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N0B

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1O2doub1.21Å1.23Å
C1C3sing1.51Å1.49Å
C1O3Asing1.34Å1.35Å
N1C2doub1.32Å1.40ÅAromatic
N1C6sing1.33Å1.34ÅAromatic
C2N3sing1.32Å1.37ÅAromatic
C3N4sing1.47Å1.47Å
C3C7sing1.53Å1.54Å
N3C4doub1.33Å1.36ÅAromatic
C4C5sing1.40Å1.35ÅAromatic
C4N9sing1.37Å1.33ÅAromatic
C5C6doub1.41Å1.34ÅAromatic
C5N7sing1.35Å1.34ÅAromatic
C6N6sing1.38Å1.32Å
C7C9sing1.53Å1.52Å
N7C8doub1.30Å1.34ÅAromatic
C8N9sing1.36Å1.35ÅAromatic
C9C10sing1.53Å1.51Å
N9C1'sing1.46Å1.48Å
PAO1Adoub1.48Å1.47Å
PAO2Asing1.61Å1.48Å
PAO3Asing1.61Å1.51Å
PAO5'sing1.61Å1.60Å
C1'C2'sing1.54Å1.52Å
C1'O4'sing1.44Å1.41Å
C10C11sing1.53Å1.50Å
C11N12sing1.47Å1.46Å
N12C22sing1.35Å1.32Å
C2'O2'sing1.43Å1.40Å
C2'C3'sing1.55Å1.50Å
C22O23doub1.22Å1.24Å
C22O24sing1.35Å1.34Å
O24C25sing1.45Å1.44Å
C25C26sing1.53Å1.51Å
C26C27sing1.55Å1.57Å
C26C31sing1.56Å1.52Å
C27C28sing1.56Å1.49Å
C28C29sing1.53Å1.52Å
C28C32sing1.57Å1.51Å
C29C30doub1.32Å1.35Å
C3'O3'sing1.43Å1.40Å
C3'C4'sing1.54Å1.48Å
C30C31sing1.53Å1.53Å
C31C32sing1.57Å1.47Å
C4'O4'sing1.44Å1.47Å
C4'C5'sing1.53Å1.51Å
C5'O5'sing1.43Å1.40Å
C2H2sing1.08Å1.08Å
C3H3sing1.09Å1.10Å
N4HN4sing1.01Å1.00Å
N4HN4Asing1.01Å1.00Å
N6HN6sing0.97Å1.00Å
N6HN6Asing0.97Å1.00Å
C7H7sing1.09Å1.10Å
C7H7Asing1.09Å1.10Å
C8H8sing1.08Å1.08Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
C1'H1'sing1.09Å1.10Å
C10H10sing1.09Å1.10Å
C10H10Asing1.09Å1.10Å
C11H11sing1.09Å1.10Å
C11H11Asing1.09Å1.10Å
N12HN12sing0.97Å1.00Å
C2'H2'sing1.09Å1.10Å
O2'HO2'sing0.97Å0.95Å
C25H25sing1.09Å1.10Å
C25H25Asing1.09Å1.10Å
C26H26sing1.09Å1.10Å
C27H27sing1.09Å1.10Å
C27H27Asing1.09Å1.10Å
C28H28sing1.09Å1.10Å
C29H29sing1.08Å1.08Å
C3'H3'sing1.09Å1.10Å
O3'HO3'sing0.97Å0.95Å
C30H30sing1.08Å1.08Å
C31H31sing1.09Å1.10Å
C32H32sing1.09Å1.10Å
C32H32Asing1.09Å1.10Å
C4'H4'sing1.09Å1.10Å
C5'H5'sing1.09Å1.10Å
C5'H5'Asing1.09Å1.10Å
O2AH2Asing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O2C1C3120.6°120.0°
O2C1O3A125.7°120.0°
C3C1O3A113.7°120.0°
C1C3N4103.3°109.5°
C1C3C7108.9°109.5°
C1C3H3110.1°109.4°
C1O3APA115.1°117.1°
