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SummaryGeometryRelated PDB entries

N2R

Bonds
First atomSecond atomBond order typeDistance
(experimental model)		Distance
(ideal model)		Properties
CL1PTsing2.30Å2.00Å
N13PTsing2.03Å1.90Å
N13C02sing1.48Å1.60Å
PTCL2sing2.30Å2.00Å
PTN09sing2.03Å1.90Å
C02C10sing1.53Å1.60Å
C02C21sing1.54Å1.53Å
O02C01sing1.43Å1.40Å
O02C03sing1.38Å1.40Å
C20C21sing1.54Å1.53Å
C20C18sing1.52Å1.53Å
O40C39sing1.37Å1.40Å
C10N09sing1.46Å1.50Å
C03C39doub1.39Å1.39ÅAromatic
C03C04sing1.40Å1.39ÅAromatic
C30O31sing1.46Å1.50Å
C30C29sing1.53Å1.50Å
C39C36sing1.39Å1.39ÅAromatic
C18N17sing1.36Å1.46Å
C18O19doub1.23Å1.18Å
O31C32sing1.36Å1.50Å
N17C16sing1.47Å1.39Å
C04C05doub1.40Å1.39ÅAromatic
C29C16sing1.54Å1.50Å
C29C34sing1.53Å1.50Å
C38O37sing1.43Å1.40Å
C36O37sing1.38Å1.40Å
C36C35doub1.40Å1.39ÅAromatic
C32O33doub1.20Å1.20Å
C32C34sing1.51Å1.50Å
C16C15sing1.53Å1.50Å
C05C35sing1.39Å1.39ÅAromatic
C05C06sing1.54Å1.46Å
C34C06sing1.54Å1.50Å
C15C14doub1.40Å1.50ÅAromatic
C15C07sing1.40Å1.40ÅAromatic
C06C07sing1.53Å1.60Å
C14C13sing1.36Å1.50ÅAromatic
C07C08doub1.41Å1.50ÅAromatic
C13O12sing1.38Å1.40Å
C13C09doub1.38Å1.40ÅAromatic
C08C09sing1.36Å1.50ÅAromatic
O12C11sing1.43Å1.40Å
C09O10sing1.38Å1.40Å
C11O10sing1.43Å1.40Å
C01H1sing0.97Å1.10Å
C01H2sing0.97Å1.10Å
C01H3sing0.97Å1.10Å
C02H4sing0.99Å1.10Å
C04H5sing0.94Å1.08Å
C06H6sing1.00Å1.10Å
C08H7sing0.96Å1.08Å
C10H9sing0.97Å1.10Å
C10H10sing0.97Å1.10Å
C11H11sing0.98Å1.10Å
C14H13sing0.94Å1.08Å
C16H14sing0.99Å1.10Å
N17H15sing0.88Å1.00Å
C20H16sing0.98Å1.10Å
C20H17sing0.98Å1.10Å
C21H18sing0.98Å1.10Å
C21H19sing0.98Å1.10Å
C29H20sing1.00Å1.10Å
C30H21sing0.99Å1.10Å
C30H22sing0.99Å1.10Å
C34H23sing1.00Å1.10Å
C35H24sing0.94Å1.08Å
C38H25sing0.97Å1.10Å
C38H26sing0.97Å1.10Å
C38H27sing0.97Å1.10Å
O40H28sing0.86Å0.95Å
C11H8sing0.98Å1.10Å
N09H29sing0.88Å1.00Å
N13H12sing0.89Å1.00Å
HN1N09sing0.88Å1.00Å
HN2N13sing0.89Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)		Angle
(ideal model)
CL1PTN1384.0°91.6°
CL1PTCL2100.1°89.9°
CL1PTN09176.0°176.1°
PTN13C02105.6°106.6°
N13PTCL2175.8°176.1°
N13PTN0992.0°86.8°
PTN13H12110.4°106.0°
PTN13HN2110.4°111.1°
N13C02C10109.5°108.5°
N13C02C21111.0°114.1°
N13C02H4108.8°106.7°
C02N13H12110.4°112.6°
C02N13HN2110.4°111.4°
CL2PTN0983.8°91.5°
PTN09C10107.4°107.0°
PTN09H29110.0°106.5°
PTN09HN1110.0°111.3°
C10C02C21109.0°111.3°
C02C10N09113.8°110.6°
C10C02H4108.9°107.9°
C02C10H9108.4°109.6°
