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Summary Geometry Related PDB entries

ND4

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N	D1	sing	0.00Å	1.00Å
N	D2	sing	0.00Å	1.00Å
N	D3	sing	0.00Å	1.00Å
N	D4	sing	0.00Å	1.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
D1	N	D2	109.0°	90.0°
D1	N	D3	109.5°	90.0°
D1	N	D4	109.9°	90.0°
D2	N	D3	110.7°	90.0°
D2	N	D4	108.9°	90.0°
D3	N	D4	108.8°	90.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
D1	N	D2	D3	120.5°	90.0°
D1	N	D2	D4	119.9°	90.0°
D1	N	D3	D4	120.2°	90.0°
D2	N	D3	D4	119.6°	90.0°

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PDB entries from 2026-02-04

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