C2N1C6119.6°121.1°
N1C2N3118.5°122.5°
N1C2H2120.8°118.7°
N1C6C5121.6°118.4°
N1C6N6120.7°120.8°
C2N3C4119.0°120.6°
N3C2H2120.7°118.7°
N4C3C7114.4°109.5°
N4C3H3110.4°109.4°
C3N4HN4109.5°111.0°
C3N4HN4A109.5°111.0°
C3C7C9107.2°109.5°
C7C3H3109.4°109.5°
C3C7H7110.0°109.5°
C3C7H7A110.0°109.5°
N3C4C5121.7°119.1°
N3C4N9130.3°134.9°
C5C4N9107.9°106.0°
C4C5C6119.5°118.2°
C4C5N7108.6°107.2°
C4N9C8107.2°107.4°
C4N9C1'118.3°126.3°
C6C5N7132.0°134.7°
C5C6N6117.7°120.8°
C5N7C8107.2°109.4°
C6N6HN6109.5°120.0°
C6N6HN6A109.5°120.0°
C7C9C10102.1°109.5°
C9C7H7110.0°109.5°
C9C7H7A110.0°109.4°
C7C9H9111.3°109.4°
C7C9H9A111.3°109.5°
N7C8N9109.1°110.0°
N7C8H8125.4°125.0°
C8N9C1'134.4°126.3°
N9C8H8125.5°125.0°
C9C10C11109.1°109.5°
C10C9H9111.3°109.5°
C10C9H9A111.3°109.5°
C9C10H10109.6°109.4°
C9C10H10A109.6°109.5°
N9C1'C2'118.1°110.4°
N9C1'O4'105.6°110.4°
N9C1'H1'109.2°110.3°
O1APAO2A121.7°109.4°
O1APAO3A106.9°109.4°
O1APAO5'109.8°109.5°
O2APAO3A107.1°109.5°
O2APAO5'107.7°109.5°
PAO2AH2A109.5°114.0°
O3APAO5'101.8°109.5°
PAO5'C5'121.2°122.9°
C2'C1'O4'104.8°104.8°
C1'C2'O2'109.3°110.5°
C1'C2'C3'105.0°104.1°
C2'C1'H1'108.7°110.4°
C1'C2'H2'112.7°110.5°
C1'O4'C4'101.2°105.3°
O4'C1'H1'110.2°110.4°
C10C11N12107.4°109.5°
C11C10H10109.6°109.5°
C11C10H10A109.6°109.5°
C10C11H11110.0°109.5°
C10C11H11A110.0°109.5°
C11N12C22118.1°120.0°
N12C11H11110.0°109.5°
N12C11H11A110.0°109.4°
C11N12HN12120.9°120.0°
N12C22O23120.1°120.0°
N12C22O24119.7°120.0°
C22N12HN12121.0°120.0°
O2'C2'C3'101.2°110.5°
O2'C2'H2'114.7°110.5°
C2'O2'HO2'109.5°114.0°
C2'C3'O3'109.6°110.5°
C2'C3'C4'98.2°104.1°
C3'C2'H2'112.9°110.6°
C2'C3'H3'111.3°110.5°
O23C22O24120.2°120.0°
C22O24C25110.1°117.0°
O24C25C26105.8°109.5°
O24C25H25110.4°109.4°
O24C25H25A110.4°109.5°
C25C26C27110.2°110.6°
C25C26C31112.3°110.6°
C26C25H25110.4°109.5°
C26C25H25A110.4°109.5°
C25C26H26110.8°110.5°
C27C26C31102.9°103.7°
C26C27C2898.7°103.7°
C27C26H26109.8°110.6°
C26C27H27112.1°110.6°
C26C27H27A112.1°110.6°
C26C31C30112.7°104.1°
C26C31C3299.6°100.4°
C31C26H26110.5°110.7°
C26C31H31114.6°116.3°
C27C28C29110.4°104.1°
C27C28C32101.9°100.4°
C28C27H27112.1°110.5°