C02C10H10108.4°109.4°
C02C21C20113.8°115.6°
C21C02H4109.7°108.0°
C02C21H18108.4°108.6°
C02C21H19108.4°108.0°
C01O02C03113.9°122.2°
O02C01H1109.5°109.6°
O02C01H2109.4°109.4°
O02C01H3109.4°109.6°
O02C03C39119.9°112.5°
O02C03C04120.2°127.8°
C21C20C18112.0°113.1°
C21C20H16108.8°108.8°
C21C20H17108.9°109.9°
C20C21H18108.3°108.7°
C20C21H19108.4°108.4°
C20C18N17120.6°115.7°
C20C18O19119.6°120.1°
C18C20H16108.9°108.6°
C18C20H17108.8°108.9°
O40C39C03119.9°118.4°
O40C39C36120.1°121.5°
C39O40H28109.5°112.5°
N09C10H9108.4°109.5°
N09C10H10108.4°109.4°
C10N09H29110.0°111.4°
C10N09HN1110.0°111.6°
C39C03C04119.9°119.7°
C03C39C36119.9°120.1°
C03C04C05120.2°120.8°
C03C04H5119.9°120.1°
O31C30C29107.3°103.5°
C30O31C32107.8°110.4°
O31C30H21110.0°110.5°
O31C30H22110.0°111.0°
C30C29C16123.7°120.3°
C30C29C34105.5°101.1°
C30C29H20104.9°107.2°
C29C30H21110.0°111.0°
C29C30H22110.0°111.6°
C39C36O37120.3°112.5°
C39C36C35120.1°119.8°
N17C18O19119.7°124.1°
C18N17C16120.2°125.4°
C18N17H15119.9°119.3°
O31C32O33126.4°121.1°
O31C32C34106.8°108.8°
N17C16C29108.4°107.9°
N17C16C15109.5°113.8°
N17C16H14109.6°107.7°
C16N17H15119.9°115.4°
C04C05C35119.6°118.9°
C04C05C06121.2°123.2°
C05C04H5119.9°119.1°
C16C29C34111.4°111.8°
C29C16C15113.2°111.2°
C29C16H14108.0°108.3°
C16C29H20104.9°107.6°
C29C34C32107.7°102.0°
C29C34C06113.7°113.9°
C34C29H20104.9°108.1°
C29C34H23103.1°107.6°
C38O37C36113.5°122.1°
O37C38H25109.5°109.6°
O37C38H26109.5°109.4°
O37C38H27109.5°109.5°
O37C36C35119.7°127.8°
C36C35C05120.3°120.7°
C36C35H24119.8°120.1°
O33C32C34126.8°130.0°
C32C34C06123.6°122.0°
C32C34H23103.0°105.0°
C16C15C14120.4°116.4°
C16C15C07120.6°123.8°
C15C16H14108.0°107.8°
C35C05C06119.2°117.9°
C05C35H24119.9°119.2°
C05C06C34110.7°115.2°
C05C06C07109.7°113.1°
C05C06H6108.8°106.7°
C34C06C07111.9°109.0°
C34C06H6108.3°106.3°
C06C34H23103.0°105.3°
C14C15C07118.9°119.8°
C15C14C13120.0°118.4°
C15C14H13120.0°120.9°
C15C07C06121.8°123.2°
C15C07C08121.4°120.2°
C06C07C08116.9°116.7°
C07C06H6107.2°105.9°
C14C13O12131.7°128.1°
C14C13C09120.5°121.9°
C13C14H13120.0°120.7°
C07C08C09119.3°118.1°
C07C08H7120.4°120.8°
O12C13C09107.8°110.0°
C13O12C11107.6°105.7°
C13C09C08119.9°121.6°
C13C09O10108.5°110.1°
C08C09O10131.5°128.3°
C09C08H7120.4°121.1°
O12C11O10108.3°108.7°
O12C11H11109.8°109.9°
O12C11H8109.8°109.9°
C09O10C11107.2°105.6°
O10C11H11109.8°109.9°
O10C11H8109.8°109.9°
H1C01H2109.5°109.4°
H1C01H3109.5°109.6°
H2C01H3109.5°109.3°
