N65

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C5	C4	sing	1.51Å	1.54Å
C4	C3	sing	1.51Å	1.54Å
C4	NZ	doub	1.28Å	1.35Å
C3	C2	sing	1.53Å	1.53Å
CE	NZ	sing	1.47Å	1.48Å
CE	CD	sing	1.53Å	1.54Å
C1	C2	sing	1.53Å	1.53Å
C	O	doub	1.21Å	1.26Å
C	CA	sing	1.51Å	1.52Å
CG	CD	sing	1.53Å	1.53Å
CG	CB	sing	1.53Å	1.53Å
CA	CB	sing	1.53Å	1.53Å
CA	N	sing	1.47Å	1.46Å
C5	H1	sing	1.09Å	1.10Å
C5	H6	sing	1.09Å	1.10Å
C5	H3	sing	1.09Å	1.10Å
C3	H4	sing	1.09Å	1.10Å
C3	H5	sing	1.09Å	1.10Å
N	H	sing	1.01Å	1.00Å
N	H2	sing	1.01Å	1.00Å
CA	HA	sing	1.09Å	1.10Å
CB	H11	sing	1.09Å	1.10Å
CB	H12	sing	1.09Å	1.10Å
CG	H13	sing	1.09Å	1.10Å
CG	H14	sing	1.09Å	1.10Å
CD	H15	sing	1.09Å	1.10Å
CD	H16	sing	1.09Å	1.10Å
CE	H17	sing	1.09Å	1.10Å
CE	H18	sing	1.09Å	1.10Å
C1	H19	sing	1.09Å	1.10Å
C1	H20	sing	1.09Å	1.10Å
C1	H21	sing	1.09Å	1.10Å
C2	H22	sing	1.09Å	1.10Å
C2	H23	sing	1.09Å	1.10Å
C	OXT	sing	1.34Å	22.41Å
OXT	HXT	sing	0.97Å	0.00Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C5	C4	C3	119.4°	120.0°
C5	C4	NZ	120.6°	120.0°
C4	C5	H1	109.5°	109.5°
C4	C5	H6	109.5°	109.5°
C4	C5	H3	109.5°	109.4°
C3	C4	NZ	120.0°	120.0°
C4	C3	C2	110.0°	109.5°
C4	C3	H4	109.3°	109.5°
C4	C3	H5	109.3°	109.4°
C4	NZ	CE	123.2°	120.0°
C3	C2	C1	108.3°	109.4°
C2	C3	H4	109.4°	109.5°
C2	C3	H5	109.4°	109.4°
C3	C2	H22	109.8°	109.5°
C3	C2	H23	109.8°	109.4°
NZ	CE	CD	110.7°	109.4°
NZ	CE	H17	109.2°	109.4°
NZ	CE	H18	109.1°	109.5°
CE	CD	CG	109.4°	109.4°
CE	CD	H15	109.5°	109.4°
CE	CD	H16	109.5°	109.5°
CD	CE	H17	109.2°	109.5°
CD	CE	H18	109.1°	109.5°
C2	C1	H19	109.5°	109.4°
C2	C1	H20	109.5°	109.5°
C2	C1	H21	109.5°	109.5°
C1	C2	H22	109.8°	109.5°
C1	C2	H23	109.8°	109.5°
O	C	CA	117.6°	120.0°
O	C	OXT	119.5°	120.0°
C	CA	CB	109.3°	109.5°
C	CA	N	108.8°	109.5°
C	CA	HA	109.1°	109.4°
CA	C	OXT	56.9°	120.0°
CD	CG	CB	110.0°	109.5°
CD	CG	H13	109.4°	109.5°
CD	CG	H14	109.3°	109.5°
CG	CD	H15	109.5°	109.5°
CG	CD	H16	109.5°	109.5°
CG	CB	CA	109.3°	109.5°
CG	CB	H11	109.5°	109.5°
CG	CB	H12	109.5°	109.4°
CB	CG	H13	109.3°	109.5°
