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NBO

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.51Å1.50Å
O1C2doub1.21Å1.20Å
C2C3sing1.51Å1.51Å
C3C4sing1.53Å1.53Å
C4C1'sing1.51Å1.50Å
C10'C1'doub1.39Å1.36ÅAromatic
C10'C9'sing1.36Å1.38ÅAromatic
C1'C2'sing1.36Å1.36ÅAromatic
C11'O2'sing1.43Å1.37Å
C2'C3'doub1.40Å1.37ÅAromatic
O2'C6'sing1.36Å1.35Å
C3'C4'sing1.41Å1.37ÅAromatic
C3'C8'sing1.42Å1.37ÅAromatic
C4'C5'doub1.36Å1.35ÅAromatic
C5'C6'sing1.40Å1.35ÅAromatic
C6'C7'doub1.37Å1.37ÅAromatic
C7'C8'sing1.40Å1.37ÅAromatic
C8'C9'doub1.41Å1.38ÅAromatic
C1H1sing1.09Å1.10Å
C1H1Asing1.09Å1.10Å
C1H1Bsing1.09Å1.10Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
C10'H10'sing1.08Å1.08Å
C11'H11'sing1.09Å1.10Å
C11'H11Asing1.09Å1.10Å
C11'H11Bsing1.09Å1.10Å
C2'H2'sing1.08Å1.08Å
C4'H4'sing1.08Å1.08Å
C5'H5'sing1.08Å1.08Å
C7'H7'sing1.08Å1.08Å
C9'H9'sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2O1126.8°120.0°
C1C2C3119.6°120.0°
C2C1H1109.5°109.4°
C2C1H1A109.4°109.5°
C2C1H1B109.5°109.5°
O1C2C3113.6°120.0°
C2C3C499.5°109.5°
C2C3H3113.0°109.5°
C2C3H3A113.0°109.5°
C3C4C1'113.5°109.5°
C4C3H3112.9°109.5°
C4C3H3A113.0°109.5°
C3C4H4108.2°109.4°
C3C4H4A108.1°109.4°
C4C1'C10'122.0°119.5°
C4C1'C2'116.7°119.5°
C1'C4H4108.2°109.5°
C1'C4H4A108.2°109.5°
C1'C10'C9'119.3°121.0°
C10'C1'C2'121.4°121.0°
C1'C10'H10'120.4°119.6°
C10'C9'C8'119.1°119.7°
C9'C10'H10'120.4°119.5°
C10'C9'H9'120.4°120.2°
C1'C2'C3'120.2°119.6°
C1'C2'H2'119.9°120.2°
C11'O2'C6'116.0°117.0°
O2'C11'H11'109.5°109.5°
O2'C11'H11A109.5°109.5°
O2'C11'H11B109.4°109.5°
C2'C3'C4'119.0°121.2°
C2'C3'C8'119.0°119.4°
C3'C2'H2'119.9°120.2°
O2'C6'C5'119.8°119.6°
O2'C6'C7'119.4°119.5°
C4'C3'C8'122.0°119.4°
C3'C4'C5'118.7°119.8°
C3'C4'H4'120.6°120.1°
C3'C8'C7'117.9°119.4°
C3'C8'C9'121.1°119.3°
C4'C5'C6'120.3°120.9°
C5'C4'H4'120.6°120.1°
C4'C5'H5'119.9°119.6°
C5'C6'C7'120.6°120.9°
C6'C5'H5'119.8°119.5°
C6'C7'C8'120.3°119.6°
C6'C7'H7'119.9°120.2°
C7'C8'C9'121.1°121.3°
C8'C7'H7'119.9°120.2°
C8'C9'H9'120.5°120.1°
H1C1H1A109.5°109.5°
H1C1H1B109.5°109.4°
H1AC1H1B109.5°109.5°
H3C3H3A105.8°109.4°
H4C4H4A110.7°109.5°
H11'C11'H11A109.5°109.5°
H11'C11'H11B109.4°109.5°
H11AC11'H11B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2O1C3179.7°180.0°
C1C2C3C4167.0°180.0°
C2C1H1H1A120.0°120.0°
C2C1H1H1B120.0°120.0°
C2C1H1AH1B120.0°120.1°
C1C2C3H347.0°60.0°
C1C2C3H3A73.0°60.0°