H9C10H10109.5°108.4°
H11C11H8109.4°108.5°
H16C20H17109.5°107.3°
H18C21H19109.5°107.2°
H21C30H22109.5°109.1°
H25C38H26109.5°109.4°
H25C38H27109.5°109.5°
H26C38H27109.5°109.4°
H29N09HN1109.5°108.9°
H12N13HN2109.5°109.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)		Torsion
(ideal model)
CL1PTN13CL2178.6°112.5°
CL1PTN13N09179.3°176.4°
CL1PTN13C02148.5°159.8°
CL1PTCL2N09179.3°176.3°
CL1PTN09C1019.8°76.7°
CL1PTN09H2999.8°42.6°
CL1PTN13H1229.1°80.1°
CL1PTN09HN1139.5°161.2°
CL1PTN13HN292.1°38.3°
PTN13C02H12119.4°115.8°
PTN13C02HN2119.4°121.3°
N13PTCL2N090.7°63.8°
PTN13C02C1023.9°39.3°
PTN13C02C21144.3°164.0°
N13PTN09C1030.0°10.4°
PTN13C02H494.9°76.7°
N13PTN09H2989.6°108.9°
PTN13H12HN2121.8°119.7°
N13PTN09HN1149.7°132.5°
C02N13PTCL230.1°47.3°
C02N13PTN0930.8°16.6°
N13C02C10C21121.6°126.4°
N13C02C10H4118.8°115.3°
N13C02C21H4120.2°118.6°
N13C02C21C2043.3°71.9°
N13C02C10N092.5°51.2°
N13C02C10H9123.1°69.6°
N13C02C10H10118.1°171.7°
N13C02C21H1877.4°165.7°
N13C02C21H19163.9°49.7°
C02N13H12HN2121.8°124.2°
CL2PTN09C10149.9°173.1°
CL2PTN09H2990.4°67.6°
CL2PTN13H12149.4°167.4°
CL2PTN09HN130.3°51.0°
CL2PTN13HN289.3°74.1°
PTN09C10C0220.4°35.2°
PTN09C10H29119.7°116.1°
PTN09C10HN1119.7°122.0°
PTN09C10H9100.2°85.7°
PTN09C10H10141.0°155.7°
PTN09H29HN1121.0°120.2°
N09PTN13H12150.2°103.5°
N09PTN13HN288.6°138.1°
C10C02C21H4119.1°118.3°
C10C02C21C20164.0°164.9°
C02C10N09H9120.6°120.8°
C02C10N09H10120.6°120.6°
C02C10H9H10118.0°119.3°
C10C02C21H1843.3°42.5°
C10C02C21H1975.4°73.5°
C02C10N09H2999.3°80.9°
C10C02N13H12143.3°76.4°
C02C10N09HN1140.1°157.1°
C10C02N13HN295.5°160.6°
C02C21C20H18120.7°122.4°
C02C21C20H19120.7°121.4°
C02C21C20C18118.1°129.0°
C21C02C10N09124.0°177.5°
C21C02C10H9115.3°56.7°
C21C02C10H103.4°61.9°
C02C21C20H16121.5°110.2°
C02C21C20H172.3°7.0°
C02C21H18H19118.0°116.5°
C21C02N13H1296.3°48.3°
C21C02N13HN224.9°74.7°
C01O02C03C39130.6°179.6°
C01O02C03C0449.7°0.7°
O02C01H1H2120.0°119.9°
O02C01H1H3120.0°120.2°
O02C01H2H3120.0°120.0°
O02C03C39O400.3°0.0°
O02C03C39C04179.7°179.7°
O02C03C39C36180.0°180.0°
O02C03C04C05179.7°179.6°
C03O02C01H1180.0°60.4°
C03O02C01H260.0°179.7°
C03O02C01H360.0°59.9°
O02C03C04H50.3°0.7°
C21C20C18H16120.4°120.9°
C21C20C18H17120.4°122.6°
C21C20C18N17130.4°86.6°
C21C20C18O1949.7°94.0°
C20C21C02H476.9°46.7°
C21C20H16H17118.9°118.9°
C20C21H18H19118.0°116.9°
C20C18N17O19180.0°179.4°
C20C18N17C16179.8°177.3°
C20C18N17H150.2°3.2°
C18C20H16H17118.8°117.6°
