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MV1

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CC9sing1.51Å1.53Å
CN15sing1.35Å1.33Å
CO25doub1.21Å1.23Å
NC6sing1.35Å1.34Å
NC8sing1.47Å1.47Å
C1C2sing1.53Å1.53Å
C1C3sing1.53Å1.53Å
C1C4sing1.53Å1.53Å
C1C5sing1.53Å1.53Å
C2O2sing1.43Å1.43Å
C5C6sing1.51Å1.54Å
C5O5'sing1.43Å1.43Å
C6O6'doub1.21Å1.22Å
C8C9sing1.53Å1.53Å
N15C16sing1.46Å1.47Å
C16C17sing1.53Å1.53Å
C17C18sing1.53Å1.53Å
C18C19sing1.53Å1.53Å
C19C20sing1.53Å1.53Å
C20C21sing1.53Å1.53Å
C21C22sing1.53Å1.53Å
C22C23sing1.53Å1.53Å
C23C24sing1.53Å1.53Å
NHNsing0.97Å1.00Å
C2H2sing1.09Å1.10Å
C2H2Asing1.09Å1.10Å
O2HO2sing0.97Å0.95Å
C3H3sing1.09Å1.10Å
C3H3Asing1.09Å1.10Å
C3H3Bsing1.09Å1.10Å
C4H4sing1.09Å1.10Å
C4H4Asing1.09Å1.10Å
C4H4Bsing1.09Å1.10Å
C5H5sing1.09Å1.10Å
C8H8sing1.09Å1.10Å
C8H8Asing1.09Å1.10Å
C9H9sing1.09Å1.10Å
C9H9Asing1.09Å1.10Å
N15HN15sing0.97Å1.00Å
C16H16sing1.09Å1.10Å
C16H16Asing1.09Å1.10Å
C17H17sing1.09Å1.10Å
C17H17Asing1.09Å1.10Å
C18H18sing1.09Å1.10Å
C18H18Asing1.09Å1.10Å
C19H19sing1.09Å1.10Å
C19H19Asing1.09Å1.10Å
C20H20sing1.09Å1.10Å
C20H20Asing1.09Å1.10Å
C21H21sing1.09Å1.10Å
C21H21Asing1.09Å1.10Å
C22H22sing1.09Å1.10Å
C22H22Asing1.09Å1.10Å
C23H23sing1.09Å1.10Å
C23H23Asing1.09Å1.10Å
C24H24sing1.09Å1.10Å
C24H24Asing1.09Å1.10Å
C24H24Bsing1.09Å1.10Å
O5'HO5'sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C9CN15117.8°120.0°
C9CO25119.9°120.0°
CC9C8115.3°109.5°
CC9H9107.6°109.4°
CC9H9A107.6°109.4°
N15CO25122.1°120.0°
CN15C16119.1°120.0°
CN15HN15120.5°119.9°
C6NC8119.9°120.0°
NC6C5114.6°119.9°
NC6O6'123.3°120.0°
C6NHN120.0°120.1°
NC8C9109.6°109.5°
C8NHN120.1°120.0°
NC8H8109.4°109.5°
NC8H8A109.4°109.5°
C2C1C3109.7°109.5°
C2C1C4108.9°109.4°
C2C1C5109.6°109.4°
C1C2O2110.5°109.4°
C1C2H2109.1°109.5°
C1C2H2A109.1°109.5°
C3C1C4109.7°109.5°
C3C1C5111.3°109.5°
C1C3H3109.5°109.4°
C1C3H3A109.4°109.4°
C1C3H3B109.4°109.4°
C4C1C5107.6°109.5°
C1C4H4109.5°109.4°
C1C4H4A109.5°109.5°
C1C4H4B109.5°109.5°
C1C5C6113.9°109.5°
C1C5O5'108.8°109.5°
C1C5H5106.5°109.5°
O2C2H2109.1°109.5°
O2C2H2A109.1°109.5°
C2O2HO2109.5°114.0°
C6C5O5'108.2°109.5°
C5C6O6'122.1°120.0°
C6C5H5107.1°109.4°
O5'C5H5112.4°109.5°
C5O5'HO5'109.5°114.0°
C9C8H8109.4°109.5°
C9C8H8A109.4°109.4°
C8C9H9107.6°109.5°
