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MP5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C1C2doub1.40Å1.42ÅAromatic
C1C3sing1.51Å1.46Å
C1C6sing1.38Å1.41ÅAromatic
C2N1sing1.39Å1.37Å
C2N2sing1.33Å1.40ÅAromatic
C3O1sing1.43Å1.37Å
C3H31sing1.09Å1.12Å
C3H32sing1.09Å1.12Å
N1HN11sing0.97Å1.02Å
N1HN12sing0.97Å1.02Å
N2C4doub1.32Å1.36ÅAromatic
C4C5sing1.51Å1.53Å
C4N3sing1.32Å1.41ÅAromatic
C5H51sing1.09Å1.11Å
C5H52sing1.09Å1.11Å
C5H53sing1.09Å1.12Å
N3C6doub1.33Å1.39ÅAromatic
C6H6sing1.08Å1.10Å
O1P1sing1.61Å1.61Å
P1O2sing1.61Å1.59Å
P1O3doub1.48Å1.62Å
P1O4sing1.61Å1.41Å
O2HO2sing0.97Å0.95Å
O4HO4sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2C1C3121.0°120.8°
C2C1C6117.3°118.3°
C1C2N1121.1°120.5°
C1C2N2120.4°119.0°
C3C1C6121.8°120.9°
C1C3O1113.3°109.5°
C1C3H31110.8°109.5°
C1C3H32110.8°109.5°
C1C6N3123.4°119.2°
C1C6H6119.0°120.4°
N1C2N2118.4°120.5°
C2N1HN11108.1°120.0°
C2N1HN12121.1°120.0°
C2N2C4119.5°120.7°
O1C3H31110.8°109.4°
O1C3H32110.8°109.5°
C3O1P1118.6°106.8°
H31C3H3299.5°109.4°
HN11N1HN12108.1°120.0°
N2C4C5117.7°119.1°
N2C4N3123.1°121.9°
C5C4N3119.1°119.1°
C4C5H51109.3°109.5°
C4C5H52117.7°109.5°
C4C5H53109.2°109.4°
C4N3C6116.1°121.0°
H51C5H52109.2°109.5°
H51C5H53100.9°109.4°
H52C5H53109.2°109.5°
N3C6H6117.6°120.4°
O1P1O293.2°109.5°
O1P1O3113.4°109.5°
O1P1O4114.1°109.5°
O2P1O3100.3°109.4°
O2P1O4117.9°109.5°
P1O2HO293.2°106.8°
O3P1O4115.3°109.5°
P1O4HO4114.1°106.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2C1C3C6178.9°180.0°
C1C2N1N2179.6°179.7°
C2C1C3O186.5°180.0°
C2C1C3H3138.7°60.0°
C2C1C3H32148.2°60.0°
C1C2N1HN1154.7°180.0°
C1C2N1HN12180.0°0.0°
C1C2N2C40.7°0.6°
C2C1C6N31.8°0.0°
C2C1C6H6178.2°180.0°
C3C1C2N13.7°0.0°
C3C1C2N2175.9°179.7°
C1C3O1H31125.2°120.0°
C1C3O1H32125.3°120.0°
C1C3H31H32116.7°120.0°
C3C1C6N3177.1°180.0°
C3C1C6H62.9°0.0°
C1C3O1P1113.0°180.0°
C6C1C2N1177.4°180.0°
C6C1C2N23.1°0.3°
C6C1C3O194.6°0.1°
C6C1C3H31140.2°120.1°
C6C1C3H3230.7°120.0°
C1C6N3C41.6°0.0°
C1C6N3H6180.0°180.0°
C2N1HN11HN12132.7°180.0°
N1C2N2C4179.7°179.8°
N2C2N1HN11124.9°0.3°
N2C2N1HN120.4°179.7°
C2N2C4C5172.6°179.7°
C2N2C4N33.1°0.5°
O1C3H31H32116.7°120.0°
C3O1P1O2141.6°180.0°
C3O1P1O338.9°60.0°
C3O1P1O495.9°60.0°
H31C3O1P112.2°60.0°
H32C3O1P1121.7°60.0°
N2C4C5N3175.8°179.8°
N2C4C5H5154.7°90.3°
N2C4C5H52180.0°29.7°
N2C4C5H5354.7°149.7°
N2C4N3C64.2°0.2°
C4C5H51H52130.0°120.0°
C4C5H51H53115.0°119.9°
C4C5H52H53125.2°120.0°
C5C4N3C6171.4°180.0°
N3C4C5H51121.1°89.9°
N3C4C5H524.2°150.1°
N3C4C5H53129.4°30.0°
C4N3C6H6178.4°180.0°
H51C5H52H53109.4°120.0°
O1P1O2O3114.5°120.0°
O1P1O2O4119.5°120.0°
O1P1O3O4134.2°120.0°
O1P1O2HO2180.0°180.0°
O1P1O4HO4180.0°60.0°
O2P1O3O4127.7°120.0°
O2P1O4HO472.2°60.0°
O3P1O2HO265.5°60.0°
O3P1O4HO446.1°180.0°
O4P1O2HO260.5°60.0°

227111

PDB entries from 2024-11-06

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