Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

NBV

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O9C12sing1.43Å1.46Å
O9H9sing0.97Å0.95Å
C12C11sing1.53Å1.56Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
C11C10sing1.53Å1.53Å
C11N1sing1.47Å1.47Å
C11H11sing1.09Å1.10Å
C10O1sing1.43Å1.46Å
C10C9sing1.53Å1.54Å
C10H10sing1.09Å1.10Å
O1H1sing0.97Å0.95Å
C9O8sing1.43Å1.43Å
C9C8sing1.53Å1.54Å
C9HAsing1.09Å1.10Å
O8H8sing0.97Å0.95Å
C8O7sing1.43Å1.43Å
C8C7sing1.53Å1.52Å
C8HBsing1.09Å1.10Å
O7H7sing0.97Å0.95Å
N1C7sing1.47Å1.49Å
N1C13sing1.47Å1.48Å
C7H7C1sing1.09Å1.10Å
C7H7C2sing1.09Å1.10Å
C13C14sing1.53Å1.54Å
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C14C15sing1.53Å1.55Å
C14H141sing1.09Å1.10Å
C14H142sing1.09Å1.10Å
C15C16sing1.53Å1.55Å
C15H151sing1.09Å1.10Å
C15H152sing1.09Å1.10Å
C16H161sing1.09Å1.10Å
C16H162sing1.09Å1.10Å
C16H163sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C12O9H9109.5°114.1°
O9C12C11111.7°109.5°
O9C12H121108.8°109.4°
O9C12H122108.2°109.5°
C11C12H121108.8°109.5°
C11C12H122108.3°109.5°
C12C11C10112.2°109.5°
C12C11N1111.5°109.4°
C12C11H11105.3°109.5°
H121C12H122111.2°109.5°
C10C11N1106.6°109.5°
C10C11H11110.3°109.5°
C11C10O1112.1°109.5°
C11C10C9111.4°109.3°
C11C10H10106.8°109.5°
N1C11H11111.0°109.4°
C11N1C7111.0°111.2°
C11N1C13111.1°111.0°
O1C10C9111.0°109.5°
O1C10H10107.3°109.5°
C10O1H1109.5°114.0°
C9C10H10108.0°109.6°
C10C9O8111.1°109.5°
C10C9C8111.8°109.2°
C10C9HA105.9°109.5°
O8C9C8106.7°109.5°
O8C9HA111.1°109.5°
C9O8H8109.5°114.1°
C8C9HA110.3°109.6°
C9C8O7106.6°109.5°
C9C8C7112.9°109.2°
C9C8HB109.0°109.5°
O7C8C7109.1°109.5°
O7C8HB112.8°109.5°
C8O7H7109.5°114.1°
C7C8HB106.5°109.5°
C8C7N1113.6°109.5°
C8C7H7C1108.1°109.4°
C8C7H7C2107.2°109.5°
C7N1C13116.2°111.0°
N1C7H7C1108.1°109.4°
N1C7H7C2107.2°109.5°
N1C13C14112.0°109.5°
N1C13H131108.6°109.5°
N1C13H132108.1°109.4°
H7C1C7H7C2112.7°109.5°
C14C13H131108.6°109.5°
C14C13H132108.1°109.5°
C13C14C15109.5°109.5°
C13C14H141109.5°109.5°
C13C14H142109.4°109.5°
H131C13H132111.5°109.5°
C15C14H141109.5°109.4°
C15C14H142109.4°109.5°
C14C15C16112.5°109.5°
C14C15H151108.5°109.4°
C14C15H152107.8°109.4°
H141C14H142109.5°109.4°
C16C15H151108.5°109.5°
C16C15H152107.8°109.5°
C15C16H161109.5°109.5°
C15C16H162109.5°109.4°
C15C16H163109.5°109.5°
H151C15H152111.8°109.5°
H161C16H162109.5°109.5°
H161C16H163109.4°109.5°
H162C16H163109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O9C12C11H121120.0°119.9°
O9C12C11H122119.0°120.0°
O9C12H121H122119.1°120.0°
O9C12C11C1065.1°56.5°
O9C12C11N154.5°63.5°
O9C12C11H11175.0°176.5°
H9O9C12C11133.3°180.0°
H9O9C12H121106.7°60.1°
H9O9C12H12214.2°59.9°
C11C12H121H122119.1°120.1°
C12C11C10N1122.4°120.0°
C12C11C10H11117.0°120.1°
C12C11N1H11117.1°120.0°
C12C11C10O149.6°60.9°
C12C11C10C9174.6°179.2°
C12C11C10H1067.6°59.2°
C12C11N1C7171.6°178.2°
C12C11N1C1340.6°54.2°
H121C12C11C1055.0°63.4°
H121C12C11N1174.5°176.6°
H121C12C11H1165.0°56.6°
