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SummaryGeometryRelated PDB entries

N8A

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CAQCAPsing1.53Å1.56Å
CAQCARsing1.51Å1.55Å
CAPNANsing1.46Å1.44Å
OAOCAMdoub1.22Å1.19Å
CARNAWdoub1.32Å1.32ÅAromatic
CARCASsing1.38Å1.39ÅAromatic
NAWCAVsing1.32Å1.33ÅAromatic
NANCAMsing1.35Å1.44Å
CAMNALsing1.35Å1.43Å
CASCATdoub1.39Å1.39ÅAromatic
CAVCAUdoub1.38Å1.39ÅAromatic
OAKCABsing1.36Å1.40Å
CATCAUsing1.39Å1.39ÅAromatic
NALCACsing1.40Å1.44Å
CABCACdoub1.39Å1.39ÅAromatic
CABCAAsing1.39Å1.38ÅAromatic
CACCADsing1.39Å1.36ÅAromatic
CAACAFdoub1.38Å1.37ÅAromatic
CADCAEdoub1.38Å1.36ÅAromatic
CAFCAEsing1.38Å1.38ÅAromatic
NAJSAGsing1.66Å1.68Å
CAESAGsing1.76Å1.79Å
OAHSAGdoub1.42Å1.61Å
SAGOAIdoub1.42Å1.60Å
CASH1sing1.08Å1.08Å
CATH2sing1.08Å1.08Å
CAUH3sing1.08Å1.08Å
CAVH4sing1.08Å1.08Å
CAQH5sing1.09Å1.10Å
CAQH6sing1.09Å1.10Å
CAPH7sing1.09Å1.10Å
CAPH8sing1.09Å1.10Å
NANH9sing0.97Å1.00Å
NALH10sing0.97Å1.00Å
CADH11sing1.08Å1.08Å
OAKH12sing0.97Å0.95Å
CAAH13sing1.08Å1.08Å
CAFH14sing1.08Å1.08Å
NAJH15sing0.97Å1.00Å
NAJH16sing0.97Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CAPCAQCAR119.1°109.5°
CAQCAPNAN106.7°109.5°
CAPCAQH5107.0°109.5°
CAPCAQH6107.0°109.5°
CAQCAPH7110.2°109.4°
CAQCAPH8110.2°109.5°
CAQCARNAW120.0°119.6°
CAQCARCAS121.3°119.6°
CARCAQH5107.0°109.5°
CARCAQH6107.0°109.5°
CAPNANCAM119.2°120.0°
NANCAPH7110.2°109.5°
NANCAPH8110.1°109.5°
CAPNANH9120.4°119.9°
OAOCAMNAN121.8°120.0°
OAOCAMNAL121.8°120.0°
NAWCARCAS118.7°120.7°
CARNAWCAV121.1°121.7°
CARCASCAT122.1°119.1°
CARCASH1118.9°120.4°
NAWCAVCAU122.6°120.8°
NAWCAVH4118.7°119.6°
NANCAMNAL116.4°120.0°
CAMNANH9120.4°120.0°
CAMNALCAC118.0°120.0°
CAMNALH10121.0°120.0°
CASCATCAU117.2°118.4°
CATCASH1118.9°120.5°
CASCATH2121.4°120.7°
CAVCAUCAT118.3°119.2°
CAVCAUH3120.8°120.4°
CAUCAVH4118.7°119.6°
OAKCABCAC121.6°120.1°
OAKCABCAA117.7°120.1°
CABOAKH12109.5°114.0°
CAUCATH2121.4°120.8°
CATCAUH3120.8°120.4°
NALCACCAB120.9°120.1°
NALCACCAD118.9°120.1°
CACNALH10121.0°119.9°
CACCABCAA120.7°119.8°
CABCACCAD120.2°119.8°
CABCAACAF118.6°120.1°
CABCAAH13120.7°120.0°
CACCADCAE118.8°120.0°
CACCADH11120.6°120.1°
CAACAFCAE119.6°120.2°
CAFCAAH13120.7°119.9°
CAACAFH14120.2°120.0°
CADCAECAF121.9°120.1°
CADCAESAG119.9°119.9°
CAECADH11120.6°120.0°
CAFCAESAG118.2°119.9°
CAECAFH14120.2°119.9°
NAJSAGCAE108.9°107.2°
NAJSAGOAH107.8°106.4°
NAJSAGOAI113.1°106.4°
SAGNAJH15109.5°120.0°
SAGNAJH16109.5°120.0°
CAESAGOAH106.0°106.4°
CAESAGOAI108.0°106.4°
OAHSAGOAI112.7°123.1°
H5CAQH6109.5°109.4°
H7CAPH8109.5°109.4°
H15NAJH16109.5°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CAPCAQCARH5121.4°120.0°
CAPCAQCARH6121.4°120.1°
CAQCAPNANH7119.6°120.0°
CAQCAPNANH8119.6°120.1°
CAPCAQCARNAW100.3°55.0°
