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Summary Geometry Related PDB entries

N6M

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N9	C8	sing	1.36Å	1.34Å	Aromatic
N9	C4	sing	1.37Å	1.33Å	Aromatic
C8	N7	doub	1.30Å	1.33Å	Aromatic
N7	C5	sing	1.35Å	1.33Å	Aromatic
C5	C6	sing	1.41Å	1.41Å	Aromatic
C5	C4	doub	1.41Å	1.38Å	Aromatic
C6	N6	sing	1.38Å	1.34Å
C6	N1	doub	1.33Å	1.35Å	Aromatic
N1	C2	sing	1.32Å	1.33Å	Aromatic
C2	N3	doub	1.32Å	1.33Å	Aromatic
N3	C4	sing	1.33Å	1.35Å	Aromatic
N9	H9	sing	0.97Å	1.00Å
C8	H8	sing	1.08Å	1.08Å
N6	H6	sing	0.97Å	1.00Å
N6	C11	sing	1.47Å	1.48Å
C11	H111	sing	1.09Å	1.10Å
C11	H112	sing	1.09Å	1.10Å
C11	H113	sing	1.09Å	1.10Å
C2	H2	sing	1.08Å	1.08Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C8	N9	C4	108.1°	107.5°
N9	C8	N7	108.6°	109.9°
C8	N9	H9	125.9°	126.3°
N9	C8	H8	125.7°	125.0°
N9	C4	C5	108.0°	106.0°
N9	C4	N3	132.7°	134.9°
C4	N9	H9	126.0°	126.3°
C8	N7	C5	109.1°	109.5°
N7	C8	H8	125.7°	125.1°
N7	C5	C6	134.9°	134.7°
N7	C5	C4	106.3°	107.1°
C6	C5	C4	118.8°	118.1°
C5	C6	N6	125.0°	120.7°
C5	C6	N1	118.5°	118.5°
C5	C4	N3	119.3°	119.1°
N6	C6	N1	116.5°	120.8°
C6	N6	H6	104.5°	120.0°
C6	N6	C11	125.3°	120.0°
C6	N1	C2	120.7°	121.2°
N1	C2	N3	122.1°	122.5°
N1	C2	H2	119.0°	118.8°
C2	N3	C4	120.6°	120.6°
N3	C2	H2	119.0°	118.7°
H6	N6	C11	104.5°	120.0°
N6	C11	H111	109.5°	109.5°
N6	C11	H112	109.4°	109.5°
N6	C11	H113	109.5°	109.5°
H111	C11	H112	109.5°	109.5°
H111	C11	H113	109.4°	109.4°
H112	C11	H113	109.5°	109.4°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C8	N9	C4	H9	180.0°	180.0°
N9	C8	N7	H8	180.0°	180.0°
N9	C8	N7	C5	0.3°	0.0°
C8	N9	C4	C5	0.0°	0.0°
C8	N9	C4	N3	179.5°	180.0°
C4	N9	C8	N7	0.2°	0.0°
N9	C4	C5	N7	0.2°	0.0°
N9	C4	C5	C6	179.9°	180.0°
N9	C4	C5	N3	179.6°	180.0°
N9	C4	N3	C2	179.9°	179.7°
C4	N9	C8	H8	179.8°	180.0°
C8	N7	C5	C6	179.8°	180.0°
C8	N7	C5	C4	0.3°	0.0°
N7	C8	N9	H9	179.9°	180.0°
N7	C5	C6	C4	179.9°	180.0°
N7	C5	C6	N6	0.7°	0.1°
N7	C5	C6	N1	179.5°	179.7°
N7	C5	C4	N3	179.8°	180.0°
C5	N7	C8	H8	179.7°	180.0°
C5	C6	N6	N1	178.9°	179.7°
C5	C6	N1	C2	0.7°	0.2°
C6	C5	C4	N3	0.3°	0.0°
C5	C6	N6	H6	125.0°	0.3°
C5	C6	N6	C11	5.0°	179.7°
C4	C5	C6	N6	179.2°	179.9°
C4	C5	C6	N1	0.4°	0.3°
C5	C4	N3	C2	0.6°	0.3°
C5	C4	N9	H9	180.0°	180.0°
N6	C6	N1	C2	179.7°	179.9°
C6	N6	H6	C11	133.1°	179.9°
C6	N6	C11	H111	162.9°	60.1°
C6	N6	C11	H112	42.9°	60.0°
C6	N6	C11	H113	77.2°	180.0°
C6	N1	C2	N3	0.4°	0.1°
N1	C6	N6	H6	56.1°	180.0°
N1	C6	N6	C11	176.1°	0.1°
C6	N1	C2	H2	179.6°	179.7°
N1	C2	N3	H2	180.0°	179.6°
N1	C2	N3	C4	0.3°	0.3°
N3	C4	N9	H9	0.4°	0.1°
C4	N3	C2	H2	179.7°	179.9°
H9	N9	C8	H8	0.2°	0.0°
H6	N6	C11	H111	77.1°	120.0°
H6	N6	C11	H112	162.9°	120.0°
H6	N6	C11	H113	42.8°	0.1°
N6	C11	H111	H112	120.0°	120.1°
N6	C11	H111	H113	120.0°	120.0°
N6	C11	H112	H113	120.0°	120.0°
H111	C11	H112	H113	120.0°	119.9°

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