CB	CG	H14	109.3°	109.4°
CB	CA	N	110.7°	109.5°
CB	CA	HA	109.0°	109.5°
CA	CB	H11	109.5°	109.5°
CA	CB	H12	109.5°	109.5°
CA	N	H	109.5°	111.0°
CA	N	H2	109.5°	111.0°
N	CA	HA	109.9°	109.5°
H1	C5	H6	109.4°	109.5°
H1	C5	H3	109.5°	109.5°
H6	C5	H3	109.5°	109.5°
H4	C3	H5	109.5°	109.5°
H	N	H2	109.5°	111.0°
H11	CB	H12	109.5°	109.5°
H13	CG	H14	109.5°	109.5°
H15	CD	H16	109.5°	109.5°
H17	CE	H18	109.5°	109.5°
H19	C1	H20	109.5°	109.5°
H19	C1	H21	109.5°	109.5°
H20	C1	H21	109.5°	109.4°
H22	C2	H23	109.4°	109.5°
C	OXT	HXT	90.0°	117.0°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C5	C4	C3	NZ	178.7°	179.8°
C5	C4	C3	C2	175.6°	65.3°
C5	C4	NZ	CE	0.2°	5.3°
C4	C5	H1	H6	120.0°	120.0°
C4	C5	H1	H3	120.0°	119.9°
C4	C5	H6	H3	120.0°	119.9°
C5	C4	C3	H4	55.5°	54.7°
C5	C4	C3	H5	64.3°	174.8°
C4	C3	C2	H4	120.1°	120.0°
C4	C3	C2	H5	120.1°	119.9°
C3	C4	NZ	CE	178.4°	174.5°
C4	C3	C2	C1	165.8°	180.0°
C3	C4	C5	H1	180.0°	4.9°
C3	C4	C5	H6	60.0°	124.9°
C3	C4	C5	H3	60.0°	115.1°
C4	C3	H4	H5	119.8°	120.0°
C4	C3	C2	H22	74.4°	60.0°
C4	C3	C2	H23	45.9°	60.0°
NZ	C4	C3	C2	3.0°	115.0°
C4	NZ	CE	CD	131.7°	114.8°
NZ	C4	C5	H1	1.4°	175.4°
NZ	C4	C5	H6	121.3°	55.3°
NZ	C4	C5	H3	118.6°	64.6°
NZ	C4	C3	H4	123.1°	125.0°
NZ	C4	C3	H5	117.0°	5.0°
C4	NZ	CE	H17	11.5°	5.1°
C4	NZ	CE	H18	108.1°	125.2°
C3	C2	C1	H22	119.8°	120.0°
C3	C2	C1	H23	119.8°	120.0°
C2	C3	H4	H5	119.8°	120.0°
C3	C2	C1	H19	180.0°	60.0°
C3	C2	C1	H20	60.0°	60.0°
C3	C2	C1	H21	60.0°	180.0°
C3	C2	H22	H23	120.5°	120.0°
NZ	CE	CD	H17	120.2°	119.9°
NZ	CE	CD	H18	120.2°	120.0°
NZ	CE	CD	CG	166.1°	180.0°
NZ	CE	CD	H15	46.1°	60.0°
NZ	CE	CD	H16	73.9°	60.0°
NZ	CE	H17	H18	119.4°	120.0°
CE	CD	CG	H15	120.0°	120.0°
CE	CD	CG	H16	120.0°	120.0°
CE	CD	CG	CB	164.0°	180.0°
CE	CD	CG	H13	43.9°	60.0°
CE	CD	CG	H14	76.0°	60.0°
CE	CD	H15	H16	120.0°	120.0°
CD	CE	H17	H18	119.4°	120.1°
C1	C2	C3	H4	45.7°	60.0°
C1	C2	C3	H5	74.1°	60.0°
C2	C1	H19	H20	120.0°	120.0°
C2	C1	H19	H21	120.0°	120.0°
C2	C1	H20	H21	120.0°	120.0°
C1	C2	H22	H23	120.6°	120.1°
