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NDO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
PAO1Adoub1.48Å1.58Å
PAO2Asing1.61Å1.45Å
PAO5Bsing1.61Å1.58Å
PAO3sing1.61Å1.48Å
O2AHOA2sing0.97Å0.95Å
O5BC5Bsing1.43Å1.61Å
C5BC4Bsing1.53Å1.50Å
C5BH51Asing1.09Å1.12Å
C5BH52Asing1.09Å1.12Å
C4BO4Bsing1.44Å1.48Å
C4BC3Bsing1.54Å1.43Å
C4BH4Bsing1.09Å1.11Å
O4BC1Bsing1.44Å1.45Å
C3BO3Bsing1.43Å1.44Å
C3BC2Bsing1.55Å1.49Å
C3BH3Bsing1.09Å1.12Å
O3BHO3Asing0.97Å0.95Å
C2BO2Bsing1.43Å1.56Å
C2BC1Bsing1.55Å1.51Å
C2BH2Bsing1.09Å1.11Å
O2BP2Bsing1.61Å1.60Å
C1BN9Asing1.47Å1.46Å
C1BH1Bsing1.09Å1.11Å
N9AC8Asing1.36Å1.39ÅAromatic
N9AC4Asing1.37Å1.38ÅAromatic
C8AN7Adoub1.30Å1.30ÅAromatic
C8AH8Asing1.08Å1.10Å
N7AC5Asing1.35Å1.38ÅAromatic
C5AC6Asing1.40Å1.40ÅAromatic
C5AC4Adoub1.41Å1.35ÅAromatic
C6AO6Asing1.35Å1.32Å
C6AN1Adoub1.33Å1.36ÅAromatic
O6AHO6Asing0.97Å0.95Å
N1AC2Asing1.32Å1.34ÅAromatic
C2AN3Adoub1.32Å1.33ÅAromatic
C2AH2Asing1.08Å1.10Å
N3AC4Asing1.33Å1.36ÅAromatic
O3PNsing1.61Å1.63Å
PNO1Ndoub1.54Å1.49Å
PNO2Nsing1.54Å1.49Å
PNO5Dsing1.61Å1.80Å
O5DC5Dsing1.43Å1.27Å
C5DC4Dsing1.53Å1.56Å
C5DH51Nsing1.09Å1.12Å
C5DH52Nsing1.09Å1.12Å
C4DO4Dsing1.44Å1.28Å
C4DC3Dsing1.54Å1.57Å
C4DH4Dsing1.09Å1.12Å
O4DC1Dsing1.44Å1.28Å
C3DO3Dsing1.43Å1.39Å
C3DC2Dsing1.55Å1.59Å
C3DH3Dsing1.09Å1.11Å
O3DHO3Nsing0.97Å0.95Å
C2DO2Dsing1.43Å1.58Å
C2DC1Dsing1.54Å1.57Å
C2DH2Dsing1.09Å1.11Å
O2DHO2Nsing0.97Å0.95Å
C1DN1Nsing1.46Å1.48Å
C1DH1Dsing1.09Å1.12Å
N1NC2Nsing1.32Å1.39ÅAromatic
N1NC6Ndoub1.32Å1.39ÅAromatic
C2NC3Ndoub1.40Å1.43ÅAromatic
C2NH2Nsing1.08Å1.10Å
C3NC7Nsing1.48Å1.46Å
C3NC4Nsing1.40Å1.39ÅAromatic
C7NO7Ndoub1.22Å1.24Å
C7NN7Nsing1.35Å1.33Å
N7NH71Nsing0.97Å1.02Å
N7NH72Nsing0.97Å1.02Å
C4NC5Ndoub1.38Å1.34ÅAromatic
C4NH4Nsing1.08Å1.10Å
C5NC6Nsing1.38Å1.37ÅAromatic
C5NH5Nsing1.08Å1.10Å
C6NH6Nsing1.08Å1.10Å
P2BO1Xdoub1.48Å1.48Å
P2BO2Xsing1.61Å1.47Å
P2BO3Xsing1.61Å1.47Å
O2XHOP2sing0.97Å0.95Å
