MNP
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.51Å | 1.53Å | |
C1 | O1 | doub | 1.21Å | 1.22Å | |
C1 | O2 | sing | 1.34Å | 1.21Å | |
C2 | C1' | sing | 1.51Å | 1.49Å | |
C2 | H21 | sing | 1.09Å | 1.12Å | |
C2 | H22 | sing | 1.09Å | 1.11Å | |
C1' | C2' | doub | 1.38Å | 1.37Å | Aromatic |
C1' | C6' | sing | 1.39Å | 1.39Å | Aromatic |
C2' | C3' | sing | 1.41Å | 1.37Å | Aromatic |
C2' | H2' | sing | 1.08Å | 1.10Å | |
C3' | N3' | sing | 1.34Å | 1.41Å | |
C3' | C4' | doub | 1.40Å | 1.38Å | Aromatic |
N3' | O3' | sing | 1.22Å | 1.41Å | |
N3' | O4' | doub | 1.22Å | 1.39Å | |
C4' | C5' | sing | 1.38Å | 1.36Å | Aromatic |
C4' | H4' | sing | 1.08Å | 1.10Å | |
C5' | C6' | doub | 1.38Å | 1.40Å | Aromatic |
C5' | H5' | sing | 1.08Å | 1.10Å | |
C6' | H6' | sing | 1.08Å | 1.10Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | O1 | 115.8° | 120.0° |
C2 | C1 | O2 | 131.2° | 120.0° |
C1 | C2 | C1' | 116.1° | 109.5° |
C1 | C2 | H21 | 109.8° | 109.4° |
C1 | C2 | H22 | 109.8° | 109.5° |
O1 | C1 | O2 | 112.8° | 120.0° |
C1 | O2 | HO2 | 131.3° | 120.0° |
C1' | C2 | H21 | 109.7° | 109.5° |
C1' | C2 | H22 | 109.8° | 109.5° |
C2 | C1' | C2' | 115.2° | 119.9° |
C2 | C1' | C6' | 124.9° | 119.9° |
H21 | C2 | H22 | 100.4° | 109.5° |
C2' | C1' | C6' | 119.9° | 120.2° |
C1' | C2' | C3' | 115.3° | 119.8° |
C1' | C2' | H2' | 122.5° | 120.1° |
C1' | C6' | C5' | 121.8° | 120.5° |
C1' | C6' | H6' | 118.8° | 119.8° |
C3' | C2' | H2' | 122.1° | 120.1° |
C2' | C3' | N3' | 119.5° | 120.3° |
C2' | C3' | C4' | 127.6° | 119.5° |
N3' | C3' | C4' | 112.9° | 120.2° |
C3' | N3' | O3' | 101.9° | 120.0° |
C3' | N3' | O4' | 129.5° | 120.0° |
C3' | C4' | C5' | 116.0° | 119.8° |
C3' | C4' | H4' | 122.8° | 120.1° |
O3' | N3' | O4' | 128.6° | 120.0° |
C5' | C4' | H4' | 121.3° | 120.1° |
C4' | C5' | C6' | 119.3° | 120.2° |
C4' | C5' | H5' | 118.9° | 119.9° |
C6' | C5' | H5' | 121.8° | 119.9° |
C5' | C6' | H6' | 119.4° | 119.7° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | O1 | O2 | 175.9° | 180.0° |
C1 | C2 | C1' | H21 | 125.3° | 119.9° |
C1 | C2 | C1' | H22 | 125.3° | 120.1° |
C1 | C2 | H21 | H22 | 115.6° | 120.0° |
C1 | C2 | C1' | C2' | 70.5° | 90.3° |
C1 | C2 | C1' | C6' | 110.3° | 89.9° |
C2 | C1 | O2 | HO2 | 180.0° | 180.0° |
O1 | C1 | C2 | C1' | 140.6° | 0.0° |
O1 | C1 | C2 | H21 | 94.2° | 120.0° |
O1 | C1 | C2 | H22 | 15.3° | 120.0° |
O1 | C1 | O2 | HO2 | 4.9° | 0.0° |
O2 | C1 | C2 | C1' | 34.3° | 180.0° |
O2 | C1 | C2 | H21 | 90.9° | 60.0° |
O2 | C1 | C2 | H22 | 159.6° | 60.0° |
C1' | C2 | H21 | H22 | 115.6° | 120.0° |
C2 | C1' | C2' | C6' | 179.3° | 179.7° |
C2 | C1' | C2' | C3' | 179.4° | 179.8° |
C2 | C1' | C2' | H2' | 0.5° | 0.3° |
C2 | C1' | C6' | C5' | 177.7° | 179.9° |
C2 | C1' | C6' | H6' | 2.2° | 0.0° |
H21 | C2 | C1' | C2' | 54.8° | 149.7° |
H21 | C2 | C1' | C6' | 124.5° | 30.0° |
H22 | C2 | C1' | C2' | 164.3° | 29.7° |
H22 | C2 | C1' | C6' | 15.0° | 150.0° |
C1' | C2' | C3' | H2' | 180.0° | 179.5° |
C1' | C2' | C3' | N3' | 177.6° | 179.8° |
C1' | C2' | C3' | C4' | 0.5° | 0.6° |
C2' | C1' | C6' | C5' | 1.5° | 0.2° |
C2' | C1' | C6' | H6' | 178.5° | 179.7° |
C6' | C1' | C2' | C3' | 0.1° | 0.5° |
C6' | C1' | C2' | H2' | 179.8° | 180.0° |
C1' | C6' | C5' | C4' | 2.8° | 0.0° |
C1' | C6' | C5' | H6' | 180.0° | 179.9° |
C1' | C6' | C5' | H5' | 177.2° | 180.0° |
C2' | C3' | N3' | C4' | 177.5° | 179.6° |
C2' | C3' | N3' | O3' | 178.6° | 179.7° |
C2' | C3' | N3' | O4' | 2.5° | 0.4° |
C2' | C3' | C4' | C5' | 0.8° | 0.4° |
C2' | C3' | C4' | H4' | 179.3° | 179.8° |
H2' | C2' | C3' | N3' | 2.3° | 0.3° |
H2' | C2' | C3' | C4' | 179.5° | 179.9° |
C3' | N3' | O3' | O4' | 178.9° | 179.9° |
N3' | C3' | C4' | C5' | 176.5° | 180.0° |
N3' | C3' | C4' | H4' | 3.4° | 0.2° |
C4' | C3' | N3' | O3' | 1.1° | 0.1° |
C4' | C3' | N3' | O4' | 180.0° | 180.0° |
C3' | C4' | C5' | H4' | 180.0° | 179.8° |
C3' | C4' | C5' | C6' | 2.3° | 0.0° |
C3' | C4' | C5' | H5' | 177.7° | 179.9° |
C4' | C5' | C6' | H5' | 180.0° | 180.0° |
C4' | C5' | C6' | H6' | 177.2° | 180.0° |
H4' | C4' | C5' | C6' | 177.7° | 179.9° |
H4' | C4' | C5' | H5' | 2.3° | 0.1° |
H5' | C5' | C6' | H6' | 2.8° | 0.1° |