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SummaryGeometryRelated PDB entries

NAK

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
OXTCsing1.22Å1.23Å
COdoub1.22Å1.23Å
CCAsing1.48Å1.53Å
CACAEsing1.51Å1.39Å
CANdoub1.28Å1.33Å
CAEHAE1sing1.09Å1.11Å
CAEHAE2sing1.09Å1.12Å
CAEHAE3sing1.09Å1.11Å
NHsing0.97Å1.02Å
NH3sing0.97Å1.02Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
OXTCO118.7°120.0°
OXTCCA119.9°120.0°
OCCA121.4°120.0°
CCACAE120.3°120.0°
CCAN118.3°120.0°
CAECAN121.3°120.0°
CACAEHAE1108.3°109.5°
CACAEHAE2120.4°109.5°
CACAEHAE3108.3°109.5°
CANH118.3°120.0°
CANH3121.3°120.0°
HAE1CAEHAE2108.3°109.5°
HAE1CAEHAE3101.6°109.5°
HAE2CAEHAE3108.4°109.5°
HNH3120.4°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
OXTCOCA179.3°180.0°
OXTCCACAE178.1°0.0°
OXTCCAN0.7°180.0°
OCCACAE1.2°180.0°
OCCAN178.6°0.0°
CCACAEN177.3°180.0°
CCACAEHAE154.8°90.0°
CCACAEHAE2180.0°30.0°
CCACAEHAE354.7°150.0°
CCANH180.0°0.0°
CCANH32.7°180.0°
CACAEHAE1HAE2132.1°120.0°
CACAEHAE1HAE3113.9°120.0°
CACAEHAE2HAE3125.3°120.0°
CAECANH2.7°180.0°
CAECANH3180.0°0.0°
NCACAEHAE1128.0°90.0°
NCACAEHAE22.8°150.0°
NCACAEHAE3122.5°30.0°
CANHH3177.3°180.0°
HAE1CAEHAE2HAE3109.5°120.0°

246704

PDB entries from 2025-12-24

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