O3XHOP3sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1APAO2A111.4°109.5°
O1APAO5B108.3°109.5°
O1APAO3126.1°109.4°
O2APAO5B101.9°109.5°
O2APAO3107.3°109.4°
PAO2AHOA2111.5°106.8°
O5BPAO398.5°109.5°
PAO5BC5B116.8°106.8°
PAO3PN140.3°106.8°
O5BC5BC4B102.0°109.4°
O5BC5BH51A115.1°109.4°
O5BC5BH52A115.1°109.4°
C4BC5BH51A115.1°109.5°
C4BC5BH52A115.1°109.5°
C5BC4BO4B107.7°109.9°
C5BC4BC3B110.6°109.8°
C5BC4BH4B107.5°109.9°
H51AC5BH52A95.3°109.5°
O4BC4BC3B101.0°107.4°
O4BC4BH4B116.3°109.9°
C4BO4BC1B107.9°107.0°
C3BC4BH4B113.6°109.9°
C4BC3BO3B122.6°110.7°
C4BC3BC2B109.4°104.1°
C4BC3BH3B101.0°110.5°
O4BC1BC2B107.6°103.5°
O4BC1BN9A104.9°110.7°
O4BC1BH1B118.7°110.7°
O3BC3BC2B113.5°110.5°
O3BC3BH3B95.3°110.4°
C3BO3BHO3A122.6°106.8°
C2BC3BH3B113.3°110.5°
C3BC2BO2B106.0°110.9°
C3BC2BC1B95.6°102.1°
C3BC2BH2B117.0°111.0°
O2BC2BC1B100.1°110.9°
O2BC2BH2B113.5°110.8°
C2BO2BP2B118.5°106.8°
C1BC2BH2B121.8°110.9°
C2BC1BN9A121.3°110.7°
C2BC1BH1B101.3°110.6°
O2BP2BO1X104.2°109.5°
O2BP2BO2X103.9°109.4°
O2BP2BO3X103.9°109.5°
N9AC1BH1B104.1°110.6°
C1BN9AC8A127.8°126.3°
C1BN9AC4A127.3°126.3°
C8AN9AC4A104.9°107.5°
N9AC8AN7A112.9°110.0°
N9AC8AH8A126.3°125.0°
N9AC4AC5A106.5°106.0°
N9AC4AN3A127.0°135.0°
N7AC8AH8A120.8°125.0°
C8AN7AC5A104.7°109.4°
N7AC5AC6A132.0°134.7°
N7AC5AC4A111.1°107.1°
C6AC5AC4A116.9°118.2°
C5AC6AO6A122.0°120.7°
C5AC6AN1A117.9°118.5°
C5AC4AN3A126.5°119.1°
O6AC6AN1A120.1°120.8°
C6AO6AHO6A122.0°106.9°
C6AN1AC2A120.0°121.3°
N1AC2AN3A126.0°122.5°
N1AC2AH2A117.6°118.8°
N3AC2AH2A116.4°118.7°
C2AN3AC4A112.6°120.6°
O3PNO1N106.7°109.5°
O3PNO2N117.6°109.4°
O3PNO5D108.8°109.5°
O1NPNO2N117.7°109.5°
O1NPNO5D100.5°109.5°
O2NPNO5D103.9°109.5°
PNO5DC5D131.2°106.8°
O5DC5DC4D121.9°109.5°
O5DC5DH51N107.8°109.5°
O5DC5DH52N107.8°109.5°
C4DC5DH51N107.7°109.5°
C4DC5DH52N107.8°109.5°
C5DC4DO4D128.0°110.4°
C5DC4DC3D112.1°110.5°
C5DC4DH4D90.5°110.3°
H51NC5DH52N102.1°109.4°
O4DC4DC3D94.3°104.8°
O4DC4DH4D109.4°110.4°
C4DO4DC1D139.6°105.3°
