Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

N87

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2O1doub1.21Å1.23Å
C4C2sing1.51Å1.51Å
C2O3sing1.34Å1.25Å
O3HO3sing0.97Å0.95Å
C12C4sing1.53Å1.52Å
C6C4sing1.50Å1.51Å
O5C4sing1.43Å1.43Å
O5HO5sing0.97Å0.95Å
C7C6doub1.31Å1.33Å
C6H6sing1.08Å1.08Å
C8C7sing1.50Å1.50Å
C13C7sing1.48Å1.49Å
O9C8sing1.43Å1.43Å
C8C10sing1.53Å1.51Å
C8H8sing1.09Å1.10Å
O9HO9sing0.97Å0.95Å
O11C10sing1.43Å1.42Å
C10C12sing1.53Å1.53Å
C10H10sing1.09Å1.10Å
O11HO11sing0.97Å0.95Å
C12H12sing1.09Å1.10Å
C12H12Asing1.09Å1.10Å
C14C13doub1.39Å1.40ÅAromatic
C13C25sing1.40Å1.40ÅAromatic
C15C14sing1.39Å1.39ÅAromatic
C14H14sing1.08Å1.08Å
C16C15sing1.48Å1.50Å
C15C23doub1.40Å1.38ÅAromatic
O26C16doub1.22Å1.21Å
C16C17sing1.48Å1.49Å
C18C17doub1.40Å1.40ÅAromatic
C17C22sing1.40Å1.40ÅAromatic
C18C19sing1.38Å1.40ÅAromatic
C18H18sing1.08Å1.08Å
C19C20doub1.38Å1.40ÅAromatic
C19H19sing1.08Å1.08Å
C20C21sing1.38Å1.41ÅAromatic
C20H20sing1.08Å1.08Å
C22C21doub1.38Å1.39ÅAromatic
C21H21sing1.08Å1.08Å
C22H22sing1.08Å1.08Å
C23C24sing1.38Å1.40ÅAromatic
C23H23sing1.08Å1.08Å
C24C25doub1.38Å1.40ÅAromatic
C24H24sing1.08Å1.08Å
C25H25sing1.08Å1.08Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O1C2C4122.0°120.0°
O1C2O3120.2°120.0°
C4C2O3117.8°120.0°
C2C4C12118.2°109.4°
C2C4C6104.3°109.3°
C2C4O5109.9°109.4°
C2O3HO3109.5°117.0°
C12C4C6108.6°110.1°
C12C4O5106.9°109.4°
C4C12C10107.2°108.5°
C4C12H12110.3°109.4°
C4C12H12A110.2°109.7°
C6C4O5108.7°109.3°
C4C6C7123.5°123.8°
C4C6H6118.2°118.1°
C4O5HO5109.5°114.0°
C7C6H6118.2°118.1°
C6C7C8122.5°123.9°
C6C7C13114.8°118.0°
C8C7C13122.6°118.1°
C7C8O9109.1°109.4°
C7C8C10112.6°110.1°
C7C8H8107.2°109.4°
C7C13C14118.5°120.1°
C7C13C25121.2°120.1°
O9C8C10108.2°109.3°
O9C8H8111.7°109.3°
C8O9HO9109.5°114.0°
C10C8H8108.1°109.3°
C8C10O11107.9°109.6°
C8C10C12112.8°108.4°
C8C10H10109.0°109.6°
O11C10C12111.5°109.7°
O11C10H10110.4°109.8°
C10O11HO11109.5°114.0°
C12C10H10105.2°109.7°
C10C12H12110.2°109.7°
C10C12H12A110.2°109.6°
H12C12H12A108.7°109.8°
C14C13C25120.2°119.8°
C13C14C15121.0°119.7°
C13C14H14119.5°120.1°
C13C25C24117.8°120.2°
C13C25H25121.1°119.9°
C15C14H14119.5°120.1°
C14C15C16116.5°120.1°
C14C15C23119.9°119.8°
C16C15C23123.6°120.1°
C15C16O26118.5°120.0°
C15C16C17123.1°120.0°
C15C23C24119.3°120.1°
C15C23H23120.4°120.0°
O26C16C17118.2°120.0°
C16C17C18118.9°120.2°
C16C17C22120.7°120.1°
C18C17C22120.3°119.7°
C17C18C19120.4°119.9°
C17C18H18119.8°120.1°
C17C22C21120.6°119.8°
C17C22H22119.6°120.1°
C19C18H18119.8°120.1°
C18C19C20118.2°120.1°
C18C19H19120.9°119.9°
C20C19H19120.9°119.9°
C19C20C21122.3°120.4°
C19C20H20118.8°119.8°
C21C20H20118.9°119.8°
C20C21C22118.1°120.1°
C20C21H21120.9°119.9°
C22C21H21120.9°119.9°
C21C22H22119.7°120.1°
C24C23H23120.4°119.9°
C23C24C25121.8°120.3°
C23C24H24119.1°119.9°
C25C24H24119.1°119.8°
C24C25H25121.1°119.9°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O1C2C4O3178.4°179.7°
O1C2O3HO30.0°0.1°
O1C2C4C1222.6°25.2°
O1C2C4C698.1°95.3°
O1C2C4O5145.6°145.0°
C4C2O3HO3178.5°179.7°
C2C4C12C6118.5°120.1°
C2C4C12O5124.5°119.7°
C2C4C6O5117.2°119.7°
C2C4O5HO5180.0°59.9°
C2C4C6C7156.2°137.3°
C2C4C6H623.8°42.5°
C2C4C12C10175.2°170.0°
C2C4C12H1264.8°70.4°
C2C4C12H12A55.3°50.2°