CAPCAQCARCAS81.3°124.5°
CAQCAPNANCAM68.8°180.0°
CAPCAQH5H6115.7°120.0°
CAQCAPH7H8121.3°119.9°
CAQCAPNANH9111.2°0.1°
CARCAQCAPNAN33.3°180.0°
CAQCARNAWCAS178.4°179.5°
CAQCARNAWCAV179.6°180.0°
CAQCARCASCAT179.8°180.0°
CAQCARCASH10.2°0.3°
CARCAQH5H6115.6°120.0°
CARCAQCAPH7152.9°60.0°
CARCAQCAPH886.2°59.9°
CAPNANCAMOAO3.1°0.0°
CAPNANCAMH9180.0°179.9°
CAPNANCAMNAL176.5°180.0°
NANCAPCAQH5154.7°60.0°
NANCAPCAQH688.0°59.9°
NANCAPH7H8121.3°120.0°
OAOCAMNANNAL179.7°180.0°
OAOCAMNALCAC0.9°4.5°
OAOCAMNANH9176.8°179.9°
OAOCAMNALH10179.1°175.5°
NAWCARCASCAT1.8°0.5°
CARNAWCAVCAU0.4°0.3°
NAWCARCASH1178.2°179.7°
CARNAWCAVH4179.6°179.7°
NAWCARCAQH521.0°65.0°
NAWCARCAQH6138.3°175.1°
CASCARNAWCAV1.2°0.6°
CARCASCATH1180.0°179.7°
CARCASCATCAU1.6°0.2°
CARCASCATH2178.4°179.8°
CASCARCAQH5157.4°115.5°
CASCARCAQH640.1°4.4°
NAWCAVCAUH4180.0°179.9°
NAWCAVCAUCAT0.2°0.1°
NAWCAVCAUH3179.8°179.9°
NANCAMNALCAC178.8°175.5°
CAMNANCAPH750.7°60.0°
CAMNANCAPH8171.6°59.9°
NANCAMNALH101.2°4.5°
CAMNALCACH10180.0°180.0°
CAMNALCACCAB56.9°145.6°
CAMNALCACCAD125.2°34.6°
NALCAMNANH93.5°0.1°
CASCATCAUCAV0.8°0.0°
CASCATCAUH2180.0°179.9°
CASCATCAUH3179.2°180.0°
CAVCAUCATH3180.0°180.0°
CAVCAUCATH2179.2°180.0°
OAKCABCACNAL0.3°0.0°
OAKCABCACCAA179.8°180.0°
OAKCABCACCAD178.2°179.8°
OAKCABCAACAF177.9°180.0°
OAKCABCAAH132.1°0.0°
CAUCATCASH1178.4°180.0°
CATCAUCAVH4179.8°180.0°
NALCACCABCAD177.8°179.8°
NALCACCABCAA179.8°180.0°
NALCACCADCAE179.7°180.0°
NALCACCADH110.3°0.0°
CACCABCAACAF2.3°0.0°
CABCACCADCAE1.8°0.3°
CABCACNALH10123.1°34.4°
CABCACCADH11178.2°179.8°
CACCABOAKH1244.3°90.0°
CACCABCAAH13177.7°180.0°
CAACABCACCAD2.0°0.2°
CABCAACAFH13180.0°180.0°
CABCAACAFCAE2.4°0.2°
CAACABOAKH12135.5°90.0°
CABCAACAFH14177.6°179.9°
CACCADCAEH11180.0°180.0°
CACCADCAECAF2.0°0.0°
CACCADCAESAG179.6°180.0°
CADCACNALH1054.8°145.4°
CAACAFCAECAD2.3°0.2°
CAACAFCAEH14180.0°179.8°
CAACAFCAESAG179.2°179.7°
CADCAECAFSAG178.4°180.0°
CADCAESAGNAJ45.3°90.0°
CADCAESAGOAH161.0°156.4°
CADCAESAGOAI77.9°23.6°
CADCAECAFH14177.7°180.0°
CAFCAESAGNAJ136.3°90.0°
CAFCAESAGOAH20.5°23.6°
CAFCAESAGOAI100.5°156.5°
CAFCAECADH11178.0°180.0°
CAECAFCAAH13177.6°179.7°
NAJSAGCAEOAH115.8°113.6°
NAJSAGCAEOAI123.2°113.5°
NAJSAGOAHOAI125.6°122.9°
SAGNAJH15H16120.0°179.9°
CAESAGOAHOAI117.9°123.0°
SAGCAECADH110.4°0.0°
SAGCAECAFH140.8°0.1°
CAESAGNAJH15180.0°150.0°
CAESAGNAJH1660.0°29.9°
OAHSAGNAJH1565.4°36.4°
OAHSAGNAJH1654.6°143.5°
OAISAGNAJH1559.9°96.5°
OAISAGNAJH16180.0°83.6°
H1CASCATH21.6°0.1°
H2CATCAUH30.8°0.1°
H3CAUCAVH40.2°0.0°
H5CAQCAPH785.7°180.0°
H5CAQCAPH835.1°60.1°
H6CAQCAPH731.6°60.1°
H6CAQCAPH8152.4°179.9°
H7CAPNANH9129.3°120.0°
H8CAPNANH98.4°120.0°
H13CAACAFH142.4°0.1°

250359

PDB entries from 2026-03-11

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