C28C27H27A112.1°110.6°
C27C28H28113.2°116.3°
C29C28C32105.2°99.8°
C28C29C30101.3°108.5°
C29C28H28112.6°116.3°
C28C29H29129.4°125.8°
C28C32C3191.7°93.4°
C32C28H28112.8°117.4°
C28C32H32113.7°112.6°
C28C32H32A113.7°112.5°
C29C30C31107.8°108.4°
C30C29H29129.3°125.8°
C29C30H30126.1°125.8°
O3'C3'C4'112.1°110.5°
O3'C3'H3'112.9°110.5°
C3'O3'HO3'109.5°114.0°
C3'C4'O4'101.3°104.8°
C3'C4'C5'112.4°110.4°
C4'C3'H3'111.7°110.6°
C3'C4'H4'109.5°110.4°
C30C31C3298.1°99.8°
C31C30H30126.1°125.7°
C30C31H31114.4°116.4°
C32C31H31115.5°117.3°
C31C32H32113.7°112.5°
C31C32H32A113.7°112.5°
O4'C4'C5'114.7°110.4°
O4'C4'H4'109.7°110.4°
C4'C5'O5'99.2°109.4°
C5'C4'H4'109.0°110.4°
C4'C5'H5'112.0°109.5°
C4'C5'H5'A112.0°109.5°
O5'C5'H5'112.0°109.5°
O5'C5'H5'A112.0°109.5°
HN4N4HN4A109.4°111.0°
HN6N6HN6A109.5°120.0°
H7C7H7A109.5°109.5°
H9C9H9A109.5°109.5°
H10C10H10A109.5°109.5°
H11C11H11A109.4°109.5°
H25C25H25A109.5°109.5°
H27C27H27A109.5°110.7°
H32C32H32A109.5°112.1°
H5'C5'H5'A109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O2C1C3O3A178.0°179.8°
O2C1C3N449.9°20.1°
O2C1C3C7171.9°100.0°
O2C1O3APA38.7°0.1°
O2C1C3H368.1°140.0°
C1C3N4C7118.3°120.0°
C1C3N4H3117.7°119.9°
C1C3C7H3120.4°120.0°
C1C3C7C9173.3°175.0°
C3C1O3APA143.5°179.7°
C1C3N4HN4180.0°60.1°
C1C3N4HN4A60.0°63.9°
C1C3C7H753.6°55.0°
C1C3C7H7A67.1°65.1°
O3AC1C3N4128.1°159.7°
O3AC1C3C76.1°80.2°
C1O3APAO1A174.2°55.0°
C1O3APAO2A53.9°64.9°
C1O3APAO5'59.0°175.0°
O3AC1C3H3113.9°39.8°
N1C2N3H2180.0°180.0°
N1C2N3C40.1°0.0°
C2N1C6C51.1°0.1°
C2N1C6N6178.5°180.0°
C6N1C2N30.6°0.1°
N1C6C5C41.0°0.0°
N1C6C5N6177.4°179.9°
N1C6C5N7178.3°180.0°
C6N1C2H2179.4°179.9°
N1C6N6HN60.0°0.1°
N1C6N6HN6A120.0°180.0°
C2N3C4C50.2°0.0°
C2N3C4N9179.1°179.9°
N4C3C7H3124.5°120.0°
N4C3C7C971.7°65.0°
C3N4HN4HN4A120.0°124.0°
N4C3C7H7168.7°175.0°
N4C3C7H7A48.0°55.0°
C3C7C9H7119.6°120.0°
C3C7C9H7A119.7°120.0°
C3C7C9C10148.5°180.0°
C7C3N4HN461.7°60.0°
C7C3N4HN4A58.3°176.0°
C3C7H7H7A121.0°120.0°
C3C7C9H929.8°60.0°
C3C7C9H9A92.7°60.0°
N3C4C5N9179.1°179.9°
N3C4C5C60.3°0.0°
N3C4C5N7179.1°180.0°
N3C4N9C8178.8°180.0°
N3C4N9C1'2.6°0.1°
C4N3C2H2179.9°180.0°
C4C5C6N7179.3°180.0°