C18C20C21H182.5°6.7°
C18C20C21H19121.2°109.6°
O40C39C03C36179.7°180.0°
O40C39C03C04180.0°179.8°
O40C39C36O370.3°0.0°
O40C39C36C35180.0°179.9°
N09C10C02H4116.3°64.1°
N09C10H9H10118.0°119.2°
C10N09H29HN1121.0°123.5°
C39C03C04C050.0°0.7°
C03C39C36O37180.0°180.0°
C03C39C36C350.3°0.1°
C39C03C04H5180.0°179.6°
C03C39O40H28180.0°180.0°
C04C03C39C360.3°0.2°
C03C04C05H5180.0°179.0°
C03C04C05C350.3°0.9°
C03C04C05C06179.9°179.9°
O31C30C29H21119.7°118.6°
O31C30C29H22119.6°119.5°
O31C30C29C16151.4°158.8°
O31C30C29C3421.5°35.1°
C30O31C32O33179.3°179.9°
C30O31C32C340.4°1.1°
O31C30C29H2088.9°78.0°
O31C30H21H22121.0°122.3°
C29C30O31C3213.7°22.0°
C30C29C16N1759.4°74.9°
C30C29C16C34127.4°118.4°
C30C29C16H20119.7°123.0°
C30C29C34H20110.4°112.4°
C30C29C34C3221.3°35.2°
C30C29C16C15178.8°159.7°
C30C29C34C06162.1°168.6°
C30C29C16H1459.3°41.5°
C29C30H21H22121.0°123.4°
C30C29C34H2387.1°75.0°
C39C36O37C38115.4°179.9°
C39C36O37C35179.7°179.9°
C39C36C35C050.1°0.4°
C39C36C35H24180.0°179.8°
C36C39O40H280.3°0.0°
C18N17C16H15180.0°179.5°
C18N17C16C2993.7°96.0°
C18N17C16C15142.3°140.2°
C18N17C16H1424.0°20.8°
N17C18C20H1610.0°152.5°
N17C18C20H17109.2°36.0°
O19C18N17C160.2°3.3°
O19C18N17H15179.8°176.2°
O19C18C20H16170.0°26.9°
O19C18C20H1770.7°143.5°
O31C32C34C2913.0°23.7°
O31C32O33C34179.6°178.7°
O31C32C34C06148.9°152.1°
C32O31C30H21105.9°141.0°
C32O31C30H22133.4°97.8°
O31C32C34H2395.5°88.5°
N17C16C29C15121.8°125.4°
N17C16C29H14118.7°116.4°
N17C16C29C34173.2°166.7°
N17C16C15H14119.3°119.4°
N17C16C15C1437.2°47.1°
N17C16C15C07142.7°134.8°
N17C16C29H2060.3°48.1°
C04C05C35C360.3°0.8°
C04C05C35C06179.5°179.0°
C04C05C06C3488.1°83.3°
C04C05C06C0735.9°43.0°
C04C05C06H6153.0°159.0°
C04C05C35H24179.7°179.7°
C16C29C34H20112.9°118.3°
C16C29C34C32158.0°164.5°
C29C16C15H14119.6°118.6°
C16C29C34C0661.2°62.1°
C29C16C15C14158.4°169.2°
C29C16C15C0721.6°12.8°
C29C16N17H1586.3°83.5°
C16C29C30H2131.7°82.7°
C16C29C30H2289.0°39.3°
C16C29C34H2349.5°54.2°
C29C34C32O33167.3°157.5°
C29C34C32C06135.9°128.4°
C29C34C32H23108.5°112.2°
C34C29C16C1551.4°41.3°
C29C34C06C0585.1°80.9°
C29C34C06H23110.8°117.7°
C29C34C06C0737.6°47.4°
C29C34C06H6155.6°161.2°
C34C29C16H1468.1°76.9°
C34C29C30H2198.2°153.7°
C34C29C30H22141.1°84.3°
C38O37C36C3564.3°0.0°
O37C38H25H26120.0°119.9°
O37C38H25H27120.0°120.2°
O37C38H26H27120.0°120.0°
O37C36C35C05179.7°179.7°
O37C36C35H240.3°0.2°
C36O37C38H25180.0°60.0°
C36O37C38H2660.0°180.0°
