MZR
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N1 | C6 | sing | 1.35Å | 1.31Å | |
| O3 | C4 | sing | 1.35Å | 1.41Å | |
| C4 | C5 | doub | 1.38Å | 1.45Å | Aromatic |
| C4 | N9 | sing | 1.36Å | 1.34Å | Aromatic |
| C5 | C6 | sing | 1.47Å | 1.47Å | |
| C5 | N7 | sing | 1.36Å | 1.35Å | Aromatic |
| C6 | O6 | doub | 1.22Å | 1.26Å | |
| N7 | C8 | doub | 1.30Å | 1.38Å | Aromatic |
| C8 | N9 | sing | 1.36Å | 1.39Å | Aromatic |
| N9 | C1' | sing | 1.46Å | 1.47Å | |
| C1' | C2' | sing | 1.55Å | 1.51Å | |
| C1' | O4' | sing | 1.44Å | 1.42Å | |
| C2' | O2' | sing | 1.43Å | 1.43Å | |
| C2' | C3' | sing | 1.55Å | 1.54Å | |
| C3' | O3' | sing | 1.43Å | 1.45Å | |
| C3' | C4' | sing | 1.54Å | 1.52Å | |
| C4' | O4' | sing | 1.44Å | 1.45Å | |
| C4' | C5' | sing | 1.53Å | 1.53Å | |
| C5' | O5' | sing | 1.43Å | 1.49Å | |
| N1 | HN1 | sing | 0.97Å | 1.00Å | |
| N1 | HN1A | sing | 0.97Å | 1.00Å | |
| O3 | HO3 | sing | 0.97Å | 0.95Å | |
| C8 | H8 | sing | 1.08Å | 1.08Å | |
| C1' | H1' | sing | 1.09Å | 1.10Å | |
| C2' | H2' | sing | 1.09Å | 1.10Å | |
| O2' | HO2' | sing | 0.97Å | 0.95Å | |
| C3' | H3' | sing | 1.09Å | 1.10Å | |
| O3' | HO3' | sing | 0.97Å | 0.95Å | |
| C4' | H4' | sing | 1.09Å | 1.10Å | |
| C5' | H5' | sing | 1.09Å | 1.10Å | |
| C5' | H5'A | sing | 1.09Å | 1.10Å | |
| O5' | HO5' | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| N1 | C6 | C5 | 117.6° | 120.0° |
| N1 | C6 | O6 | 124.2° | 120.0° |
| C6 | N1 | HN1 | 120.0° | 120.0° |
| C6 | N1 | HN1A | 120.0° | 120.0° |
| O3 | C4 | C5 | 124.9° | 126.8° |
| O3 | C4 | N9 | 124.8° | 126.8° |
| C4 | O3 | HO3 | 109.5° | 114.0° |
| C5 | C4 | N9 | 110.2° | 106.4° |
| C4 | C5 | C6 | 122.5° | 126.4° |
| C4 | C5 | N7 | 103.9° | 107.3° |
| C4 | N9 | C8 | 106.6° | 107.7° |
| C4 | N9 | C1' | 126.9° | 126.1° |
| C6 | C5 | N7 | 133.5° | 126.3° |
| C5 | C6 | O6 | 118.2° | 120.0° |
| C5 | N7 | C8 | 110.6° | 109.2° |
| N7 | C8 | N9 | 108.5° | 109.4° |
| N7 | C8 | H8 | 125.8° | 125.3° |
| C8 | N9 | C1' | 126.0° | 126.2° |
| N9 | C8 | H8 | 125.8° | 125.3° |
| N9 | C1' | C2' | 116.6° | 110.6° |
| N9 | C1' | O4' | 103.9° | 110.6° |
| N9 | C1' | H1' | 106.7° | 110.6° |
| C2' | C1' | O4' | 102.9° | 103.5° |
| C1' | C2' | O2' | 107.1° | 110.9° |
| C1' | C2' | C3' | 103.5° | 102.1° |
| C2' | C1' | H1' | 107.6° | 110.6° |
| C1' | C2' | H2' | 118.3° | 110.9° |
| C1' | O4' | C4' | 107.1° | 107.0° |
| O4' | C1' | H1' | 119.6° | 110.7° |
| O2' | C2' | C3' | 118.3° | 110.9° |
| O2' | C2' | H2' | 103.4° | 110.8° |
| C2' | O2' | HO2' | 109.5° | 114.0° |
| C2' | C3' | O3' | 112.3° | 110.5° |
| C2' | C3' | C4' | 105.5° | 104.2° |
| C3' | C2' | H2' | 107.0° | 110.9° |
| C2' | C3' | H3' | 110.7° | 110.5° |
