8 | C9 | O9 | H18 | 180.0° | 180.0° |
O7 | C7 | C8 | C6 | 119.7° | 120.0° |
O7 | C7 | C8 | H12 | 119.5° | 120.0° |
O7 | C7 | C8 | O8 | 164.0° | 180.0° |
O7 | C7 | C6 | H12 | 117.5° | 119.9° |
O7 | C7 | C6 | O6 | 65.3° | 65.1° |
O7 | C7 | C6 | C5 | 48.5° | 55.0° |
O7 | C7 | C6 | H9 | 171.6° | 175.0° |
O7 | C7 | C8 | H14 | 45.5° | 60.0° |
C7 | C8 | O8 | H14 | 117.9° | 120.0° |
C8 | C7 | C6 | H12 | 120.7° | 120.1° |
C8 | C7 | C6 | O6 | 56.5° | 55.0° |
C8 | C7 | C6 | C5 | 170.2° | 175.0° |
C8 | C7 | C6 | H9 | 66.7° | 65.0° |
C8 | C7 | O7 | H13 | 180.0° | 60.0° |
C7 | C8 | O8 | H15 | 56.3° | 60.0° |
C7 | C8 | C9 | H16 | 67.3° | 55.1° |
C7 | C8 | C9 | H17 | 171.7° | 65.0° |
O8 | C8 | C7 | C6 | 44.4° | 60.0° |
O8 | C8 | C7 | H12 | 76.4° | 60.0° |
O8 | C8 | C9 | H16 | 170.3° | 175.0° |
O8 | C8 | C9 | H17 | 49.3° | 54.9° |
C7 | C6 | O6 | C5 | 117.5° | 120.0° |
C7 | C6 | O6 | H9 | 122.6° | 120.0° |
C7 | C6 | C5 | H9 | 123.1° | 120.0° |
C7 | C6 | C5 | N5 | 65.1° | 60.0° |
C7 | C6 | C5 | C4 | 163.4° | 180.0° |
C7 | C6 | C5 | H4 | 53.0° | 60.0° |
C7 | C6 | O6 | H10 | 180.0° | 60.1° |
C6 | C7 | O7 | H13 | 55.8° | 60.0° |
C6 | C7 | C8 | H14 | 74.2° | 60.0° |
O5 | C11 | C10 | H1 | 121.0° | 120.0° |
O5 | C11 | C10 | H2 | 121.0° | 120.0° |
O5 | C11 | C10 | O10 | 114.6° | 0.1° |
O5 | C11 | C10 | N5 | 69.1° | 179.8° |
O5 | C11 | H1 | H2 | 117.0° | 119.9° |
C11 | C10 | O10 | N5 | 176.3° | 179.8° |
C11 | C10 | N5 | C5 | 11.0° | 174.8° |
C10 | C11 | H1 | H2 | 117.0° | 120.1° |
C11 | C10 | N5 | H3 | 169.0° | 5.1° |
C10 | C11 | O5 | H19 | 180.0° | 179.9° |
O6 | C6 | C5 | H9 | 120.5° | 120.0° |
O6 | C6 | C5 | N5 | 178.5° | 180.0° |
O6 | C6 | C5 | C4 | 47.0° | 60.0° |
O6 | C6 | C5 | H4 | 63.4° | 60.0° |
O6 | C6 | C7 | H12 | 177.2° | 175.0° |
C6 | C5 | N5 | C10 | 98.0° | 125.2° |
C6 | C5 | N5 | C4 | 124.5° | 120.0° |
C6 | C5 | N5 | H4 | 117.9° | 120.0° |
C6 | C5 | C4 | H4 | 110.5° | 120.0° |
C6 | C5 | C4 | C3 | 129.0° | 178.8° |
C6 | C5 | C4 | O4 | 89.7° | 58.9° |
C6 | C5 | N5 | H3 | 82.0° | 54.9° |
C6 | C5 | C4 | H5 | 19.7° | 61.1° |
C5 | C6 | O6 | H10 | 62.5° | 60.0° |
C5 | C6 | C7 | H12 | 69.0° | 64.9° |
O10 | C10 | N5 | C5 | 165.2° | 5.1° |
O10 | C10 | C11 | H1 | 124.5° | 120.0° |
O10 | C10 | C11 | H2 | 6.4° | 120.0° |
O10 | C10 | N5 | H3 | 14.8° | 175.0° |
C10 | N5 | C5 | H3 | 180.0° | 179.9° |
