Obsolete: NAM
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.47Å | 1.46Å | |
N | H | sing | 1.01Å | 1.02Å | |
N | H2 | sing | 1.01Å | 1.02Å | |
CA | CB | sing | 1.53Å | 1.54Å | |
CA | C | sing | 1.51Å | 1.53Å | |
CA | HA | sing | 1.09Å | 1.12Å | |
CB | CG | sing | 1.51Å | 1.52Å | |
CB | HB2 | sing | 1.09Å | 1.11Å | |
CB | HB3 | sing | 1.09Å | 1.12Å | |
C | O | doub | 1.21Å | 1.25Å | |
C | NXT | sing | 1.35Å | 1.32Å | |
NXT | HNX1 | sing | 0.97Å | 1.02Å | |
NXT | HNX2 | sing | 0.97Å | 1.02Å | |
CG | CD1 | doub | 1.36Å | 1.39Å | Aromatic |
CG | CD2 | sing | 1.40Å | 1.39Å | Aromatic |
CD1 | CE1 | sing | 1.39Å | 1.39Å | Aromatic |
CD1 | HD1 | sing | 1.08Å | 1.10Å | |
CE1 | CZ1 | doub | 1.36Å | 1.39Å | Aromatic |
CE1 | HE1 | sing | 1.08Å | 1.10Å | |
CZ1 | CE2 | sing | 1.41Å | 1.40Å | Aromatic |
CZ1 | HZ1 | sing | 1.08Å | 1.10Å | |
CE2 | CH1 | sing | 1.40Å | 1.39Å | Aromatic |
CE2 | CD2 | doub | 1.42Å | 1.42Å | Aromatic |
CH1 | CP | doub | 1.36Å | 1.38Å | Aromatic |
CH1 | HH1 | sing | 1.08Å | 1.10Å | |
CP | CH2 | sing | 1.39Å | 1.37Å | Aromatic |
CP | HP | sing | 1.08Å | 1.10Å | |
CH2 | CZ2 | doub | 1.36Å | 1.38Å | Aromatic |
CH2 | HH2 | sing | 1.08Å | 1.10Å | |
CZ2 | CD2 | sing | 1.41Å | 1.40Å | Aromatic |
CZ2 | HZ2 | sing | 1.08Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H | 110.7° | 106.7° |
CA | N | H2 | 111.8° | 106.7° |
N | CA | CB | 110.6° | 109.5° |
N | CA | C | 106.4° | 109.4° |
N | CA | HA | 110.6° | 109.4° |
H | N | H2 | 111.7° | 106.7° |
CB | CA | C | 109.2° | 109.5° |
CB | CA | HA | 107.9° | 109.5° |
CA | CB | CG | 114.4° | 109.5° |
CA | CB | HB2 | 110.4° | 109.4° |
CA | CB | HB3 | 110.4° | 109.4° |
C | CA | HA | 112.1° | 109.6° |
CA | C | O | 115.9° | 120.1° |
CA | C | NXT | 119.2° | 119.9° |
CG | CB | HB2 | 110.4° | 109.5° |
CG | CB | HB3 | 110.4° | 109.5° |
CB | CG | CD1 | 120.9° | 120.2° |
CB | CG | CD2 | 120.7° | 120.2° |
HB2 | CB | HB3 | 99.9° | 109.5° |
O | C | NXT | 119.7° | 120.0° |
C | NXT | HNX1 | 119.7° | 120.0° |
C | NXT | HNX2 | 119.2° | 120.0° |
HNX1 | NXT | HNX2 | 116.0° | 120.0° |
CD1 | CG | CD2 | 118.4° | 119.6° |
CG | CD1 | CE1 | 121.5° | 121.0° |
CG | CD1 | HD1 | 119.4° | 119.5° |
CG | CD2 | CE2 | 120.7° | 119.4° |
CG | CD2 | CZ2 | 119.9° | 121.3° |
CE1 | CD1 | HD1 | 119.1° | 119.5° |
