N9P
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
NZ | CE1 | doub | 1.32Å | 1.36Å | Aromatic |
NZ | CE2 | sing | 1.32Å | 1.38Å | Aromatic |
CE1 | CD1 | sing | 1.38Å | 1.42Å | Aromatic |
CE2 | CD2 | doub | 1.38Å | 1.41Å | Aromatic |
CD1 | CG | doub | 1.39Å | 1.39Å | Aromatic |
CD2 | CG | sing | 1.39Å | 1.40Å | Aromatic |
CG | CB | sing | 1.51Å | 1.52Å | |
N | CA | sing | 1.47Å | 1.49Å | |
CB | CA | sing | 1.53Å | 1.53Å | |
CA | C | sing | 1.51Å | 1.60Å | |
C | O | doub | 1.21Å | 1.28Å | |
C | OXT | sing | 1.34Å | 1.33Å | |
N | H | sing | 1.01Å | 1.00Å | |
N | H2 | sing | 1.01Å | 1.00Å | |
CA | HA | sing | 1.09Å | 1.10Å | |
CB | H5 | sing | 1.09Å | 1.10Å | |
CB | H6 | sing | 1.09Å | 1.10Å | |
CD1 | H7 | sing | 1.08Å | 1.08Å | |
CD2 | H8 | sing | 1.08Å | 1.08Å | |
CE1 | H9 | sing | 1.08Å | 1.08Å | |
CE2 | H10 | sing | 1.08Å | 1.08Å | |
OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CE1 | NZ | CE2 | 120.2° | 121.8° |
NZ | CE1 | CD1 | 120.2° | 120.7° |
NZ | CE1 | H9 | 119.9° | 119.6° |
NZ | CE2 | CD2 | 120.5° | 120.7° |
NZ | CE2 | H10 | 119.7° | 119.7° |
CE1 | CD1 | CG | 120.2° | 119.2° |
CE1 | CD1 | H7 | 119.9° | 120.4° |
CD1 | CE1 | H9 | 119.9° | 119.6° |
CE2 | CD2 | CG | 120.0° | 119.2° |
CE2 | CD2 | H8 | 120.0° | 120.4° |
CD2 | CE2 | H10 | 119.7° | 119.6° |
CD1 | CG | CD2 | 118.9° | 118.4° |
CD1 | CG | CB | 121.0° | 120.8° |
CG | CD1 | H7 | 119.9° | 120.4° |
CD2 | CG | CB | 120.1° | 120.8° |
CG | CD2 | H8 | 120.0° | 120.4° |
CG | CB | CA | 110.7° | 109.4° |
CG | CB | H5 | 109.2° | 109.4° |
CG | CB | H6 | 109.2° | 109.5° |
N | CA | CB | 113.2° | 109.5° |
N | CA | C | 105.2° | 109.5° |
CA | N | H | 109.5° | 111.0° |
CA | N | H2 | 109.5° | 111.0° |
N | CA | HA | 109.7° | 109.5° |
CB | CA | C | 111.1° | 109.5° |
CB | CA | HA | 109.2° | 109.5° |
CA | CB | H5 | 109.2° | 109.5° |
CA | CB | H6 | 109.2° | 109.5° |
CA | C | O | 118.4° | 119.9° |
CA | C | OXT | 117.7° | 120.0° |
C | CA | HA | 108.2° | 109.5° |
O | C | OXT | 124.0° | 120.1° |
C | OXT | HXT | 109.5° | 117.0° |
H | N | H2 | 109.4° | 111.0° |
H5 | CB | H6 | 109.4° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
NZ | CE1 | CD1 | H9 | 180.0° | 180.0° |
CE1 | NZ | CE2 | CD2 | 0.6° | 0.3° |
NZ | CE1 | CD1 | CG | 0.0° | 0.0° |