C4C5C6N6178.4°179.9°
C4C5N7C80.6°0.0°
C5C4N9C82.2°0.0°
C5C4N9C1'178.4°180.0°
N9C4C5C6178.8°179.9°
N9C4C5N71.7°0.0°
C4N9C8N71.9°0.0°
C4N9C8C1'175.3°180.0°
C4N9C1'C2'101.0°79.9°
C4N9C1'O4'142.3°164.6°
C4N9C8H8178.1°180.0°
C4N9C1'H1'23.8°42.4°
C6C5N7C8179.9°180.0°
C5C6N6HN6177.4°180.0°
C5C6N6HN6A57.4°0.1°
N7C5C6N60.9°0.1°
C5N7C8N90.8°0.0°
C5N7C8H8179.2°180.0°
C6N6HN6HN6A120.0°179.9°
C7C9C10H9118.8°120.0°
C7C9C10H9A118.8°120.0°
C7C9C10C11167.5°180.0°
C9C7C3H352.8°55.0°
C9C7H7H7A121.0°119.9°
C7C9H9H9A123.5°120.0°
C7C9C10H1072.6°60.0°
C7C9C10H10A47.5°60.0°
N7C8N9H8180.0°180.0°
N7C8N9C1'177.2°180.0°
C8N9C1'C2'84.1°100.0°
C8N9C1'O4'32.6°15.4°
C8N9C1'H1'151.1°137.7°
C9C10C11H10119.9°120.0°
C9C10C11H10A120.0°120.0°
C9C10C11N1261.1°180.0°
C10C9C7H791.8°60.0°
C10C9C7H7A28.9°60.0°
C10C9H9H9A123.4°120.0°
C9C10H10H10A120.2°120.0°
C9C10C11H1158.6°60.0°
C9C10C11H11A179.2°60.0°
N9C1'C2'O4'117.1°118.8°
N9C1'C2'H1'125.0°122.2°
N9C1'O4'H1'117.8°122.2°
N9C1'C2'O2'138.8°146.5°
N9C1'C2'C3'113.4°94.9°
N9C1'O4'C4'91.2°78.4°
C1'N9C8H82.8°0.0°
N9C1'C2'H2'9.9°23.9°
O1APAO2AO3A123.2°119.9°
O1APAO2AO5'127.9°120.0°
O1APAO3AO5'115.2°120.0°
O1APAO5'C5'15.7°55.0°
O1APAO2AH2A156.6°180.0°
O2APAO3AO5'112.9°120.1°
O2APAO5'C5'150.1°65.0°
O3APAO5'C5'97.4°175.0°
O3APAO2AH2A33.4°60.1°
PAO5'C5'C4'98.8°180.0°
PAO5'C5'H5'142.9°60.0°
PAO5'C5'H5'A19.6°60.0°
O5'PAO2AH2A75.5°59.9°
C2'C1'O4'H1'116.8°118.9°
C1'C2'O2'C3'110.4°114.6°
C1'C2'O2'H2'127.7°122.6°
C1'C2'C3'H2'123.1°118.7°
C1'C2'C3'O3'144.8°118.6°
C1'C2'C3'C4'27.7°0.0°
C2'C1'O4'C4'34.2°40.5°
C1'C2'O2'HO2'180.0°180.0°
C1'C2'C3'H3'89.5°118.7°
O4'C1'C2'O2'104.1°94.7°
O4'C1'C2'C3'3.8°24.0°
C1'O4'C4'C3'53.8°40.5°
C1'O4'C4'C5'175.1°159.3°
O4'C1'C2'H2'127.1°142.8°
C1'O4'C4'H4'61.8°78.3°
C10C11N12H11119.7°120.0°
C10C11N12H11A119.7°120.0°
C10C11N12C22149.7°180.0°
C11C10C9H948.7°60.0°
C11C10C9H9A73.7°60.0°
C11C10H10H10A120.2°120.0°
C10C11H11H11A121.0°120.0°
C10C11N12HN1230.3°0.1°
C11N12C22HN12180.0°179.9°
C11N12C22O231.5°0.0°
C11N12C22O24176.3°180.0°
N12C11C10H10179.0°60.0°
N12C11C10H10A58.9°60.0°
N12C11H11H11A121.0°120.0°
N12C22O23O24177.8°180.0°