O	C	CA	OXT	108.8°	179.9°
O	C	CA	CB	79.6°	100.0°
O	C	CA	N	41.5°	20.0°
O	C	CA	HA	161.4°	140.0°
O	C	OXT	HXT	90.0°	0.0°
C	CA	CB	CG	61.7°	175.0°
C	CA	CB	N	119.9°	120.0°
C	CA	CB	HA	119.1°	120.0°
C	CA	N	HA	119.4°	119.9°
C	CA	N	H	180.0°	60.0°
C	CA	N	H2	60.0°	176.0°
C	CA	CB	H11	58.3°	65.0°
C	CA	CB	H12	178.4°	55.0°
CA	C	OXT	HXT	90.0°	180.0°
CD	CG	CB	H13	120.1°	120.0°
CD	CG	CB	H14	120.1°	120.0°
CD	CG	CB	CA	123.4°	180.0°
CD	CG	CB	H11	116.7°	60.0°
CD	CG	CB	H12	3.4°	60.0°
CD	CG	H13	H14	119.8°	120.0°
CG	CD	H15	H16	120.1°	120.1°
CG	CD	CE	H17	73.7°	60.0°
CG	CD	CE	H18	45.9°	60.1°
CG	CB	CA	H11	120.0°	120.0°
CG	CB	CA	H12	120.0°	120.0°
CG	CB	CA	N	178.5°	65.1°
CG	CB	CA	HA	57.5°	55.0°
CG	CB	H11	H12	120.1°	120.0°
CB	CG	H13	H14	119.8°	120.0°
CB	CG	CD	H15	76.1°	60.0°
CB	CG	CD	H16	44.0°	60.1°
CB	CA	N	HA	120.5°	120.1°
CB	CA	N	H	59.9°	59.9°
CB	CA	N	H2	179.9°	64.0°
CA	CB	H11	H12	120.1°	120.0°
CA	CB	CG	H13	3.3°	60.0°
CA	CB	CG	H14	116.6°	60.0°
CB	CA	C	OXT	171.6°	80.0°
CA	N	H	H2	120.0°	123.9°
N	CA	CB	H11	61.6°	55.0°
N	CA	CB	H12	58.5°	175.0°
N	CA	C	OXT	67.4°	160.0°
H1	C5	H6	H3	120.0°	120.1°
H4	C3	C2	H22	165.5°	180.0°
H4	C3	C2	H23	74.1°	60.0°
H5	C3	C2	H22	45.7°	59.9°
H5	C3	C2	H23	166.0°	179.9°
H	N	CA	HA	60.6°	180.0°
H2	N	CA	HA	59.4°	56.1°
HA	CA	CB	H11	177.4°	175.0°
HA	CA	CB	H12	62.5°	65.0°
HA	CA	C	OXT	52.5°	40.0°
H11	CB	CG	H13	123.2°	180.0°
H11	CB	CG	H14	3.4°	60.0°
H12	CB	CG	H13	116.7°	60.0°
H12	CB	CG	H14	123.4°	180.0°
H13	CG	CD	H15	163.9°	179.9°
H13	CG	CD	H16	76.1°	60.0°
H14	CG	CD	H15	44.0°	59.9°
H14	CG	CD	H16	164.1°	180.0°
H15	CD	CE	H17	166.3°	180.0°
H15	CD	CE	H18	74.1°	60.0°
H16	CD	CE	H17	46.3°	59.9°
H16	CD	CE	H18	165.9°	180.0°
H19	C1	H20	H21	120.0°	120.0°
H19	C1	C2	H22	60.1°	180.0°
H19	C1	C2	H23	60.2°	60.0°
H20	C1	C2	H22	179.8°	60.0°
H20	C1	C2	H23	59.8°	180.0°
H21	C1	C2	H22	59.9°	60.0°
H21	C1	C2	H23	179.8°	60.0°

Release date:	2020-06-03
Definition date:	2019-11-13
Last modified:	2024-09-27
Release status:	REL
Processing site:	PDBE
Derived from:	6TF8