C10 | N5 | C5 | C4 | 137.4° | 114.8° |
N5 | C10 | C11 | H1 | 51.9° | 59.8° |
N5 | C10 | C11 | H2 | 169.9° | 60.2° |
C10 | N5 | C5 | H4 | 19.9° | 5.2° |
N5 | C5 | C4 | H4 | 117.8° | 120.1° |
N5 | C5 | C4 | C3 | 99.2° | 58.9° |
N5 | C5 | C4 | O4 | 42.0° | 61.1° |
N5 | C5 | C4 | H5 | 151.4° | 178.9° |
N5 | C5 | C6 | H9 | 58.0° | 60.0° |
C5 | C4 | C3 | O4 | 135.5° | 120.0° |
C5 | C4 | C3 | H5 | 109.6° | 120.0° |
C5 | C4 | C3 | C2 | 101.4° | 175.0° |
C5 | C4 | O4 | H5 | 108.9° | 120.0° |
C4 | C5 | N5 | H3 | 42.6° | 65.1° |
C5 | C4 | O4 | H6 | 111.9° | 55.2° |
C5 | C4 | C3 | H7 | 18.3° | 65.0° |
C5 | C4 | C3 | H8 | 138.8° | 55.0° |
C4 | C5 | C6 | H9 | 73.5° | 60.0° |
O1 | C1 | C2 | C3 | 9.3° | 0.0° |
O1 | C1 | C2 | O3 | 176.9° | 179.9° |
O1 | C1 | C2 | O2 | 172.0° | 180.0° |
O1 | C1 | O3 | H11 | 0.0° | 0.1° |
C4 | C3 | C2 | H7 | 119.7° | 120.0° |
C4 | C3 | C2 | H8 | 119.7° | 120.0° |
C3 | C4 | O4 | H5 | 114.4° | 120.0° |
C4 | C3 | C2 | C1 | 162.0° | 180.0° |
C4 | C3 | C2 | O2 | 16.7° | 0.0° |
C3 | C4 | C5 | H4 | 18.6° | 61.2° |
C3 | C4 | O4 | H6 | 24.8° | 64.8° |
C4 | C3 | H7 | H8 | 120.8° | 120.0° |
C2 | C3 | C4 | O4 | 34.1° | 65.0° |
C3 | C2 | C1 | O2 | 178.7° | 180.0° |
C3 | C2 | C1 | O3 | 173.8° | 180.0° |
C2 | C3 | C4 | H5 | 149.0° | 55.0° |
C2 | C3 | H7 | H8 | 120.8° | 120.0° |
O4 | C4 | C5 | H4 | 159.8° | 178.8° |
O4 | C4 | C3 | H7 | 153.9° | 55.0° |
O4 | C4 | C3 | H8 | 85.6° | 175.0° |
C1 | C2 | C3 | H7 | 42.3° | 60.0° |
C1 | C2 | C3 | H8 | 78.2° | 60.0° |
C2 | C1 | O3 | H11 | 177.0° | 180.0° |
O3 | C1 | C2 | O2 | 4.9° | 0.0° |
O2 | C2 | C3 | H7 | 136.5° | 120.0° |
O2 | C2 | C3 | H8 | 103.0° | 120.0° |
H1 | C11 | O5 | H19 | 59.0° | 59.9° |
H2 | C11 | O5 | H19 | 59.0° | 60.0° |
H3 | N5 | C5 | H4 | 160.1° | 174.9° |
H4 | C5 | C4 | H5 | 90.8° | 58.8° |
H4 | C5 | C6 | H9 | 176.1° | 180.0° |
H5 | C4 | O4 | H6 | 139.2° | 175.2° |
H5 | C4 | C3 | H7 | 91.2° | 175.0° |
H5 | C4 | C3 | H8 | 29.3° | 65.0° |
H9 | C6 | O6 | H10 | 57.4° | 180.0° |
H9 | C6 | C7 | H12 | 54.1° | 55.1° |
H12 | C7 | O7 | H13 | 61.1° | 180.0° |
H12 | C7 | C8 | H14 | 165.0° | 180.0° |
H14 | C8 | O8 | H15 | 61.5° | 180.0° |
H14 | C8 | C9 | H16 | 51.1° | 64.9° |
H14 | C8 | C9 | H17 | 69.8° | 175.0° |
H16 | C9 | O9 | H18 | 60.5° | 60.0° |
H17 | C9 | O9 | H18 | 60.5° | 60.0° |