N12C22O24C25121.2°180.0°
C22N12C11H1130.0°60.0°
C22N12C11H11A90.6°60.0°
O2'C2'C3'H2'123.2°122.7°
O2'C2'C3'O3'101.5°122.7°
O2'C2'C3'C4'141.4°118.6°
O2'C2'C1'H1'13.7°24.3°
O2'C2'C3'H3'24.2°0.1°
C2'C3'O3'C4'108.0°114.6°
C2'C3'O3'H3'124.7°122.6°
C2'C3'C4'H3'117.0°118.7°
C2'C3'C4'O4'49.2°24.0°
C2'C3'C4'C5'172.1°142.8°
C3'C2'C1'H1'121.6°142.9°
C3'C2'O2'HO2'69.5°65.3°
C2'C3'O3'HO3'180.0°61.5°
C2'C3'C4'H4'66.6°94.8°
O23C22O24C2561.0°0.0°
O23C22N12HN12178.5°179.9°
C22O24C25C26165.7°180.0°
O24C22N12HN123.7°0.0°
C22O24C25H2546.3°60.0°
C22O24C25H25A74.9°60.0°
O24C25C26H25119.4°120.0°
O24C25C26H25A119.4°120.0°
O24C25C26C27131.5°66.4°
O24C25C26C31114.4°179.3°
O24C25H25H25A121.7°120.0°
O24C25C26H269.7°56.4°
C25C26C27C31119.9°118.5°
C25C26C27H26122.3°122.8°
C25C26C31H26124.2°122.8°
C25C26C27C28118.0°118.5°
C25C26C31C3053.0°51.9°
C25C26C31C32156.0°154.9°
C26C25H25H25A121.7°120.0°
C25C26C27H27123.8°122.9°
C25C26C27H27A0.2°0.0°
C25C26C31H3180.2°77.5°
C27C26C31H26117.2°118.6°
C26C27C28H27118.2°118.6°
C26C27C28H27A118.2°118.6°
C26C27C28C2971.4°66.6°
C26C27C28C3240.0°36.3°
C27C26C31C3065.5°66.6°
C27C26C31C3237.4°36.3°
C27C26C25H2512.0°53.5°
C27C26C25H25A109.1°173.6°
C26C27H27H27A125.0°122.9°
C26C27C28H28161.4°164.0°
C27C26C31H31161.3°164.0°
C31C26C27C281.9°0.0°
C26C31C32C2859.9°57.0°
C26C31C30C2958.1°70.1°
C26C31C30C32104.0°103.4°
C26C31C30H31133.2°129.3°
C26C31C32H31123.2°127.0°
C31C26C25H25126.2°60.7°
C31C26C25H25A5.0°59.3°
C31C26C27H27116.3°118.5°
C31C26C27H27A120.1°118.5°
C26C31C30H30121.9°110.0°
C26C31C32H3257.0°59.1°
C26C31C32H32A176.8°173.1°
C27C28C29C32109.2°103.4°
C27C28C29H28127.5°129.3°
C27C28C32H28121.7°127.0°
C27C28C29C3084.1°70.1°
C27C28C32C3163.9°57.0°
C28C27C26H26119.7°118.7°
C28C27H27H27A125.0°122.8°
C27C28C29H2995.9°109.9°
C27C28C32H3253.0°59.1°
C27C28C32H32A179.2°173.0°
C29C28C32H28123.1°126.6°
C28C29C30H29180.0°180.0°
C28C29C30C3111.9°0.0°
C29C28C32C3151.3°49.4°
C29C28C27H27170.4°174.8°
C29C28C27H27A46.8°52.0°
C28C29C30H30168.1°180.0°
C29C28C32H32168.2°165.5°
C29C28C32H32A65.6°66.6°
C32C28C29C3025.1°33.3°
C28C32C31C3054.9°49.4°
C28C32C31H32116.9°116.1°