CD1 | CE1 | CZ1 | 120.8° | 121.0° |
CD1 | CE1 | HE1 | 119.6° | 119.5° |
CZ1 | CE1 | HE1 | 119.6° | 119.5° |
CE1 | CZ1 | CE2 | 119.1° | 119.6° |
CE1 | CZ1 | HZ1 | 120.0° | 120.2° |
CE2 | CZ1 | HZ1 | 120.9° | 120.2° |
CZ1 | CE2 | CH1 | 120.9° | 121.2° |
CZ1 | CE2 | CD2 | 119.5° | 119.3° |
CH1 | CE2 | CD2 | 119.6° | 119.5° |
CE2 | CH1 | CP | 119.3° | 119.6° |
CE2 | CH1 | HH1 | 120.8° | 120.3° |
CE2 | CD2 | CZ2 | 119.4° | 119.3° |
CP | CH1 | HH1 | 119.9° | 120.1° |
CH1 | CP | CH2 | 121.5° | 121.0° |
CH1 | CP | HP | 119.6° | 119.5° |
CH2 | CP | HP | 119.0° | 119.5° |
CP | CH2 | CZ2 | 120.7° | 121.0° |
CP | CH2 | HH2 | 119.4° | 119.5° |
CZ2 | CH2 | HH2 | 119.8° | 119.5° |
CH2 | CZ2 | CD2 | 119.5° | 119.7° |
CH2 | CZ2 | HZ2 | 119.3° | 120.2° |
CD2 | CZ2 | HZ2 | 121.2° | 120.2° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H | H2 | 125.3° | 113.8° |
N | CA | CB | C | 116.8° | 120.0° |
N | CA | CB | HA | 121.1° | 119.9° |
N | CA | C | HA | 121.0° | 120.0° |
N | CA | CB | CG | 46.6° | 60.0° |
N | CA | CB | HB2 | 78.6° | 60.0° |
N | CA | CB | HB3 | 171.8° | 180.0° |
N | CA | C | O | 49.9° | 29.9° |
N | CA | C | NXT | 104.7° | 150.0° |
H | N | CA | CB | 180.0° | 53.8° |
H | N | CA | C | 61.5° | 173.7° |
H | N | CA | HA | 60.4° | 66.2° |
H2 | N | CA | CB | 54.8° | 60.0° |
H2 | N | CA | C | 173.3° | 60.0° |
H2 | N | CA | HA | 64.7° | 179.9° |
CB | CA | C | HA | 119.5° | 120.1° |
CA | CB | CG | HB2 | 125.2° | 120.0° |
CA | CB | CG | HB3 | 125.2° | 120.0° |
CA | CB | HB2 | HB3 | 116.3° | 119.9° |
CB | CA | C | O | 69.6° | 90.0° |
CB | CA | C | NXT | 135.8° | 90.0° |
CA | CB | CG | CD1 | 99.9° | 90.0° |
CA | CB | CG | CD2 | 79.9° | 90.3° |
C | CA | CB | CG | 163.4° | 179.9° |
C | CA | CB | HB2 | 38.2° | 60.0° |
C | CA | CB | HB3 | 71.4° | 60.0° |
CA | C | O | NXT | 154.4° | 180.0° |
CA | C | NXT | HNX1 | 26.3° | 179.9° |
CA | C | NXT | HNX2 | 180.0° | 0.0° |
HA | CA | CB | CG | 74.5° | 59.9° |
HA | CA | CB | HB2 | 160.3° | 179.9° |
HA | CA | CB | HB3 | 50.7° | 60.1° |
HA | CA | C | O | 170.9° | 149.9° |
HA | CA | C | NXT | 16.3° | 30.0° |
CG | CB | HB2 | HB3 | 116.2° | 120.1° |
CB | CG | CD1 | CD2 | 179.7° | 179.7° |
CB | CG | CD1 | CE1 | 179.4° | 180.0° |
CB | CG | CD1 | HD1 | 0.5° | 0.1° |
CB | CG | CD2 | CE2 | 179.5° | 179.9° |