C8C9H9A107.6°109.4°
N15C16C17110.2°109.5°
C16N15HN15120.4°120.0°
N15C16H16109.2°109.5°
N15C16H16A109.2°109.4°
C16C17C18109.5°109.5°
C17C16H16109.2°109.5°
C17C16H16A109.2°109.5°
C16C17H17109.5°109.5°
C16C17H17A109.5°109.5°
C17C18C19113.6°109.5°
C18C17H17109.5°109.5°
C18C17H17A109.5°109.4°
C17C18H18108.1°109.5°
C17C18H18A108.1°109.5°
C18C19C20114.8°109.5°
C19C18H18108.1°109.5°
C19C18H18A108.1°109.4°
C18C19H19107.7°109.5°
C18C19H19A107.7°109.4°
C19C20C21110.0°109.5°
C20C19H19107.7°109.5°
C20C19H19A107.8°109.4°
C19C20H20109.3°109.5°
C19C20H20A109.3°109.5°
C20C21C22115.7°109.5°
C21C20H20109.3°109.5°
C21C20H20A109.3°109.4°
C20C21H21107.5°109.5°
C20C21H21A107.4°109.4°
C21C22C23107.0°109.5°
C22C21H21107.5°109.5°
C22C21H21A107.5°109.5°
C21C22H22110.3°109.5°
C21C22H22A110.3°109.5°
C22C23C24113.5°109.5°
C23C22H22110.3°109.5°
C23C22H22A110.3°109.4°
C22C23H23108.1°109.5°
C22C23H23A108.2°109.4°
C24C23H23108.1°109.5°
C24C23H23A108.1°109.5°
C23C24H24109.5°109.5°
C23C24H24A109.4°109.5°
C23C24H24B109.4°109.5°
H2C2H2A109.8°109.5°
H3C3H3A109.5°109.5°
H3C3H3B109.5°109.5°
H3AC3H3B109.5°109.5°
H4C4H4A109.4°109.5°
H4C4H4B109.5°109.5°
H4AC4H4B109.5°109.4°
H8C8H8A109.5°109.5°
H9C9H9A111.3°109.5°
H16C16H16A109.7°109.5°
H17C17H17A109.5°109.5°
H18C18H18A110.8°109.5°
H19C19H19A111.2°109.5°
H20C20H20A109.7°109.5°
H21C21H21A111.4°109.4°
H22C22H22A108.6°109.4°
H23C23H23A110.8°109.5°
H24C24H24A109.5°109.5°
H24C24H24B109.5°109.4°
H24AC24H24B109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C9CN15O25175.2°179.8°
CC9C8N58.7°180.0°
CC9C8H9120.0°120.0°
CC9C8H9A120.0°120.0°
C9CN15C16178.5°180.0°
CC9C8H8178.7°60.0°
CC9C8H8A61.3°60.0°
CC9H9H9A117.6°120.0°
C9CN15HN151.6°0.1°
N15CC9C888.2°179.9°
CN15C16HN15180.0°179.9°
CN15C16C17150.9°180.0°
N15CC9H9151.8°60.0°
N15CC9H9A31.8°60.0°
CN15C16H1630.9°59.9°
CN15C16H16A89.1°60.1°
O25CC9C896.5°0.2°
O25CN15C163.3°0.1°
O25CC9H923.5°119.8°
O25CC9H9A143.5°120.2°
O25CN15HN15176.8°179.8°
C6NC8HN180.0°180.0°
NC6C5C1134.8°111.1°
NC6C5O6'179.5°179.9°
NC6C5O5'13.7°9.0°
C6NC8C9107.7°180.0°
NC6C5H5107.7°129.0°
C6NC8H8132.3°60.0°
C6NC8H8A12.3°60.0°
C8NC6C5179.0°174.9°
C8NC6O6'1.4°5.2°
NC8C9H8120.0°120.0°
NC8C9H8A120.0°120.0°
NC8H8H8A119.9°120.0°
NC8C9H9178.7°60.0°
NC8C9H9A61.4°60.0°