| O3' | C3' | C4' | 110.7° | 110.5° |
| O3' | C3' | H3' | 105.5° | 110.4° |
| C3' | O3' | HO3' | 109.5° | 114.0° |
| C3' | C4' | O4' | 101.9° | 107.3° |
| C3' | C4' | C5' | 112.5° | 109.9° |
| C4' | C3' | H3' | 112.3° | 110.6° |
| C3' | C4' | H4' | 111.8° | 109.8° |
| O4' | C4' | C5' | 107.6° | 109.8° |
| O4' | C4' | H4' | 116.5° | 109.9° |
| C4' | C5' | O5' | 118.1° | 109.5° |
| C5' | C4' | H4' | 106.6° | 110.0° |
| C4' | C5' | H5' | 106.7° | 109.5° |
| C4' | C5' | H5'A | 106.7° | 109.5° |
| O5' | C5' | H5' | 106.7° | 109.5° |
| O5' | C5' | H5'A | 106.7° | 109.5° |
| C5' | O5' | HO5' | 109.5° | 114.0° |
| HN1 | N1 | HN1A | 120.0° | 120.0° |
| H5' | C5' | H5'A | 112.1° | 109.4° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| N1 | C6 | C5 | C4 | 1.1° | 180.0° |
| N1 | C6 | C5 | O6 | 179.6° | 180.0° |
| N1 | C6 | C5 | N7 | 178.7° | 0.0° |
| C6 | N1 | HN1 | HN1A | 180.0° | 179.7° |
| O3 | C4 | C5 | N9 | 177.0° | 179.8° |
| O3 | C4 | C5 | C6 | 1.5° | 0.0° |
| O3 | C4 | C5 | N7 | 179.7° | 180.0° |
| O3 | C4 | N9 | C8 | 178.8° | 179.9° |
| O3 | C4 | N9 | C1' | 6.5° | 0.0° |
| C4 | C5 | C6 | N7 | 177.5° | 180.0° |
| C4 | C5 | C6 | O6 | 179.3° | 0.0° |
| C4 | C5 | N7 | C8 | 1.1° | 0.0° |
| C5 | C4 | N9 | C8 | 4.2° | 0.3° |
| C5 | C4 | N9 | C1' | 176.5° | 179.8° |
| C5 | C4 | O3 | HO3 | 180.0° | 90.0° |
| N9 | C4 | C5 | C6 | 178.5° | 179.8° |
| N9 | C4 | C5 | N7 | 3.4° | 0.2° |
| C4 | N9 | C8 | N7 | 3.4° | 0.4° |
| C4 | N9 | C8 | C1' | 172.4° | 179.9° |
| C4 | N9 | C1' | C2' | 137.4° | 85.0° |
| C4 | N9 | C1' | O4' | 110.2° | 160.9° |
| N9 | C4 | O3 | HO3 | 3.5° | 90.3° |
| C4 | N9 | C8 | H8 | 176.6° | 179.9° |
| C4 | N9 | C1' | H1' | 17.1° | 37.9° |
| C6 | C5 | N7 | C8 | 179.0° | 180.0° |
| C5 | C6 | N1 | HN1 | 179.6° | 0.0° |
| C5 | C6 | N1 | HN1A | 0.4° | 179.7° |
| N7 | C5 | C6 | O6 | 1.7° | 180.0° |
| C5 | N7 | C8 | N9 | 1.3° | 0.2° |
| C5 | N7 | C8 | H8 | 178.7° | 180.0° |
| O6 | C6 | N1 | HN1 | 0.0° | 180.0° |
| O6 | C6 | N1 | HN1A | 180.0° | 0.3° |
| N7 | C8 | N9 | H8 | 180.0° | 179.8° |
| N7 | C8 | N9 | C1' | 175.8° | 179.8° |
| C8 | N9 | C1' | C2' | 51.7° | 94.8° |
| C8 | N9 | C1' | O4' | 60.7° | 19.2° |
| C8 | N9 | C1' | H1' | 172.0° | 142.2° |
| N9 | C1' | C2' | O4' | 113.0° | 118.5° |
| N9 | C1' | C2' | H1' | 119.8° | 122.9° |
| N9 | C1' | O4' | H1' | 118.8° | 123.0° |
| N9 | C1' | C2' | O2' | 92.6° | 86.3° |
| N9 | C1' | C2' | C3' | 141.6° | 155.5° |
| N9 | C1' | O4' | C4' | 166.7° | 158.6° |
| C1' | N9 | C8 | H8 | 4.2° | 0.0° |
| N9 | C1' | C2' | H2' | 23.6° | 37.3° |
| C2' | C1' | O4' | H1' | 119.2° | 118.6° |
| C1' | C2' | O2' | C3' | 116.3° | 112.7° |
| C1' | C2' | O2' | H2' | 125.6° | 123.7° |
