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MQD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2sing1.53Å1.53Å
C1H1C1sing1.09Å1.10Å
C1H1C2sing1.09Å1.10Å
C1H1C3sing1.09Å1.10Å
C2O2sing1.43Å1.45Å
C2CMsing1.53Å1.54Å
C2C3sing1.53Å1.51Å
O2H2sing0.97Å0.99Å
CMO6sing1.43Å1.44Å
CMHMC1sing1.09Å1.10Å
CMHMC2sing1.09Å1.10Å
C3C4sing1.53Å1.54Å
C3H3C1sing1.09Å1.10Å
C3H3C2sing1.09Å1.10Å
C4O4sing1.43Å1.43Å
C4C5sing1.53Å1.53Å
C4H4sing1.09Å1.10Å
O4HAsing0.97Å0.99Å
C5H5C1sing1.09Å1.10Å
C5H5C2sing1.09Å1.10Å
C5H5C3sing1.09Å1.10Å
O6H6sing0.97Å0.99Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1H1C1109.5°109.4°
C2C1H1C2109.4°109.5°
C2C1H1C3109.4°109.5°
C1C2O2110.1°109.4°
C1C2CM111.6°109.4°
C1C2C3112.4°109.5°
H1C1C1H1C2109.5°109.4°
H1C1C1H1C3109.5°109.4°
H1C2C1H1C3109.5°109.5°
O2C2CM111.1°109.5°
O2C2C3104.1°109.5°
C2O2H2109.5°106.8°
CMC2C3107.3°109.5°
C2CMO6110.4°109.5°
C2CMHMC1109.2°109.5°
C2CMHMC2108.9°109.4°
C2C3C4113.7°109.5°
C2C3H3C1108.4°109.5°
C2C3H3C2107.0°109.5°
O6CMHMC1109.2°109.5°
O6CMHMC2108.9°109.5°
CMO6H6109.5°106.8°
HMC1CMHMC2110.1°109.5°
C4C3H3C1108.4°109.5°
C4C3H3C2107.0°109.4°
C3C4O4110.3°109.5°
C3C4C5107.3°109.5°
C3C4H4110.2°109.4°
H3C1C3H3C2112.4°109.4°
O4C4C5108.7°109.5°
O4C4H4108.7°109.4°
C4O4HA109.5°106.7°
C5C4H4111.7°109.4°
C4C5H5C1109.5°109.5°
C4C5H5C2109.5°109.5°
C4C5H5C3109.5°109.5°
H5C1C5H5C2109.4°109.4°
H5C1C5H5C3109.5°109.4°
H5C2C5H5C3109.5°109.6°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1H1C1H1C2120.0°120.0°
C2C1H1C1H1C3120.0°120.0°
C2C1H1C2H1C3119.9°120.1°
C1C2O2CM124.2°119.9°
C1C2O2C3120.6°120.0°
C1C2CMC3123.5°120.0°
C1C2O2H2156.5°180.0°
C1C2CMO6153.7°60.0°
C1C2CMHMC133.5°60.0°
C1C2CMHMC286.7°180.0°
C1C2C3C479.5°60.0°
C1C2C3H3C141.1°60.0°
C1C2C3H3C2162.6°180.0°
H1C1C1H1C2H1C3120.0°119.9°
H1C1C1C2O256.5°180.0°
H1C1C1C2CM179.6°60.0°
H1C1C1C2C359.0°60.0°
H1C2C1C2O2176.5°60.0°
H1C2C1C2CM59.6°59.9°
H1C2C1C2C361.0°180.0°
H1C3C1C2O263.5°60.1°
H1C3C1C2CM60.4°180.0°
H1C3C1C2C3179.1°59.9°
O2C2CMC3113.2°120.1°
O2C2CMO630.4°60.0°
O2C2CMHMC189.8°180.0°
O2C2CMHMC2149.9°60.0°
O2C2C3C4161.4°60.0°
O2C2C3H3C178.0°180.0°
O2C2C3H3C243.4°60.0°
CMC2O2H232.3°60.1°
C2CMO6HMC1120.2°120.0°
C2CMO6HMC2119.6°119.9°
C2CMHMC1HMC2119.6°119.9°
CMC2C3C443.6°180.0°
CMC2C3H3C1164.2°60.0°
CMC2C3H3C274.4°60.0°
C2CMO6H616.6°180.0°
C3C2O2H282.9°60.0°
C3C2CMO682.8°180.0°
C3C2CMHMC1157.0°60.0°
C3C2CMHMC236.8°60.0°
C2C3C4H3C1120.6°120.0°
C2C3C4H3C2117.9°120.0°
C2C3H3C1H3C2118.1°120.0°
C2C3C4O470.0°59.9°
C2C3C4C5171.8°180.0°
C2C3C4H450.1°60.0°
O6CMHMC1HMC2119.6°120.0°
HMC1CMO6H6136.7°60.0°
HMC2CMO6H6103.0°60.0°
C4C3H3C1H3C2118.1°119.9°
C3C4O4C5117.3°120.1°
C3C4O4H4120.9°120.0°
C3C4C5H4120.8°120.0°
C3C4O4HA62.9°60.1°
C3C4C5H5C182.6°180.0°
C3C4C5H5C2157.4°60.1°
C3C4C5H5C337.4°60.0°
H3C1C3C4O450.6°180.0°
H3C1C3C4C567.6°59.9°
H3C1C3C4H4170.7°60.0°
H3C2C3C4O4172.1°60.1°
H3C2C3C4C553.9°60.0°
H3C2C3C4H467.9°179.9°
O4C4C5H4120.0°119.9°
O4C4C5H5C1158.2°59.9°
O4C4C5H5C238.2°60.0°
O4C4C5H5C381.8°179.9°
C5C4O4HA54.5°60.0°
C4C5H5C1H5C2120.0°120.0°
C4C5H5C1H5C3120.0°120.0°
C4C5H5C2H5C3120.0°120.0°
H4C4O4HA176.2°180.0°
H4C4C5H5C138.2°60.0°
H4C4C5H5C281.7°180.0°
H4C4C5H5C3158.3°59.9°
H5C1C5H5C2H5C3120.0°120.0°

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PDB entries from 2026-02-04

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