C2C1C3C4119.6°120.0°
C2C1C3C5121.4°120.0°
C2C1C4C5118.7°120.0°
C1C2O2H2120.0°120.0°
C1C2O2H2A120.0°120.0°
C2C1C5C6155.6°173.8°
C2C1C5O5'83.6°53.7°
C1C2H2H2A119.6°120.1°
C1C2O2HO2180.0°179.9°
C2C1C3H3180.0°64.1°
C2C1C3H3A60.0°175.9°
C2C1C3H3B60.0°55.9°
C2C1C4H4180.0°60.0°
C2C1C4H4A60.0°180.0°
C2C1C4H4B60.0°60.1°
C2C1C5H537.8°66.3°
C3C1C4C5121.2°120.0°
C3C1C2O248.3°60.0°
C3C1C5C634.2°66.2°
C3C1C5O5'154.9°173.8°
C3C1C2H271.7°60.0°
C3C1C2H2A168.3°180.0°
C1C3H3H3A120.0°119.9°
C1C3H3H3B120.0°120.0°
C1C3H3AH3B120.0°119.9°
C3C1C4H459.9°180.0°
C3C1C4H4A60.0°60.0°
C3C1C4H4B180.0°60.0°
C3C1C5H583.7°53.8°
C4C1C2O271.8°60.0°
C4C1C5C686.1°53.8°
C4C1C5O5'34.6°66.2°
C4C1C2H2168.2°180.0°
C4C1C2H2A48.2°60.0°
C4C1C3H360.5°55.9°
C4C1C3H3A179.6°64.1°
C4C1C3H3B59.6°175.9°
C1C4H4H4A120.0°120.0°
C1C4H4H4B120.0°120.0°
C1C4H4AH4B120.0°120.0°
C4C1C5H5156.0°173.8°
C5C1C2O2170.8°180.0°
C1C5C6O5'121.1°120.1°
C1C5C6H5117.5°120.0°
C1C5O5'H5117.7°120.0°
C1C5C6O6'45.7°68.9°
C5C1C2H250.8°60.1°
C5C1C2H2A69.2°60.0°
C5C1C3H358.6°175.9°
C5C1C3H3A61.4°55.9°
C5C1C3H3B178.6°64.1°
C5C1C4H461.3°60.0°
C5C1C4H4A178.7°60.0°
C5C1C4H4B58.7°180.0°
C1C5O5'HO5'180.0°60.0°
O2C2H2H2A119.6°120.0°
C6C5O5'H5118.1°119.9°
C5C6NHN0.9°5.1°
C6C5O5'HO5'55.8°60.0°
O5'C5C6O6'166.8°171.1°
O6'C6NHN178.6°174.8°
O6'C6C5H571.8°51.1°
C9C8NHN72.3°0.0°
C9C8H8H8A119.9°120.0°
C8C9H9H9A117.6°120.0°
N15C16C17H16120.0°120.0°
N15C16C17H16A120.0°119.9°
N15C16C17C18146.5°180.0°
N15C16H16H16A119.7°119.9°
N15C16C17H1793.5°60.0°
N15C16C17H17A26.5°60.1°
C16C17C18H17120.0°120.0°
C16C17C18H17A120.0°119.9°
C16C17C18C1954.1°180.0°
C17C16N15HN1529.2°0.1°
C17C16H16H16A119.6°120.0°
C16C17H17H17A120.0°120.0°
C16C17C18H1865.9°60.0°
C16C17C18H18A174.1°60.1°
C17C18C19H18120.0°120.1°
C17C18C19H18A120.0°119.9°
C17C18C19C2077.4°180.0°
C18C17C16H1626.5°60.0°
C18C17C16H16A93.4°60.1°
C18C17H17H17A120.0°120.0°
C17C18H18H18A118.3°120.0°
C17C18C19H1942.6°59.9°
C17C18C19H19A162.6°60.1°
C18C19C20H19120.0°120.1°
C18C19C20H19A120.0°119.9°
C18C19C20C2146.7°180.0°
C19C18C17H17174.1°59.9°
C19C18C17H17A65.9°60.1°
C19C18H18H18A118.3°119.9°
C18C19H19H19A117.8°120.0°
C18C19C20H20166.7°59.9°
C18C19C20H20A73.3°60.1°
C19C20C21H20120.0°120.1°
C19C20C21H20A120.0°120.0°
C19C20C21C22120.1°180.0°