C28C32C31H32A116.9°116.1°
C32C28C27H2778.3°82.2°
C32C28C27H27A158.2°154.9°
C32C28C29H29154.9°146.7°
C28C32C31H31176.9°176.1°
C28C32H32H32A128.4°128.1°
C29C30C31H30180.0°180.0°
C29C30C31C3245.9°33.3°
C30C29C28H28148.4°160.6°
C29C30C31H31168.7°160.6°
O3'C3'C4'H3'127.9°122.7°
O3'C3'C4'O4'164.4°142.6°
O3'C3'C4'C5'72.7°98.5°
O3'C3'C2'H2'21.7°0.1°
O3'C3'C4'H4'48.6°23.8°
C3'C4'O4'C5'121.3°118.9°
C3'C4'O4'H4'115.7°118.8°
C3'C4'C5'H4'121.6°122.3°
C3'C4'C5'O5'151.0°175.0°
C4'C3'C2'H2'95.4°118.7°
C4'C3'O3'HO3'72.0°176.2°
C3'C4'C5'H5'90.7°65.0°
C3'C4'C5'H5'A32.7°55.0°
C30C31C32H31122.0°126.6°
C30C31C26H26177.2°174.8°
C31C30C29H29168.1°180.0°
C30C31C32H32171.8°165.5°
C30C31C32H32A62.0°66.7°
C32C31C26H2679.8°82.3°
C31C32C28H28174.4°176.0°
C32C31C30H30134.1°146.7°
C31C32H32H32A128.4°128.0°
O4'C4'C5'H4'123.4°122.3°
O4'C4'C5'O5'94.0°69.6°
C4'O4'C1'H1'151.0°159.4°
O4'C4'C3'H3'67.7°94.7°
O4'C4'C5'H5'24.3°50.4°
O4'C4'C5'H5'A147.7°170.4°
C4'C5'O5'H5'118.3°120.0°
C4'C5'O5'H5'A118.3°120.0°
C5'C4'C3'H3'55.2°24.1°
C4'C5'H5'H5'A124.8°120.0°
O5'C5'C4'H4'29.4°52.7°
O5'C5'H5'H5'A124.8°120.0°
H3C3N4HN462.3°180.0°
H3C3N4HN4A177.8°56.0°
H3C3C7H766.8°65.0°
H3C3C7H7A172.5°175.0°
H7C7C9H9149.4°180.0°
H7C7C9H9A26.9°60.0°
H7AC7C9H989.9°60.0°
H7AC7C9H9A147.7°180.0°
H9C9C10H10168.6°180.0°
H9C9C10H10A71.3°60.0°
H9AC9C10H1046.2°60.0°
H9AC9C10H10A166.3°180.0°
H1'C1'C2'H2'115.1°98.3°
H10C10C11H1161.4°180.0°
H10C10C11H11A59.3°60.0°
H10AC10C11H11178.5°60.0°
H10AC10C11H11A60.8°180.0°
H11C11N12HN12150.0°120.0°
H11AC11N12HN1289.4°120.1°
H2'C2'O2'HO2'52.4°57.4°
H2'C2'C3'H3'147.3°122.5°
H25C25C26H26109.7°176.3°
H25AC25C26H26129.1°63.6°
H26C26C27H271.4°0.2°
H26C26C27H27A122.1°122.8°
H26C26C31H3144.0°45.3°
H27C27C28H2843.2°45.5°
H27AC27C28H2880.4°77.4°
H28C28C29H2931.6°19.4°
H28C28C32H3268.7°68.0°
H28C28C32H32A57.5°59.9°
H29C29C30H3011.9°0.1°
H3'C3'O3'HO3'55.3°61.1°
H3'C3'C4'H4'176.5°146.5°
H30C30C31H3111.3°19.4°
H31C31C32H3266.2°67.8°
H31C31C32H32A60.0°60.0°
H4'C4'C5'H5'147.7°172.7°
H4'C4'C5'H5'A88.9°67.3°

222624

PDB entries from 2024-07-17

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