MPQ
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| N | CM | sing | 1.47Å | 1.45Å | |
| N | CA | sing | 1.47Å | 1.43Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| CM | HM1 | sing | 1.09Å | 1.10Å | |
| CM | HM2 | sing | 1.09Å | 1.10Å | |
| CM | HM3 | sing | 1.09Å | 1.10Å | |
| CA | CG | sing | 1.51Å | 1.48Å | |
| CA | C | sing | 1.51Å | 1.50Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| CG | CD1 | doub | 1.38Å | 1.36Å | Aromatic |
| CG | CD2 | sing | 1.38Å | 1.37Å | Aromatic |
| CD1 | CE1 | sing | 1.38Å | 1.35Å | Aromatic |
| CD1 | HD11 | sing | 1.08Å | 1.08Å | |
| CD2 | CE2 | doub | 1.38Å | 1.35Å | Aromatic |
| CD2 | HD21 | sing | 1.08Å | 1.08Å | |
| CE1 | CZ | doub | 1.38Å | 1.35Å | Aromatic |
| CE1 | HE11 | sing | 1.08Å | 1.08Å | |
| CE2 | CZ | sing | 1.38Å | 1.34Å | Aromatic |
| CE2 | HE21 | sing | 1.08Å | 1.08Å | |
| CZ | HZ1 | sing | 1.08Å | 1.08Å | |
| C | O | doub | 1.21Å | 1.21Å | |
| C | OXT | sing | 1.34Å | 1.34Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| CM | N | CA | 120.5° | 111.0° |
| CM | N | H | 105.9° | 111.0° |
| N | CM | HM1 | 109.5° | 109.4° |
| N | CM | HM2 | 109.5° | 109.5° |
| N | CM | HM3 | 109.5° | 109.4° |
| CA | N | H | 105.9° | 111.0° |
| N | CA | CG | 112.3° | 109.5° |
| N | CA | C | 108.8° | 109.4° |
| N | CA | HA | 107.1° | 109.5° |
| HM1 | CM | HM2 | 109.5° | 109.5° |
| HM1 | CM | HM3 | 109.5° | 109.5° |
| HM2 | CM | HM3 | 109.5° | 109.5° |
| CG | CA | C | 106.3° | 109.5° |
| CG | CA | HA | 109.5° | 109.5° |
| CA | CG | CD1 | 120.8° | 120.0° |
| CA | CG | CD2 | 120.7° | 120.0° |
| C | CA | HA | 112.9° | 109.5° |
| CA | C | O | 118.2° | 120.0° |
| CA | C | OXT | 118.2° | 120.0° |
| CD1 | CG | CD2 | 118.1° | 120.0° |
| CG | CD1 | CE1 | 120.4° | 120.0° |
| CG | CD1 | HD11 | 119.8° | 120.0° |
| CG | CD2 | CE2 | 121.1° | 120.0° |
| CG | CD2 | HD21 | 119.5° | 120.0° |
| CE1 | CD1 | HD11 | 119.8° | 120.0° |
| CD1 | CE1 | CZ | 120.6° | 120.0° |
| CD1 | CE1 | HE11 | 119.7° | 120.0° |
| CE2 | CD2 | HD21 | 119.4° | 120.0° |
| CD2 | CE2 | CZ | 119.7° | 119.9° |
| CD2 | CE2 | HE21 | 120.1° | 120.0° |
| CZ | CE1 | HE11 | 119.7° | 119.9° |
| CE1 | CZ | CE2 | 120.1° | 120.0° |
| CE1 | CZ | HZ1 | 119.9° | 120.1° |
| CZ | CE2 | HE21 | 120.1° | 120.0° |
| CE2 | CZ | HZ1 | 120.0° | 119.9° |
| O | C | OXT | 123.6° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| CM | N | CA | H | 120.0° | 124.0° |
| N | CM | HM1 | HM2 | 120.0° | 120.0° |
| N | CM | HM1 | HM3 | 120.0° | 119.9° |
| N | CM | HM2 | HM3 | 120.0° | 120.0° |
| CM | N | CA | CG | 4.8° | 154.5° |
| CM | N | CA | C | 112.6° | 85.5° |
| CM | N | CA | HA | 125.0° | 34.4° |
| CA | N | CM | HM1 | 180.0° | 64.7° |
| CA | N | CM | HM2 | 60.0° | 55.3° |
| CA | N | CM | HM3 | 60.0° | 175.4° |
| N | CA | CG | C | 118.9° | 119.9° |
| N | CA | CG | HA | 118.8° | 120.1° |
| N | CA | C | HA | 118.7° | 120.0° |
| N | CA | CG | CD1 | 73.1° | 134.4° |
| N | CA | CG | CD2 | 113.6° | 45.3° |
| N | CA | C | O | 23.8° | 26.2° |
| N | CA | C | OXT | 154.2° | 153.9° |
| H | N | CM | HM1 | 60.0° | 59.3° |
| H | N | CM | HM2 | 60.0° | 179.3° |
| H | N | CM | HM3 | 180.0° | 60.7° |
| H | N | CA | CG | 124.8° | 30.6° |
| H | N | CA | C | 7.4° | 150.5° |
| H | N | CA | HA | 115.0° | 89.5° |
| HM1 | CM | HM2 | HM3 | 120.0° | 120.0° |
| CG | CA | C | HA | 120.1° | 120.0° |
| CA | CG | CD1 | CD2 | 173.4° | 179.7° |
| CA | CG | CD1 | CE1 | 172.4° | 179.9° |
| CA | CG | CD1 | HD11 | 7.6° | 0.1° |
| CA | CG | CD2 | CE2 | 172.4° | 180.0° |
| CA | CG | CD2 | HD21 | 7.6° | 0.0° |
| CG | CA | C | O | 97.3° | 93.8° |
| CG | CA | C | OXT | 84.6° | 86.1° |
| C | CA | CG | CD1 | 168.0° | 105.7° |
| C | CA | CG | CD2 | 5.3° | 74.6° |
| CA | C | O | OXT | 177.9° | 179.9° |
| CA | C | OXT | HXT | 178.0° | 179.9° |
| HA | CA | CG | CD1 | 45.7° | 14.3° |
| HA | CA | CG | CD2 | 127.6° | 165.4° |
| HA | CA | C | O | 142.6° | 146.2° |
| HA | CA | C | OXT | 35.5° | 33.9° |
| CG | CD1 | CE1 | HD11 | 180.0° | 180.0° |
| CD1 | CG | CD2 | CE2 | 1.0° | 0.3° |
| CD1 | CG | CD2 | HD21 | 179.0° | 179.7° |
| CG | CD1 | CE1 | CZ | 0.2° | 0.0° |
| CG | CD1 | CE1 | HE11 | 179.8° | 179.9° |
| CD2 | CG | CD1 | CE1 | 1.0° | 0.3° |
| CD2 | CG | CD1 | HD11 | 179.0° | 179.8° |
| CG | CD2 | CE2 | HD21 | 180.0° | 180.0° |
| CG | CD2 | CE2 | CZ | 0.3° | 0.0° |
| CG | CD2 | CE2 | HE21 | 179.7° | 180.0° |
| CD1 | CE1 | CZ | HE11 | 180.0° | 179.9° |
| CD1 | CE1 | CZ | CE2 | 0.5° | 0.2° |
| CD1 | CE1 | CZ | HZ1 | 179.5° | 179.9° |
| HD11 | CD1 | CE1 | CZ | 179.8° | 180.0° |
| HD11 | CD1 | CE1 | HE11 | 0.2° | 0.1° |
| CD2 | CE2 | CZ | CE1 | 0.5° | 0.2° |
| CD2 | CE2 | CZ | HE21 | 180.0° | 179.9° |
| CD2 | CE2 | CZ | HZ1 | 179.5° | 179.9° |
| HD21 | CD2 | CE2 | CZ | 179.8° | 180.0° |
| HD21 | CD2 | CE2 | HE21 | 0.2° | 0.0° |
| CE1 | CZ | CE2 | HZ1 | 180.0° | 179.8° |
| CE1 | CZ | CE2 | HE21 | 179.5° | 179.7° |
| HE11 | CE1 | CZ | CE2 | 179.5° | 179.8° |
| HE11 | CE1 | CZ | HZ1 | 0.6° | 0.0° |
| HE21 | CE2 | CZ | HZ1 | 0.5° | 0.1° |
| O | C | OXT | HXT | 0.0° | 0.0° |