H122C12C11C10175.9°176.5°
H122C12C11N164.6°56.5°
H122C12C11H1155.9°63.5°
C10C11N1H11120.2°120.0°
C11C10O1C9125.3°119.8°
C11C10O1H10117.0°120.1°
C11C10C9H10117.0°120.0°
C11C10O1H1101.9°180.0°
C11C10C9O8170.8°177.6°
C11C10C9C851.7°57.7°
C11C10C9HA68.5°62.3°
C10C11N1C765.6°61.8°
C10C11N1C13163.4°174.2°
N1C11C10O1171.9°179.1°
N1C11C10C963.0°59.2°
N1C11C10H1054.7°60.8°
C11N1C7C858.2°61.8°
C11N1C7C13128.3°124.0°
C11N1C7H7C1178.2°178.2°
C11N1C7H7C260.0°58.3°
C11N1C13C14176.6°173.0°
C11N1C13H13156.6°67.0°
C11N1C13H13264.4°53.0°
H11C11C10O167.4°59.2°
H11C11C10C957.6°60.8°
H11C11C10H10175.4°179.2°
H11C11N1C754.6°58.2°
H11C11N1C1376.4°65.8°
O1C10C9H10117.3°120.1°
O1C10C9O863.6°62.5°
O1C10C9C8177.3°177.6°
O1C10C9HA57.2°57.6°
C9C10O1H123.4°60.2°
C10C9O8C8122.1°119.7°
C10C9O8HA117.6°120.1°
C10C9C8HA117.6°119.9°
C10C9O8H879.1°180.0°
C10C9C8O7161.5°177.6°
C10C9C8C741.7°57.7°
C10C9C8HB76.5°62.3°
H10C10O1H1141.2°59.9°
H10C10C9O853.8°57.6°
H10C10C9C865.3°62.3°
H10C10C9HA174.5°177.7°
O8C9C8HA120.8°120.2°
O8C9C8O776.9°62.5°
O8C9C8C7163.3°177.6°
O8C9C8HB45.2°57.6°
C8C9O8H843.0°60.3°
C9C8O7C7122.2°119.7°
C9C8O7HB119.6°120.1°
C9C8C7HB119.6°120.0°
C9C8O7H7167.7°180.0°
C9C8C7N144.9°59.2°
C9C8C7H7C1164.9°179.2°
C9C8C7H7C273.3°60.8°
HAC9O8H8163.3°59.9°
HAC9C8O743.9°57.6°
HAC9C8C775.9°62.3°
HAC9C8HB166.0°177.8°
O7C8C7HB122.0°120.1°
O7C8C7N1163.2°179.2°
O7C8C7H7C176.8°60.9°
O7C8C7H7C245.0°59.1°
C7C8O7H745.5°60.2°
C8C7N1H7C1120.0°120.0°
C8C7N1H7C2118.2°120.1°
C8C7N1C13173.5°174.1°
C8C7H7C1H7C2118.3°120.0°
HBC8O7H772.7°59.9°
HBC8C7N174.7°60.7°
HBC8C7H7C145.3°59.2°
HBC8C7H7C2167.1°179.2°
N1C7H7C1H7C2118.3°120.0°
C7N1C13C1448.4°62.9°
C7N1C13H13171.6°57.1°
C7N1C13H132167.3°177.1°
C13N1C7H7C153.5°54.2°
C13N1C7H7C268.3°65.8°
N1C13C14H131120.0°120.0°
N1C13C14H132118.9°120.0°
N1C13H131H132119.0°120.0°
N1C13C14C15154.1°180.0°
N1C13C14H14134.0°60.0°
N1C13C14H14286.0°60.0°
C14C13H131H132119.0°120.0°
C13C14C15H141120.0°120.0°
C13C14C15H142120.0°120.1°
C13C14H141H142120.0°120.0°
C13C14C15C16177.3°180.0°
C13C14C15H15157.3°60.0°
C13C14C15H15264.0°60.0°
H131C13C14C1586.0°60.0°
H131C13C14H141154.0°180.0°
H131C13C14H14234.0°60.1°
H132C13C14C1535.1°60.0°
H132C13C14H14184.9°60.0°
H132C13C14H142155.1°180.0°
C15C14H141H142120.0°119.9°
C14C15C16H151120.0°120.0°
C14C15C16H152118.7°120.0°
C14C15H151H152118.7°119.9°
C14C15C16H161142.3°60.0°
C14C15C16H16222.3°180.0°
C14C15C16H16397.7°60.0°
H141C14C15C1662.7°59.9°
H141C14C15H151177.3°180.0°
H141C14C15H15256.0°60.1°
H142C14C15C1657.3°60.0°
H142C14C15H15162.7°60.1°
H142C14C15H152176.0°180.0°
C16C15H151H152118.8°120.0°
C15C16H161H162120.0°119.9°
C15C16H161H163120.0°120.0°
C15C16H162H163120.0°120.0°
H151C15C16H16197.7°60.0°
H151C15C16H162142.3°60.0°
H151C15C16H16322.3°180.0°
H152C15C16H16123.6°180.0°
H152C15C16H16296.4°60.0°
H152C15C16H163143.6°60.0°
H161C16H162H163120.0°120.0°

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon