N8M
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N2 | CG | sing | 1.47Å | 1.48Å | |
| CG | HG | sing | 1.09Å | 1.10Å | |
| CG | HGA | sing | 1.09Å | 1.10Å | |
| CG | HGB | sing | 1.09Å | 1.10Å | |
| CE | N2 | sing | 1.47Å | 1.48Å | |
| N2 | C5' | sing | 1.47Å | 1.48Å | |
| CE | HE | sing | 1.09Å | 1.10Å | |
| CE | HEA | sing | 1.09Å | 1.10Å | |
| CE | HEB | sing | 1.09Å | 1.10Å | |
| C4' | C5' | sing | 1.53Å | 1.52Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| O4' | C4' | sing | 1.44Å | 1.47Å | |
| C4' | C3' | sing | 1.54Å | 1.52Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C1' | O4' | sing | 1.44Å | 1.42Å | |
| N9 | C1' | sing | 1.47Å | 1.47Å | |
| C1' | C2' | sing | 1.54Å | 1.52Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C8 | N9 | sing | 1.36Å | 1.38Å | Aromatic |
| N9 | C4 | sing | 1.37Å | 1.38Å | Aromatic |
| C5 | C4 | doub | 1.40Å | 1.39Å | Aromatic |
| C4 | N3 | sing | 1.33Å | 1.36Å | Aromatic |
| N3 | C2 | doub | 1.32Å | 1.35Å | Aromatic |
| N1 | C2 | sing | 1.32Å | 1.35Å | Aromatic |
| C2 | H2 | sing | 1.08Å | 1.08Å | |
| C6 | N1 | doub | 1.33Å | 1.37Å | Aromatic |
| C5 | C6 | sing | 1.41Å | 1.43Å | Aromatic |
| N6 | C6 | sing | 1.38Å | 1.35Å | |
| N6 | HN6 | sing | 0.97Å | 1.00Å | |
| N6 | HN6A | sing | 0.97Å | 1.00Å | |
| N7 | C5 | sing | 1.36Å | 1.39Å | Aromatic |
| C8 | N7 | doub | 1.30Å | 1.31Å | Aromatic |
| C9 | C8 | sing | 1.51Å | 1.50Å | |
| O2' | C2' | sing | 1.43Å | 1.41Å | |
| C2' | C3' | sing | 1.54Å | 1.51Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| O3' | C3' | sing | 1.43Å | 1.42Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C9 | H9 | sing | 1.09Å | 1.10Å | |
| C9 | H9A | sing | 1.09Å | 1.10Å | |
| C9 | H9B | sing | 1.09Å | 1.10Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N2 | CG | HG | 109.5° | 109.5° |
| N2 | CG | HGA | 109.4° | 109.5° |
| N2 | CG | HGB | 109.5° | 109.5° |
| CG | N2 | CE | 108.6° | 111.0° |
| CG | N2 | C5' | 109.1° | 111.0° |
| HG | CG | HGA | 109.5° | 109.5° |
| HG | CG | HGB | 109.5° | 109.5° |
| HGA | CG | HGB | 109.5° | 109.4° |
| CE | N2 | C5' | 110.3° | 111.0° |
| N2 | CE | HE | 109.5° | 109.4° |
| N2 | CE | HEA | 109.4° | 109.4° |
| N2 | CE | HEB | 109.5° | 109.5° |
| N2 | C5' | C4' | 113.3° | 109.5° |
| N2 | C5' | H5' | 108.2° | 109.5° |
| N2 | C5' | H5'A | 107.3° | 109.4° |
| HE | CE | HEA | 109.5° | 109.5° |
| HE | CE | HEB | 109.5° | 109.5° |
| HEA | CE | HEB | 109.5° | 109.5° |
| C4' | C5' | H5' | 108.2° | 109.5° |
| C4' | C5' | H5'A | 107.4° | 109.5° |
| C5' | C4' | O4' | 107.7° | 110.4° |
| C5' | C4' | C3' | 112.7° | 110.4° |
| C5' | C4' | H4' | 107.4° | 110.3° |
| H5' | C5' | H5'A | 112.5° | 109.5° |
| O4' | C4' | C3' | 105.9° | 104.8° |
| O4' | C4' | H4' | 114.1° | 110.4° |
| C4' | O4' | C1' | 109.2° | 105.3° |
| C3' | C4' | H4' | 109.2° | 110.4° |
| C4' | C3' | C2' | 102.4° | 104.1° |
| C4' | C3' | O3' | 108.7° | 110.5° |
| C4' | C3' | H3' | 114.4° | 110.5° |
| O4' | C1' | N9 | 107.1° | 110.4° |
| O4' | C1' | C2' | 105.0° | 104.8° |
| O4' | C1' | H1' | 115.4° | 110.4° |
| N9 | C1' | C2' | 113.8° | 110.4° |
| N9 | C1' | H1' | 106.9° | 110.4° |
| C1' | N9 | C8 | 128.5° | 126.3° |
| C1' | N9 | C4 | 125.7° | 126.3° |
| C2' | C1' | H1' | 108.9° | 110.4° |
| C1' | C2' | O2' | 112.6° | 110.5° |
| C1' | C2' | C3' | 101.6° | 104.0° |
| C1' | C2' | H2' | 115.3° | 110.5° |
| C8 | N9 | C4 | 105.8° | 107.4° |
| N9 | C8 | N7 | 113.7° | 110.0° |
| N9 | C8 | C9 | 120.3° | 125.0° |
| N9 | C4 | C5 | 105.5° | 106.0° |
| N9 | C4 | N3 | 127.7° | 134.9° |
| C5 | C4 | N3 | 126.7° | 119.1° |
| C4 | C5 | C6 | 116.6° | 118.2° |
| C4 | C5 | N7 | 110.6° | 107.1° |
| C4 | N3 | C2 | 111.6° | 120.6° |
| N3 | C2 | N1 | 128.3° | 122.5° |
| N3 | C2 | H2 | 115.8° | 118.7° |
| N1 | C2 | H2 | 115.8° | 118.8° |
| C2 | N1 | C6 | 118.6° | 121.2° |
| N1 | C6 | C5 | 118.1° | 118.4° |
| N1 | C6 | N6 | 118.5° | 120.8° |
| C5 | C6 | N6 | 123.4° | 120.8° |
| C6 | C5 | N7 | 132.8° | 134.7° |
| C6 | N6 | HN6 | 109.5° | 120.0° |
| C6 | N6 | HN6A | 109.5° | 120.0° |
| HN6 | N6 | HN6A | 109.5° | 120.0° |
| C5 | N7 | C8 | 104.4° | 109.4° |
| N7 | C8 | C9 | 126.0° | 125.0° |
| C8 | C9 | H9 | 109.5° | 109.5° |
| C8 | C9 | H9A | 109.5° | 109.5° |
| C8 | C9 | H9B | 109.5° | 109.5° |
| O2' | C2' | C3' | 116.2° | 110.6° |
| O2' | C2' | H2' | 100.3° | 110.6° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| C3' | C2' | H2' | 111.6° | 110.5° |
| C2' | C3' | O3' | 109.6° | 110.5° |
| C2' | C3' | H3' | 113.7° | 110.5° |
| O3' | C3' | H3' | 107.9° | 110.5° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| H9 | C9 | H9A | 109.5° | 109.4° |
| H9 | C9 | H9B | 109.4° | 109.5° |
| H9A | C9 | H9B | 109.5° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N2 | CG | HG | HGA | 120.0° | 120.0° |
| N2 | CG | HG | HGB | 120.0° | 120.0° |
| N2 | CG | HGA | HGB | 120.0° | 120.0° |
| CG | N2 | CE | C5' | 119.6° | 124.0° |
| CG | N2 | CE | HE | 153.1° | 60.0° |
| CG | N2 | CE | HEA | 86.9° | 180.0° |
| CG | N2 | CE | HEB | 33.1° | 60.0° |
| CG | N2 | C5' | C4' | 179.7° | 170.0° |
| CG | N2 | C5' | H5' | 59.7° | 70.0° |
| CG | N2 | C5' | H5'A | 61.9° | 50.0° |
| HG | CG | HGA | HGB | 120.0° | 120.0° |
| HG | CG | N2 | CE | 101.3° | 64.0° |
| HG | CG | N2 | C5' | 19.0° | 60.0° |
| HGA | CG | N2 | CE | 138.7° | 56.1° |
| HGA | CG | N2 | C5' | 101.0° | 180.0° |
| HGB | CG | N2 | CE | 18.7° | 176.0° |
| HGB | CG | N2 | C5' | 139.0° | 60.0° |
| N2 | CE | HE | HEA | 120.0° | 119.9° |
| N2 | CE | HE | HEB | 120.0° | 120.0° |
| N2 | CE | HEA | HEB | 120.0° | 120.0° |
| CE | N2 | C5' | C4' | 61.0° | 66.1° |
| CE | N2 | C5' | H5' | 179.0° | 54.0° |
| CE | N2 | C5' | H5'A | 57.4° | 174.0° |
| C5' | N2 | CE | HE | 87.3° | 63.9° |
| C5' | N2 | CE | HEA | 32.7° | 56.0° |
| C5' | N2 | CE | HEB | 152.7° | 176.0° |
| N2 | C5' | C4' | H5' | 120.0° | 120.0° |
| N2 | C5' | C4' | H5'A | 118.3° | 120.0° |
| N2 | C5' | H5' | H5'A | 118.4° | 120.0° |
| N2 | C5' | C4' | O4' | 38.8° | 69.6° |
| N2 | C5' | C4' | C3' | 155.1° | 175.0° |
| N2 | C5' | C4' | H4' | 84.5° | 52.7° |
| HE | CE | HEA | HEB | 120.0° | 120.1° |
| C4' | C5' | H5' | H5'A | 118.5° | 120.0° |
| C5' | C4' | O4' | C3' | 120.8° | 118.8° |
| C5' | C4' | O4' | H4' | 119.1° | 122.2° |
| C5' | C4' | C3' | H4' | 119.3° | 122.3° |
| C5' | C4' | O4' | C1' | 119.2° | 159.4° |
| C5' | C4' | C3' | C2' | 92.2° | 142.8° |
| C5' | C4' | C3' | O3' | 151.9° | 98.5° |
| C5' | C4' | C3' | H3' | 31.3° | 24.1° |
| H5' | C5' | C4' | O4' | 81.2° | 50.4° |
| H5' | C5' | C4' | C3' | 35.2° | 64.9° |
| H5' | C5' | C4' | H4' | 155.5° | 172.7° |
| H5'A | C5' | C4' | O4' | 157.1° | 170.4° |
| H5'A | C5' | C4' | C3' | 86.5° | 55.1° |
| H5'A | C5' | C4' | H4' | 33.8° | 67.3° |
| O4' | C4' | C3' | H4' | 123.2° | 118.9° |
| C4' | O4' | C1' | N9 | 144.0° | 159.3° |
| C4' | O4' | C1' | C2' | 22.7° | 40.5° |
| C4' | O4' | C1' | H1' | 97.2° | 78.3° |
| O4' | C4' | C3' | C2' | 25.2° | 24.0° |
| O4' | C4' | C3' | O3' | 90.6° | 142.6° |
| O4' | C4' | C3' | H3' | 148.7° | 94.7° |
| C3' | C4' | O4' | C1' | 1.6° | 40.5° |
| C4' | C3' | C2' | C1' | 37.8° | 0.0° |
| C4' | C3' | C2' | O2' | 160.3° | 118.6° |
| C4' | C3' | C2' | O3' | 115.3° | 118.7° |
| C4' | C3' | C2' | H3' | 124.0° | 118.7° |
| C4' | C3' | C2' | H2' | 85.5° | 118.6° |
| C4' | C3' | O3' | H3' | 124.6° | 122.6° |
| C4' | C3' | O3' | HO3' | 54.1° | 179.9° |
| H4' | C4' | O4' | C1' | 121.7° | 78.4° |
| H4' | C4' | C3' | C2' | 148.5° | 94.9° |
| H4' | C4' | C3' | O3' | 32.6° | 23.7° |
| H4' | C4' | C3' | H3' | 88.0° | 146.4° |
| O4' | C1' | N9 | C2' | 115.5° | 115.4° |
| O4' | C1' | N9 | H1' | 124.2° | 122.3° |
| O4' | C1' | C2' | H1' | 124.2° | 118.8° |
| O4' | C1' | N9 | C8 | 140.7° | 43.2° |
| O4' | C1' | N9 | C4 | 39.7° | 136.5° |
| O4' | C1' | C2' | O2' | 162.9° | 142.6° |
| O4' | C1' | C2' | C3' | 37.9° | 24.0° |
| O4' | C1' | C2' | H2' | 82.8° | 94.6° |
| N9 | C1' | C2' | H1' | 119.1° | 122.3° |
| C1' | N9 | C8 | C4 | 179.6° | 179.7° |
| C1' | N9 | C4 | C5 | 179.7° | 179.9° |
| C1' | N9 | C4 | N3 | 0.2° | 0.0° |
| C1' | N9 | C8 | N7 | 179.8° | 179.9° |
| C1' | N9 | C8 | C9 | 0.2° | 0.0° |
| N9 | C1' | C2' | O2' | 80.4° | 98.5° |
| N9 | C1' | C2' | C3' | 154.7° | 142.8° |
| N9 | C1' | C2' | H2' | 33.9° | 24.2° |