O1C2C3C413.3°0.0°
O1C2C1H10.0°0.0°
O1C2C1H1A120.0°120.0°
O1C2C1H1B120.0°120.0°
O1C2C3H3133.3°120.0°
O1C2C3H3A106.7°120.0°
C2C3C4H3120.0°120.0°
C2C3C4H3A120.0°120.0°
C2C3C4C1'129.5°180.0°
C3C2C1H1179.6°180.0°
C3C2C1H1A59.6°60.0°
C3C2C1H1B60.4°60.1°
C2C3H3H3A124.1°120.0°
C2C3C4H4110.5°60.0°
C2C3C4H4A9.5°60.0°
C3C4C1'H4120.0°120.0°
C3C4C1'H4A120.0°120.0°
C3C4C1'C10'1.1°90.0°
C3C4C1'C2'177.9°90.1°
C4C3H3H3A124.0°120.0°
C3C4H4H4A118.3°120.0°
C4C1'C10'C2'178.9°179.9°
C4C1'C10'C9'179.6°180.0°
C4C1'C2'C3'179.2°180.0°
C1'C4C3H39.5°60.0°
C1'C4C3H3A110.5°60.0°
C1'C4H4H4A118.4°120.1°
C4C1'C10'H10'0.4°0.3°
C4C1'C2'H2'0.8°0.1°
C1'C10'C9'H10'180.0°179.7°
C10'C1'C2'C3'0.3°0.1°
C1'C10'C9'C8'1.1°0.0°
C10'C1'C4H4121.1°29.9°
C10'C1'C4H4A118.9°150.0°
C10'C1'C2'H2'179.7°180.0°
C1'C10'C9'H9'178.9°180.0°
C9'C10'C1'C2'0.7°0.1°
C10'C9'C8'C3'1.2°0.0°
C10'C9'C8'C7'179.7°180.0°
C10'C9'C8'H9'180.0°180.0°
C1'C2'C3'H2'180.0°179.9°
C1'C2'C3'C4'179.3°179.9°
C1'C2'C3'C8'0.3°0.0°
C2'C1'C4H457.9°150.0°
C2'C1'C4H4A62.1°29.9°
C2'C1'C10'H10'179.3°179.8°
C11'O2'C6'C5'87.2°0.0°
C11'O2'C6'C7'89.2°180.0°
O2'C11'H11'H11A120.0°120.0°
O2'C11'H11'H11B120.0°120.0°
O2'C11'H11AH11B120.0°120.0°
C2'C3'C4'C8'179.6°180.0°
C2'C3'C4'C5'179.2°180.0°
C2'C3'C8'C7'179.9°180.0°
C2'C3'C8'C9'0.8°0.0°
C2'C3'C4'H4'0.8°0.1°
O2'C6'C5'C4'179.8°180.0°
O2'C6'C5'C7'176.4°180.0°
O2'C6'C7'C8'179.3°180.0°
C6'O2'C11'H11'180.0°180.0°
C6'O2'C11'H11A60.0°60.0°
C6'O2'C11'H11B60.0°60.0°
O2'C6'C5'H5'0.2°0.0°
O2'C6'C7'H7'0.7°0.0°
C3'C4'C5'H4'180.0°179.9°
C3'C4'C5'C6'2.9°0.0°
C4'C3'C8'C7'0.3°0.0°
C4'C3'C8'C9'178.8°180.0°
C4'C3'C2'H2'0.7°0.0°
C3'C4'C5'H5'177.1°179.9°
C8'C3'C4'C5'1.2°0.0°
C3'C8'C7'C6'1.1°0.0°
C3'C8'C7'C9'179.1°180.0°
C8'C3'C2'H2'179.6°180.0°
C8'C3'C4'H4'178.8°180.0°
C3'C8'C7'H7'178.9°180.0°
C3'C8'C9'H9'178.8°180.0°
C4'C5'C6'H5'180.0°179.9°
C4'C5'C6'C7'3.8°0.0°
C5'C6'C7'C8'2.9°0.0°
C6'C5'C4'H4'177.1°180.0°
C5'C6'C7'H7'177.1°180.0°
C6'C7'C8'H7'180.0°180.0°
C6'C7'C8'C9'178.0°180.0°
C7'C6'C5'H5'176.2°179.9°
C7'C8'C9'H9'0.3°0.0°
C8'C9'C10'H10'178.9°179.7°
C9'C8'C7'H7'2.0°0.0°
H1C1H1AH1B120.0°120.0°
H3C3C4H4129.5°180.0°
H3C3C4H4A110.6°60.0°
H3AC3C4H49.5°60.0°
H3AC3C4H4A129.5°180.0°
H10'C10'C9'H9'1.1°0.3°
H11'C11'H11AH11B120.0°120.0°
H4'C4'C5'H5'2.9°0.0°

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PDB entries from 2024-07-17

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