C3DC4DH4D126.1°110.4°
C4DC3DO3D107.1°110.5°
C4DC3DC2D100.4°104.1°
C4DC3DH3D116.8°110.5°
O4DC1DC2D90.8°104.9°
O4DC1DN1N138.6°110.4°
O4DC1DH1D105.5°110.4°
O3DC3DC2D110.1°110.5°
O3DC3DH3D108.1°110.4°
C3DO3DHO3N107.1°106.8°
C2DC3DH3D114.0°110.6°
C3DC2DO2D112.4°110.5°
C3DC2DC1D108.2°104.0°
C3DC2DH2D107.1°110.5°
O2DC2DC1D105.3°110.8°
O2DC2DH2D109.9°110.5°
C2DO2DHO2N112.4°106.8°
C1DC2DH2D114.0°110.4°
C2DC1DN1N110.3°110.4°
C2DC1DH1D136.4°110.4°
N1NC1DH1D83.7°110.3°
C1DN1NC2N115.4°119.0°
C1DN1NC6N124.0°119.1°
C2NN1NC6N120.6°121.9°
N1NC2NC3N117.1°120.5°
N1NC2NH2N120.3°119.8°
N1NC6NC5N121.3°121.1°
N1NC6NH6N120.2°119.4°
C3NC2NH2N122.6°119.7°
C2NC3NC7N121.0°120.6°
C2NC3NC4N119.2°118.9°
C7NC3NC4N119.9°120.6°
C3NC7NO7N122.2°120.0°
C3NC7NN7N119.3°120.0°
C3NC4NC5N122.7°118.3°
C3NC4NH4N120.7°120.8°
O7NC7NN7N118.4°120.0°
C7NN7NH71N118.4°120.1°
C7NN7NH72N119.3°120.0°
H71NN7NH72N122.3°119.9°
C5NC4NH4N116.7°120.9°
C4NC5NC6N119.1°119.3°
C4NC5NH5N119.3°120.3°
C6NC5NH5N121.6°120.4°
C5NC6NH6N118.5°119.4°
O1XP2BO2X114.2°109.4°
O1XP2BO3X114.3°109.5°
O2XP2BO3X114.5°109.5°
P2BO2XHOP2103.9°106.8°
P2BO3XHOP3103.9°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1APAO2AO5B115.3°120.0°
O1APAO2AO3141.8°119.9°
O1APAO5BO3132.6°120.0°
O1APAO2AHOA2180.0°180.0°
O1APAO5BC5B96.0°55.0°
O1APAO3PN21.8°40.0°
O2APAO5BO3109.8°120.0°
O2APAO5BC5B21.5°65.0°
O2APAO3PN156.3°80.0°
O5BPAO2AHOA264.7°60.0°
PAO5BC5BC4B164.1°180.0°
PAO5BC5BH51A38.7°60.0°
PAO5BC5BH52A70.6°60.0°
O5BPAO3PN98.4°160.0°
O3PAO2AHOA238.2°60.0°
O3PAO5BC5B131.4°175.0°
PAO3PNO1N105.1°80.0°
PAO3PNO2N29.6°40.0°
PAO3PNO5D147.3°160.0°
O5BC5BC4BH51A125.3°120.0°
O5BC5BC4BH52A125.3°120.0°
O5BC5BH51AH52A120.9°120.0°
O5BC5BC4BO4B161.9°66.7°
O5BC5BC4BC3B52.4°175.3°
O5BC5BC4BH4B72.1°54.3°
C4BC5BH51AH52A120.9°120.1°
C5BC4BO4BC3B116.0°119.4°
C5BC4BO4BH4B120.6°121.1°
C5BC4BC3BH4B121.0°121.0°
C5BC4BO4BC1B129.6°145.9°
C5BC4BC3BO3B72.4°119.9°
C5BC4BC3BC2B151.0°121.4°