O3C2C4C12159.0°154.4°
O3C2C4C680.4°85.0°
O3C2C4O536.0°34.7°
C12C4C6O5115.9°120.2°
C12C4O5HO550.6°179.7°
C12C4C6C729.3°17.2°
C12C4C6H6150.7°162.7°
C4C12C10C863.6°68.1°
C4C12C10O11174.7°172.3°
C4C12C10H12120.0°119.5°
C4C12C10H12A120.0°119.8°
C4C12C10H1055.0°51.6°
C4C12H12H12A121.0°120.5°
C6C4O5HO566.4°59.7°
C4C6C7H6180.0°179.9°
C4C6C7C82.8°0.4°
C4C6C7C13179.8°179.6°
C6C4C12C1056.8°49.8°
C6C4C12H12176.8°169.5°
C6C4C12H12A63.2°69.9°
O5C4C6C786.6°103.0°
O5C4C6H693.4°77.1°
O5C4C12C1060.3°70.3°
O5C4C12H1259.7°49.4°
O5C4C12H12A179.7°169.9°
C6C7C8C13176.7°180.0°
C6C7C8O9126.3°137.3°
C6C7C8C106.1°17.2°
C6C7C8H8112.7°103.0°
C6C7C13C14127.5°64.8°
C6C7C13C2548.9°115.0°
H6C6C7C8177.2°179.5°
H6C6C7C130.3°0.5°
C7C8O9C10122.9°120.7°
C7C8O9H8118.3°119.7°
C7C8C10H8118.2°120.2°
C7C8O9HO9180.0°60.0°
C7C8C10O11160.5°169.4°
C7C8C10C1236.9°49.7°
C7C8C10H1079.6°70.0°
C8C7C13C1449.5°115.2°
C8C7C13C25134.1°65.0°
C13C7C8O957.0°42.6°
C13C7C8C10177.2°162.8°
C13C7C8H864.1°77.0°
C7C13C14C25176.5°179.8°
C7C13C14C15177.6°179.9°
C7C13C14H142.4°0.0°
C7C13C25C24177.9°179.7°
C7C13C25H252.1°0.0°
O9C8C10H8121.1°119.6°
O9C8C10O1178.8°70.4°
O9C8C10C12157.6°169.9°
O9C8C10H1041.1°50.2°
C10C8O9HO957.1°179.3°
C8C10O11C12124.4°118.9°
C8C10O11H10119.0°120.5°
C8C10C12H10118.7°119.7°
C8C10O11HO11180.0°60.0°
C8C10C12H12176.3°172.4°
C8C10C12H12A56.4°51.8°
H8C8O9HO961.7°59.7°
H8C8C10O1142.3°49.2°
H8C8C10C1281.3°70.5°
H8C8C10H10162.2°169.8°
O11C10C12H10119.7°120.7°
O11C10C12H1254.7°52.8°
O11C10C12H12A65.3°67.9°
C12C10O11HO1155.6°178.9°
C10C12H12H12A120.9°120.6°
H10C10O11HO1161.0°60.5°
H10C10C12H1265.0°67.9°
H10C10C12H12A175.0°171.4°
C13C14C15H14180.0°179.9°
C13C14C15C16179.5°180.0°
C13C14C15C230.6°0.0°
C14C13C25C241.5°0.6°
C14C13C25H25178.5°179.7°
C25C13C14C151.1°0.3°
C25C13C14H14178.9°179.8°
C13C25C24C231.4°0.6°
C13C25C24H25180.0°179.7°
C13C25C24H24178.6°179.7°
C14C15C16C23178.9°179.9°
C14C15C16O2635.5°7.5°
C14C15C16C17139.8°172.5°
C14C15C23C240.4°0.1°
C14C15C23H23179.5°180.0°
H14C14C15C160.5°0.1°
H14C14C15C23179.4°180.0°
C15C16O26C17175.6°180.0°
C15C16C17C18176.4°34.2°
C15C16C17C225.1°146.1°
C16C15C23C24179.3°180.0°
C16C15C23H230.7°0.1°
C23C15C16O26145.6°172.4°
C23C15C16C1739.1°7.6°
C15C23C24H23180.0°179.9°
C15C23C24C250.9°0.3°
C15C23C24H24179.1°180.0°
O26C16C17C188.3°145.8°
O26C16C17C22170.2°33.9°
C16C17C18C22178.5°179.7°
C16C17C18C19178.9°180.0°
C16C17C18H181.1°0.0°
C16C17C22C21178.8°179.8°
C16C17C22H221.2°0.0°
C17C18C19H18180.0°180.0°
C17C18C19C200.2°0.0°
C17C18C19H19179.8°180.0°
C18C17C22C210.3°0.5°
C18C17C22H22179.7°179.7°
C22C17C18C190.3°0.2°
C22C17C18H18179.7°179.7°
C17C22C21C200.2°0.4°
C17C22C21H22180.0°179.8°
C17C22C21H21179.8°179.7°
C18C19C20H19180.0°179.9°
C18C19C20C210.1°0.1°
C18C19C20H20179.9°180.0°
H18C18C19C20179.8°180.0°
H18C18C19H190.2°0.1°
C19C20C21H20180.0°179.9°
C19C20C21C220.1°0.2°
C19C20C21H21179.9°180.0°
H19C19C20C21179.9°180.0°
H19C19C20H200.1°0.0°
C20C21C22H21180.0°179.9°
C20C21C22H22179.8°179.8°
H20C20C21C22179.9°179.8°
H20C20C21H210.1°0.1°
H21C21C22H220.2°0.1°
C23C24C25H24180.0°179.7°
C23C24C25H25178.6°179.7°
H23C23C24C25179.1°179.8°
H23C23C24H240.9°0.0°
H24C24C25H251.4°0.0°

223532

PDB entries from 2024-08-07

PDB statisticsPDBj update infoContact PDBjnumon