NZ | CE1 | CD1 | H7 | 180.0° | 180.0° |
CE1 | NZ | CE2 | H10 | 179.3° | 179.7° |
CE2 | NZ | CE1 | CD1 | 0.4° | 0.3° |
NZ | CE2 | CD2 | H10 | 180.0° | 179.9° |
NZ | CE2 | CD2 | CG | 0.4° | 0.0° |
NZ | CE2 | CD2 | H8 | 179.6° | 180.0° |
CE2 | NZ | CE1 | H9 | 179.6° | 179.7° |
CE1 | CD1 | CG | H7 | 180.0° | 180.0° |
CE1 | CD1 | CG | CD2 | 0.3° | 0.3° |
CE1 | CD1 | CG | CB | 179.4° | 180.0° |
CE2 | CD2 | CG | CD1 | 0.1° | 0.3° |
CE2 | CD2 | CG | H8 | 180.0° | 179.9° |
CE2 | CD2 | CG | CB | 179.2° | 180.0° |
CD1 | CG | CD2 | CB | 179.1° | 179.7° |
CD1 | CG | CB | CA | 145.8° | 90.0° |
CD1 | CG | CB | H5 | 94.0° | 30.0° |
CD1 | CG | CB | H6 | 25.6° | 150.0° |
CD1 | CG | CD2 | H8 | 179.9° | 179.7° |
CG | CD1 | CE1 | H9 | 180.0° | 180.0° |
CD2 | CG | CB | CA | 33.3° | 90.3° |
CD2 | CG | CB | H5 | 86.9° | 149.7° |
CD2 | CG | CB | H6 | 153.5° | 29.7° |
CD2 | CG | CD1 | H7 | 179.7° | 179.7° |
CG | CD2 | CE2 | H10 | 179.6° | 179.9° |
CG | CB | CA | N | 50.8° | 65.0° |
CG | CB | CA | H5 | 120.2° | 119.9° |
CG | CB | CA | H6 | 120.2° | 120.0° |
CG | CB | CA | C | 168.9° | 175.0° |
CG | CB | CA | HA | 71.8° | 55.0° |
CG | CB | H5 | H6 | 119.4° | 120.0° |
CB | CG | CD1 | H7 | 0.6° | 0.0° |
CB | CG | CD2 | H8 | 0.8° | 0.0° |
N | CA | CB | C | 118.2° | 120.0° |
N | CA | CB | HA | 122.5° | 120.0° |
N | CA | C | HA | 117.2° | 120.0° |
N | CA | C | O | 135.4° | 20.0° |
N | CA | C | OXT | 45.4° | 160.0° |
CA | N | H | H2 | 120.0° | 124.0° |
N | CA | CB | H5 | 171.0° | 55.0° |
N | CA | CB | H6 | 69.4° | 175.0° |
CB | CA | C | HA | 119.9° | 120.0° |
CB | CA | C | O | 101.7° | 100.0° |
CB | CA | C | OXT | 77.4° | 80.0° |
CB | CA | N | H | 180.0° | 176.0° |
CB | CA | N | H2 | 60.0° | 60.0° |
CA | CB | H5 | H6 | 119.4° | 120.0° |
CA | C | O | OXT | 179.1° | 180.0° |
C | CA | N | H | 58.5° | 64.0° |
C | CA | N | H2 | 61.5° | 60.0° |
C | CA | CB | H5 | 70.9° | 65.0° |
C | CA | CB | H6 | 48.7° | 55.0° |
CA | C | OXT | HXT | 179.1° | 180.0° |
O | C | CA | HA | 18.2° | 140.0° |
O | C | OXT | HXT | 0.0° | 0.0° |
OXT | C | CA | HA | 162.7° | 40.0° |
H | N | CA | HA | 57.8° | 56.0° |
H2 | N | CA | HA | 177.8° | 180.0° |
HA | CA | CB | H5 | 48.5° | 175.0° |
HA | CA | CB | H6 | 168.1° | 65.0° |
H7 | CD1 | CE1 | H9 | 0.0° | 0.0° |
H8 | CD2 | CE2 | H10 | 0.4° | 0.0° |