C5BC4BC3BH3B31.3°2.8°
H51AC5BC4BO4B72.8°53.2°
H51AC5BC4BC3B177.7°64.7°
H51AC5BC4BH4B53.2°174.3°
H52AC5BC4BO4B36.6°173.3°
H52AC5BC4BC3B72.8°55.4°
H52AC5BC4BH4B162.6°65.7°
O4BC4BC3BH4B125.2°119.5°
O4BC4BC3BO3B173.9°120.7°
O4BC4BC3BC2B37.2°2.0°
O4BC4BC3BH3B82.5°116.6°
C4BO4BC1BC2B13.3°40.1°
C4BO4BC1BN9A117.0°158.7°
C4BO4BC1BH1B127.4°78.4°
C3BC4BO4BC1B13.5°26.5°
C4BC3BO3BC2B135.1°114.7°
C4BC3BO3BH3B106.6°122.8°
C4BC3BC2BH3B111.8°118.6°
C4BC3BO3BHO3A179.9°65.3°
C4BC3BC2BO2B58.5°139.2°
C4BC3BC2BC1B43.7°21.0°
C4BC3BC2BH2B173.8°97.2°
H4BC4BO4BC1B109.8°93.0°
H4BC4BC3BO3B48.6°1.2°
H4BC4BC3BC2B88.1°117.5°
H4BC4BC3BH3B152.2°123.9°
O4BC1BC2BC3B32.7°37.1°
O4BC1BC2BO2B74.6°155.3°
O4BC1BC2BN9A120.5°118.6°
O4BC1BC2BH1B125.2°118.5°
O4BC1BC2BH2B159.4°81.2°
O4BC1BN9AH1B125.4°122.9°
O4BC1BN9AC8A29.0°23.5°
O4BC1BN9AC4A150.9°156.7°
O3BC3BC2BH3B107.3°122.5°
O3BC3BC2BO2B82.4°20.3°
O3BC3BC2BC1B175.4°97.9°
O3BC3BC2BH2B45.3°143.9°
C2BC3BO3BHO3A44.9°180.0°
C3BC2BO2BC1B98.8°112.7°
C3BC2BO2BH2B129.8°123.7°
C3BC2BC1BH2B126.7°118.3°
C3BC2BO2BP2B151.7°127.3°
C3BC2BC1BN9A87.8°155.7°
C3BC2BC1BH1B157.9°81.4°
H3BC3BO3BHO3A73.3°57.5°
H3BC3BC2BO2B170.3°102.2°
H3BC3BC2BC1B68.1°139.6°
H3BC3BC2BH2B62.0°21.4°
O2BC2BC1BH2B126.0°123.6°
O2BC2BC1BN9A164.8°86.1°
O2BC2BC1BH1B50.6°36.8°
C2BO2BP2BO1X70.3°55.0°
C2BO2BP2BO2X169.7°65.0°
C2BO2BP2BO3X49.7°175.0°
C1BC2BO2BP2B109.5°120.0°
C2BC1BN9AH1B112.8°122.9°
C2BC1BN9AC8A92.8°90.6°
C2BC1BN9AC4A87.3°89.2°
H2BC2BO2BP2B21.9°3.6°
H2BC2BC1BN9A38.9°37.4°
H2BC2BC1BH1B75.4°160.3°
O2BP2BO1XO2X112.7°119.9°
O2BP2BO1XO3X112.7°120.0°
O2BP2BO2XO3X112.6°120.0°
O2BP2BO2XHOP2180.0°60.1°
O2BP2BO3XHOP3180.0°180.0°
C1BN9AC8AC4A179.9°179.8°
C1BN9AC8AN7A179.9°180.0°
C1BN9AC8AH8A0.1°0.0°
C1BN9AC4AC5A179.8°179.9°
C1BN9AC4AN3A0.1°0.7°
H1BC1BN9AC8A154.3°146.4°
H1BC1BN9AC4A25.6°33.8°
N9AC8AN7AH8A180.0°180.0°
N9AC8AN7AC5A0.1°0.0°
C8AN9AC4AC5A0.1°0.3°
C8AN9AC4AN3A180.0°179.5°
C4AN9AC8AN7A0.0°0.2°