C20C19C18H18162.6°59.9°
C20C19C18H18A42.6°60.1°
C20C19H19H19A117.8°120.0°
C19C20H20H20A119.8°120.0°
C19C20C21H21119.8°59.9°
C19C20C21H21A0.2°60.0°
C20C21C22H21120.0°120.0°
C20C21C22H21A120.0°120.0°
C20C21C22C23173.0°180.0°
C21C20C19H1973.3°60.0°
C21C20C19H19A166.7°60.1°
C21C20H20H20A119.8°119.9°
C20C21H21H21A117.4°119.9°
C20C21C22H2253.0°59.9°
C20C21C22H22A67.0°60.0°
C21C22C23H22120.0°120.1°
C21C22C23H22A120.0°120.0°
C21C22C23C24149.9°180.0°
C22C21C20H200.1°60.0°
C22C21C20H20A119.8°60.0°
C22C21H21H21A117.5°120.0°
C21C22H22H22A121.0°120.0°
C21C22C23H2390.2°60.0°
C21C22C23H23A29.9°60.0°
C22C23C24H23120.0°120.0°
C22C23C24H23A120.0°119.9°
C23C22C21H2166.9°60.0°
C23C22C21H21A53.1°60.0°
C23C22H22H22A121.0°119.9°
C22C23H23H23A118.4°119.9°
C22C23C24H24180.0°180.0°
C22C23C24H24A60.0°60.0°
C22C23C24H24B60.0°60.1°
C24C23C22H2229.9°59.9°
C24C23C22H22A90.1°60.0°
C24C23H23H23A118.4°120.0°
C23C24H24H24A120.0°120.0°
C23C24H24H24B120.0°120.0°
C23C24H24AH24B119.9°120.0°
HNNC8H847.7°120.0°
HNNC8H8A167.7°120.0°
H2C2O2HO260.0°60.0°
H2AC2O2HO260.0°60.1°
H3C3H3AH3B120.0°120.1°
H4C4H4AH4B120.0°120.1°
H5C5O5'HO5'62.3°180.0°
H8C8C9H961.3°60.0°
H8C8C9H9A58.7°180.0°
H8AC8C9H958.7°180.0°
H8AC8C9H9A178.7°60.0°
HN15N15C16H16149.2°120.0°
HN15N15C16H16A90.8°120.0°
H16C16C17H17146.5°180.0°
H16C16C17H17A93.5°60.0°
H16AC16C17H1726.6°60.0°
H16AC16C17H17A146.5°180.0°
H17C17C18H1854.1°180.0°
H17C17C18H18A65.9°60.0°
H17AC17C18H18174.1°60.0°
H17AC17C18H18A54.1°180.0°
H18C18C19H1977.4°180.0°
H18C18C19H19A42.6°60.0°
H18AC18C19H19162.6°60.0°
H18AC18C19H19A77.4°180.0°
H19C19C20H2046.7°180.0°
H19C19C20H20A166.7°60.0°
H19AC19C20H2073.3°60.0°
H19AC19C20H20A46.7°180.0°
H20C20C21H21120.2°180.0°
H20C20C21H21A119.8°60.1°
H20AC20C21H210.2°60.0°
H20AC20C21H21A120.2°180.0°
H21C21C22H22173.0°180.0°
H21C21C22H22A53.0°60.0°
H21AC21C22H2267.0°60.1°
H21AC21C22H22A173.1°180.0°
H22C22C23H23149.8°180.0°
H22C22C23H23A90.1°60.0°
H22AC22C23H2329.8°60.1°
H22AC22C23H23A149.9°180.0°
H23C23C24H2460.0°60.0°
H23C23C24H24A180.0°180.0°
H23C23C24H24B60.0°60.0°
H23AC23C24H2460.0°60.1°
H23AC23C24H24A60.0°60.0°
H23AC23C24H24B180.0°180.0°
H24C24H24AH24B120.1°120.0°

248335

PDB entries from 2026-01-28

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