C36O37C38H2760.0°60.1°
C36C35C05H24180.0°179.5°
C36C35C05C06179.9°179.8°
O33C32C34C0631.4°29.1°
O33C32C34H2384.2°90.3°
C32C34C06C0548.5°42.1°
C32C34C06H23115.6°119.3°
C32C34C06C07171.3°170.4°
C32C34C06H670.7°75.8°
C32C34C29H2089.1°77.2°
C16C15C14C07180.0°178.1°
C16C15C07C060.3°1.1°
C16C15C14C13179.9°179.6°
C16C15C07C08179.8°179.1°
C16C15C14H130.1°1.6°
C15C16N17H1537.7°40.4°
C15C16C29H2061.4°77.3°
C35C05C06C3492.4°97.8°
C35C05C06C07143.6°136.0°
C35C05C04H5179.7°179.9°
C35C05C06H626.6°20.0°
C05C06C34C07122.7°128.3°
C05C06C34H6119.3°117.9°
C05C06C07C15115.6°111.9°
C05C06C07H6118.1°116.5°
C05C06C07C0864.9°67.9°
C06C05C04H50.1°1.1°
C05C06C34H23164.1°161.4°
C06C05C35H240.1°0.7°
C34C06C07C157.6°17.6°
C34C06C07H6118.7°114.0°
C34C06C07C08171.9°162.6°
C06C34C29H2051.6°56.2°
C14C15C07C06179.8°179.0°
C15C14C13H13180.0°178.8°
C14C15C07C080.3°1.2°
C15C14C13O12179.8°179.3°
C15C14C13C090.2°1.0°
C14C15C16H1482.0°72.2°
C15C07C06C08179.5°179.8°
C07C15C14C130.1°1.5°
C15C07C08C090.5°0.3°
C15C07C06H6126.3°131.6°
C15C07C08H7179.5°179.4°
C07C15C14H13179.9°179.7°
C07C15C16H1498.0°105.8°
C06C07C08C09180.0°179.9°
C06C07C08H70.0°0.4°
C07C06C34H2373.2°70.3°
C14C13O12C09179.7°179.8°
C14C13C09C080.4°0.1°
C14C13O12C11175.4°179.9°
C14C13C09O10180.0°179.8°
C07C08C09C130.6°0.2°
C07C08C09H7180.0°179.7°
C07C08C09O10179.9°179.9°
C08C07C06H653.2°48.6°
O12C13C09C08179.9°179.9°
O12C13C09O100.2°0.0°
C13O12C11O107.2°0.2°
C13O12C11H11127.0°120.1°
O12C13C14H130.2°0.4°
C13O12C11H8112.7°120.5°
C13C09C08O10179.6°179.9°
C09C13O12C114.3°0.1°
C13C09O10C114.6°0.1°
C13C09C08H7179.5°179.9°
C09C13C14H13179.8°179.8°
C08C09O10C11175.8°180.0°
O12C11O10C097.3°0.2°
O12C11O10H11119.8°120.3°
O12C11O10H8119.8°120.3°
O12C11H11H8120.5°120.3°
O10C09C08H70.1°0.2°
C09O10C11H11127.1°120.1°
C09O10C11H8112.5°120.6°
O10C11H11H8120.6°120.1°
H1C01H2H3120.0°120.0°
H4C02C10H94.3°175.1°
H4C02C10H10123.0°56.4°
H4C02C21H18162.4°75.8°
H4C02C21H1943.7°168.2°
H4C02N13H1224.5°167.6°
H4C02N13HN2145.7°44.6°
H6C06C34H2344.8°43.5°
H9C10N09H29140.1°158.2°
H9C10N09HN119.4°36.3°
H10C10N09H2921.4°39.6°
H10C10N09HN199.3°82.3°
H14C16N17H15156.0°159.7°
H14C16C29H20179.0°164.5°
H16C20C21H18117.8°127.4°
H16C20C21H190.8°11.2°
H17C20C21H18122.9°115.3°
H17C20C21H19118.4°128.4°
H20C29C30H21151.4°40.6°
H20C29C30H2230.7°162.5°
H20C29C34H23162.4°172.6°
H25C38H26H27120.0°120.0°

259351

PDB entries from 2026-09-09

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