C4AN9AC8AH8A180.0°179.8°
N9AC4AC5AN7A0.1°0.3°
N9AC4AC5AC6A179.9°179.8°
N9AC4AC5AN3A179.9°179.4°
N9AC4AN3AC2A180.0°179.7°
C8AN7AC5AC6A179.8°180.0°
C8AN7AC5AC4A0.1°0.2°
H8AC8AN7AC5A179.9°180.0°
N7AC5AC6AC4A179.7°179.8°
N7AC5AC6AO6A0.3°0.1°
N7AC5AC6AN1A179.9°179.9°
N7AC5AC4AN3A180.0°179.7°
C5AC6AO6AN1A179.8°180.0°
C5AC6AO6AHO6A179.9°90.0°
C5AC6AN1AC2A0.2°0.0°
C6AC5AC4AN3A0.2°0.5°
C4AC5AC6AO6A180.0°179.7°
C4AC5AC6AN1A0.2°0.2°
C5AC4AN3AC2A0.1°0.5°
O6AC6AN1AC2A180.0°179.9°
N1AC6AO6AHO6A0.3°90.0°
C6AN1AC2AN3A0.0°0.1°
C6AN1AC2AH2A180.0°180.0°
N1AC2AN3AH2A180.0°179.9°
N1AC2AN3AC4A0.0°0.3°
H2AC2AN3AC4A180.0°179.8°
O3PNO1NO2N134.7°120.0°
O3PNO1NO5D113.4°120.0°
O3PNO2NO5D120.3°120.0°
O3PNO5DC5D29.0°175.0°
O1NPNO2NO5D110.0°120.0°
O1NPNO5DC5D82.8°65.0°
O2NPNO5DC5D155.1°55.0°
PNO5DC5DC4D104.9°180.0°
PNO5DC5DH51N129.9°60.0°
PNO5DC5DH52N20.4°60.0°
O5DC5DC4DH51N125.3°120.0°
O5DC5DC4DH52N125.3°120.0°
O5DC5DH51NH52N113.4°120.0°
O5DC5DC4DO4D131.6°66.4°
O5DC5DC4DC3D16.7°178.1°
O5DC5DC4DH4D113.1°55.8°
C4DC5DH51NH52N113.3°120.0°
C5DC4DO4DC3D122.6°119.0°
C5DC4DO4DH4D106.6°122.2°
C5DC4DC3DH4D107.9°122.3°
C5DC4DO4DC1D152.4°159.5°
C5DC4DC3DO3D89.3°98.3°
C5DC4DC3DC2D155.8°143.0°
C5DC4DC3DH3D32.0°24.2°
H51NC5DC4DO4D103.2°173.5°
H51NC5DC4DC3D141.9°58.1°
H51NC5DC4DH4D12.2°64.2°
H52NC5DC4DO4D6.3°53.6°
H52NC5DC4DC3D108.6°61.9°
H52NC5DC4DH4D121.7°175.8°
O4DC4DC3DH4D117.8°118.8°
O4DC4DC3DO3D136.5°142.8°
O4DC4DC3DC2D21.6°24.1°
O4DC4DC3DH3D102.2°94.7°
C4DO4DC1DC2D17.7°40.4°
C4DO4DC1DN1N140.4°159.3°
C4DO4DC1DH1D121.4°78.5°
C3DC4DO4DC1D29.8°40.5°
C4DC3DO3DC2D108.3°114.7°
C4DC3DO3DH3D126.6°122.6°
C4DC3DC2DH3D125.7°118.7°
C4DC3DO3DHO3N180.0°180.0°
C4DC3DC2DO2D97.7°118.8°
C4DC3DC2DC1D18.1°0.2°
C4DC3DC2DH2D141.5°118.6°
H4DC4DO4DC1D100.9°78.3°
H4DC4DC3DO3D18.7°24.0°
H4DC4DC3DC2D96.3°94.7°
H4DC4DC3DH3D139.9°146.5°
O4DC1DC2DC3D5.8°23.8°
O4DC1DC2DO2D114.7°142.6°
O4DC1DC2DN1N143.6°118.9°
O4DC1DC2DH1D113.7°118.9°