CB | CG | CD2 | CZ2 | 0.7° | 0.6° |
HB2 | CB | CG | CD1 | 25.4° | 29.9° |
HB2 | CB | CG | CD2 | 154.9° | 149.8° |
HB3 | CB | CG | CD1 | 134.9° | 150.0° |
HB3 | CB | CG | CD2 | 45.4° | 29.7° |
O | C | NXT | HNX1 | 179.9° | 0.1° |
O | C | NXT | HNX2 | 26.4° | 179.9° |
C | NXT | HNX1 | HNX2 | 154.5° | 179.9° |
CG | CD1 | CE1 | HD1 | 180.0° | 179.9° |
CG | CD1 | CE1 | CZ1 | 0.2° | 0.1° |
CG | CD1 | CE1 | HE1 | 179.8° | 179.9° |
CD1 | CG | CD2 | CE2 | 0.2° | 0.5° |
CD1 | CG | CD2 | CZ2 | 179.6° | 179.7° |
CD2 | CG | CD1 | CE1 | 0.3° | 0.3° |
CD2 | CG | CD1 | HD1 | 179.7° | 179.8° |
CG | CD2 | CE2 | CZ1 | 0.0° | 0.4° |
CG | CD2 | CE2 | CH1 | 179.8° | 179.7° |
CG | CD2 | CE2 | CZ2 | 179.8° | 179.3° |
CG | CD2 | CZ2 | CH2 | 179.7° | 179.7° |
CG | CD2 | CZ2 | HZ2 | 0.3° | 0.5° |
CD1 | CE1 | CZ1 | HE1 | 179.9° | 180.0° |
CD1 | CE1 | CZ1 | CE2 | 0.0° | 0.1° |
CD1 | CE1 | CZ1 | HZ1 | 179.9° | 180.0° |
HD1 | CD1 | CE1 | CZ1 | 179.8° | 180.0° |
HD1 | CD1 | CE1 | HE1 | 0.2° | 0.0° |
CE1 | CZ1 | CE2 | HZ1 | 179.9° | 179.9° |
CE1 | CZ1 | CE2 | CH1 | 179.7° | 179.9° |
CE1 | CZ1 | CE2 | CD2 | 0.1° | 0.2° |
HE1 | CE1 | CZ1 | CE2 | 180.0° | 179.9° |
HE1 | CE1 | CZ1 | HZ1 | 0.0° | 0.0° |
CZ1 | CE2 | CH1 | CD2 | 179.7° | 179.9° |
CZ1 | CE2 | CH1 | CP | 179.7° | 180.0° |
CZ1 | CE2 | CH1 | HH1 | 0.4° | 0.0° |
CZ1 | CE2 | CD2 | CZ2 | 179.8° | 179.7° |
HZ1 | CZ1 | CE2 | CH1 | 0.4° | 0.0° |
HZ1 | CZ1 | CE2 | CD2 | 179.9° | 179.9° |
CE2 | CH1 | CP | HH1 | 179.9° | 179.9° |
CE2 | CH1 | CP | CH2 | 0.2° | 0.2° |
CE2 | CH1 | CP | HP | 179.9° | 180.0° |
CH1 | CE2 | CD2 | CZ2 | 0.1° | 0.4° |
CD2 | CE2 | CH1 | CP | 0.1° | 0.1° |
CD2 | CE2 | CH1 | HH1 | 179.8° | 179.8° |
CE2 | CD2 | CZ2 | CH2 | 0.1° | 0.5° |
CE2 | CD2 | CZ2 | HZ2 | 179.9° | 179.8° |
CH1 | CP | CH2 | HP | 179.9° | 179.9° |
CH1 | CP | CH2 | CZ2 | 0.1° | 0.1° |
CH1 | CP | CH2 | HH2 | 179.9° | 180.0° |
HH1 | CH1 | CP | CH2 | 179.8° | 179.9° |
HH1 | CH1 | CP | HP | 0.2° | 0.0° |
CP | CH2 | CZ2 | HH2 | 180.0° | 179.9° |
CP | CH2 | CZ2 | CD2 | 0.0° | 0.2° |
CP | CH2 | CZ2 | HZ2 | 179.9° | 179.9° |
HP | CP | CH2 | CZ2 | 180.0° | 180.0° |
HP | CP | CH2 | HH2 | 0.0° | 0.1° |
CH2 | CZ2 | CD2 | HZ2 | 180.0° | 179.7° |
HH2 | CH2 | CZ2 | CD2 | 180.0° | 179.7° |
HH2 | CH2 | CZ2 | HZ2 | 0.0° | 0.0° |