| C1' | C2' | C3' | H2' | 125.6° | 118.2° |
| C1' | C2' | C3' | O3' | 116.4° | 97.8° |
| C1' | C2' | C3' | C4' | 4.3° | 20.9° |
| C2' | C1' | O4' | C4' | 44.7° | 40.1° |
| C1' | C2' | O2' | HO2' | 180.0° | 179.9° |
| C1' | C2' | C3' | H3' | 126.0° | 139.7° |
| O4' | C1' | C2' | O2' | 154.4° | 155.2° |
| O4' | C1' | C2' | C3' | 28.6° | 37.0° |
| C1' | O4' | C4' | C3' | 41.3° | 26.5° |
| C1' | O4' | C4' | C5' | 159.8° | 146.0° |
| O4' | C1' | C2' | H2' | 89.4° | 81.2° |
| C1' | O4' | C4' | H4' | 80.7° | 92.9° |
| O2' | C2' | C3' | H2' | 116.1° | 123.6° |
| O2' | C2' | C3' | O3' | 1.9° | 20.4° |
| O2' | C2' | C3' | C4' | 122.6° | 139.1° |
| O2' | C2' | C1' | H1' | 27.2° | 36.6° |
| O2' | C2' | C3' | H3' | 115.7° | 102.1° |
| C2' | C3' | O3' | C4' | 117.6° | 114.8° |
| C2' | C3' | O3' | H3' | 120.7° | 122.5° |
| C2' | C3' | C4' | H3' | 120.7° | 118.7° |
| C2' | C3' | C4' | O4' | 20.9° | 2.1° |
| C2' | C3' | C4' | C5' | 135.8° | 121.5° |
| C3' | C2' | C1' | H1' | 98.6° | 81.6° |
| C3' | C2' | O2' | HO2' | 63.7° | 67.4° |
| C2' | C3' | O3' | HO3' | 180.0° | 180.0° |
| C2' | C3' | C4' | H4' | 104.3° | 117.4° |
| O3' | C3' | C4' | H3' | 117.6° | 122.6° |
| O3' | C3' | C4' | O4' | 142.6° | 120.7° |
| O3' | C3' | C4' | C5' | 102.5° | 119.9° |
| O3' | C3' | C2' | H2' | 118.0° | 144.0° |
| O3' | C3' | C4' | H4' | 17.5° | 1.2° |
| C3' | C4' | O4' | C5' | 118.5° | 119.4° |
| C3' | C4' | O4' | H4' | 122.0° | 119.4° |
| C3' | C4' | C5' | H4' | 122.9° | 121.0° |
| C3' | C4' | C5' | O5' | 171.0° | 175.0° |
| C4' | C3' | C2' | H2' | 121.3° | 97.3° |
| C4' | C3' | O3' | HO3' | 62.4° | 65.2° |
| C3' | C4' | C5' | H5' | 51.0° | 55.0° |
| C3' | C4' | C5' | H5'A | 69.0° | 65.0° |
| O4' | C4' | C5' | H4' | 125.6° | 121.1° |
| O4' | C4' | C5' | O5' | 77.5° | 67.2° |
| C4' | O4' | C1' | H1' | 74.5° | 78.5° |
| O4' | C4' | C3' | H3' | 99.8° | 116.7° |
| O4' | C4' | C5' | H5' | 162.5° | 172.8° |
| O4' | C4' | C5' | H5'A | 42.5° | 52.9° |
| C4' | C5' | O5' | H5' | 120.0° | 120.0° |
| C4' | C5' | O5' | H5'A | 120.0° | 120.0° |
| C5' | C4' | C3' | H3' | 15.2° | 2.7° |
| C4' | C5' | H5' | H5'A | 116.4° | 120.0° |
| C4' | C5' | O5' | HO5' | 180.0° | 180.0° |
| O5' | C5' | C4' | H4' | 48.1° | 54.0° |
| O5' | C5' | H5' | H5'A | 116.5° | 120.0° |
| H1' | C1' | C2' | H2' | 143.3° | 160.2° |
| H2' | C2' | O2' | HO2' | 54.3° | 56.3° |
| H2' | C2' | C3' | H3' | 0.4° | 21.5° |
| H3' | C3' | O3' | HO3' | 59.3° | 57.5° |
| H3' | C3' | C4' | H4' | 135.1° | 123.8° |
| H4' | C4' | C5' | H5' | 71.9° | 66.1° |
| H4' | C4' | C5' | H5'A | 168.1° | 174.0° |
| H5' | C5' | O5' | HO5' | 60.0° | 60.0° |
| H5'A | C5' | O5' | HO5' | 60.0° | 60.0° |