O4DC1DC2DH2D124.8°94.7°
O4DC1DN1NH1D106.3°122.2°
O4DC1DN1NC2N96.3°142.6°
O4DC1DN1NC6N83.5°37.1°
O3DC3DC2DH3D121.6°122.6°
O3DC3DC2DO2D14.9°0.1°
O3DC3DC2DC1D130.8°118.8°
O3DC3DC2DH2D105.9°122.7°
C2DC3DO3DHO3N71.7°65.3°
C3DC2DO2DC1D117.6°114.7°
C3DC2DO2DH2D119.2°122.6°
C3DC2DC1DH2D119.0°118.5°
C3DC2DO2DHO2N180.0°61.4°
C3DC2DC1DN1N137.9°142.7°
C3DC2DC1DH1D119.5°95.1°
H3DC3DO3DHO3N53.4°57.4°
H3DC3DC2DO2D136.6°122.5°
H3DC3DC2DC1D107.6°118.6°
H3DC3DC2DH2D15.8°0.1°
O2DC2DC1DH2D120.5°122.7°
O2DC2DC1DN1N101.7°98.5°
O2DC2DC1DH1D0.9°23.7°
C1DC2DO2DHO2N62.4°176.1°
C2DC1DN1NH1D137.4°122.2°
C2DC1DN1NC2N147.4°101.8°
C2DC1DN1NC6N32.8°78.5°
H2DC2DO2DHO2N60.8°61.2°
H2DC2DC1DN1N18.8°24.2°
H2DC2DC1DH1D121.5°146.4°
C1DN1NC2NC6N179.8°179.7°
C1DN1NC2NC3N179.9°179.6°
C1DN1NC2NH2N0.1°0.4°
C1DN1NC6NC5N180.0°179.9°
C1DN1NC6NH6N0.1°0.0°
H1DC1DN1NC2N10.1°20.4°
H1DC1DN1NC6N170.1°159.3°
N1NC2NC3NH2N180.0°179.3°
N1NC2NC3NC7N179.9°179.7°
N1NC2NC3NC4N0.1°0.6°
C2NN1NC6NC5N0.2°0.4°
C2NN1NC6NH6N179.9°179.7°
C6NN1NC2NC3N0.1°0.7°
C6NN1NC2NH2N179.9°180.0°
N1NC6NC5NC4N0.1°0.1°
N1NC6NC5NH6N179.9°179.9°
N1NC6NC5NH5N179.8°179.9°
C2NC3NC7NC4N179.8°179.7°
C2NC3NC7NO7N3.6°0.3°
C2NC3NC7NN7N176.7°179.7°
C2NC3NC4NC5N0.1°0.3°
C2NC3NC4NH4N179.8°179.7°
H2NC2NC3NC7N0.1°0.4°
H2NC2NC3NC4N179.9°179.9°
C3NC7NO7NN7N179.7°180.0°
C3NC7NN7NH71N0.3°180.0°
C3NC7NN7NH72N180.0°0.2°
C7NC3NC4NC5N179.9°180.0°
C7NC3NC4NH4N0.0°0.0°
C4NC3NC7NO7N176.2°180.0°
C4NC3NC7NN7N3.5°0.0°
C3NC4NC5NH4N180.0°180.0°
C3NC4NC5NC6N0.0°0.0°
C3NC4NC5NH5N180.0°179.9°
O7NC7NN7NH71N180.0°0.0°
O7NC7NN7NH72N0.3°179.7°
C7NN7NH71NH72N179.7°179.7°
C4NC5NC6NH5N180.0°180.0°
C4NC5NC6NH6N179.9°180.0°
H4NC4NC5NC6N179.9°180.0°
H4NC4NC5NH5N0.0°0.0°
H5NC5NC6NH6N0.1°0.0°
O1XP2BO2XO3X134.6°120.0°
O1XP2BO2XHOP267.2°180.0°
O1XP2BO3XHOP367.1°60.0°
O2XP2BO3XHOP367.4°60.0°
O3XP2BO2XHOP267.4°60.0°

223790

PDB entries from 2024-08-14

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