| C2' | C1' | N9 | C8 | 103.8° | 72.2° |
| C2' | C1' | N9 | C4 | 75.8° | 108.2° |
| C1' | C2' | O2' | C3' | 116.5° | 114.6° |
| C1' | C2' | O2' | H2' | 123.1° | 122.7° |
| C1' | C2' | C3' | H2' | 123.3° | 118.6° |
| C1' | C2' | O2' | HO2' | 150.0° | 180.0° |
| C1' | C2' | C3' | O3' | 77.5° | 118.7° |
| C1' | C2' | C3' | H3' | 161.7° | 118.6° |
| H1' | C1' | N9 | C8 | 16.5° | 165.5° |
| H1' | C1' | N9 | C4 | 163.9° | 14.1° |
| H1' | C1' | C2' | O2' | 38.7° | 23.8° |
| H1' | C1' | C2' | C3' | 86.2° | 94.9° |
| H1' | C1' | C2' | H2' | 153.0° | 146.5° |
| C8 | N9 | C4 | C5 | 0.1° | 0.2° |
| C8 | N9 | C4 | N3 | 179.8° | 179.7° |
| N9 | C8 | N7 | C5 | 0.1° | 0.4° |
| N9 | C8 | N7 | C9 | 180.0° | 179.8° |
| N9 | C8 | C9 | H9 | 136.9° | 90.0° |
| N9 | C8 | C9 | H9A | 103.1° | 150.0° |
| N9 | C8 | C9 | H9B | 16.9° | 30.0° |
| N9 | C4 | C5 | N3 | 179.9° | 180.0° |
| N9 | C4 | N3 | C2 | 179.9° | 180.0° |
| N9 | C4 | C5 | C6 | 179.9° | 180.0° |
| N9 | C4 | C5 | N7 | 0.0° | 0.0° |
| C4 | N9 | C8 | N7 | 0.1° | 0.4° |
| C4 | N9 | C8 | C9 | 179.9° | 179.8° |
| C5 | C4 | N3 | C2 | 0.0° | 0.0° |
| C4 | C5 | C6 | N1 | 0.1° | 0.0° |
| C4 | C5 | C6 | N7 | 179.8° | 180.0° |
| C4 | C5 | C6 | N6 | 179.9° | 180.0° |
| C4 | C5 | N7 | C8 | 0.1° | 0.2° |
| C4 | N3 | C2 | N1 | 0.0° | 0.0° |
| C4 | N3 | C2 | H2 | 180.0° | 180.0° |
| N3 | C4 | C5 | C6 | 0.1° | 0.1° |
| N3 | C4 | C5 | N7 | 179.9° | 179.9° |
| N3 | C2 | N1 | H2 | 180.0° | 179.9° |
| N3 | C2 | N1 | C6 | 0.1° | 0.0° |
| C2 | N1 | C6 | C5 | 0.1° | 0.0° |
| C2 | N1 | C6 | N6 | 179.9° | 180.0° |
| H2 | C2 | N1 | C6 | 179.9° | 180.0° |
| N1 | C6 | C5 | N6 | 180.0° | 180.0° |
| N1 | C6 | N6 | HN6 | 19.6° | 0.0° |
| N1 | C6 | N6 | HN6A | 139.6° | 180.0° |
| N1 | C6 | C5 | N7 | 179.9° | 180.0° |
| C5 | C6 | N6 | HN6 | 160.4° | 180.0° |
| C5 | C6 | N6 | HN6A | 40.4° | 0.0° |
| C6 | C5 | N7 | C8 | 179.8° | 179.8° |
| C6 | N6 | HN6 | HN6A | 120.0° | 179.9° |
| N6 | C6 | C5 | N7 | 0.1° | 0.0° |
| C5 | N7 | C8 | C9 | 179.9° | 179.8° |
| N7 | C8 | C9 | H9 | 43.1° | 89.8° |
| N7 | C8 | C9 | H9A | 76.9° | 30.2° |
| N7 | C8 | C9 | H9B | 163.1° | 150.1° |
| C8 | C9 | H9 | H9A | 120.0° | 120.0° |
| C8 | C9 | H9 | H9B | 120.0° | 120.1° |
| C8 | C9 | H9A | H9B | 120.0° | 120.0° |
| O2' | C2' | C3' | H2' | 114.2° | 122.8° |
| O2' | C2' | C3' | O3' | 45.0° | 0.0° |
| O2' | C2' | C3' | H3' | 75.8° | 122.7° |
| C3' | C2' | O2' | HO2' | 93.5° | 65.3° |
| C2' | C3' | O3' | H3' | 124.2° | 122.7° |
| C2' | C3' | O3' | HO3' | 57.0° | 65.4° |
| H2' | C2' | O2' | HO2' | 26.9° | 57.4° |
| H2' | C2' | C3' | O3' | 159.2° | 122.7° |
| H2' | C2' | C3' | H3' | 38.4° | 0.1° |
| H3' | C3' | O3' | HO3' | 178.7° | 57.3° |
| H9 | C9 | H9A | H9B | 120.0° | 119.9° |
