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MJL

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O4C4doub1.22Å1.22Å
C4C5sing1.42Å1.31Å
C4N3sing1.35Å1.33Å
C5C6doub1.35Å1.31Å
C6N1sing1.37Å1.35Å
N3C2sing1.35Å1.34Å
O1APAdoub1.48Å1.52Å
C2N1sing1.34Å1.43Å
C2O2doub1.22Å1.24Å
N1C1Csing1.47Å1.45Å
O2CC2Csing1.43Å1.43Å
C2CC1Csing1.54Å1.50Å
C2CC3Csing1.55Å1.53Å
O1BPBdoub1.48Å1.46Å
C8'C7'sing1.51Å1.54Å
O2APAsing1.61Å1.50Å
C1CO4Csing1.44Å1.45Å
PAO3Asing1.61Å1.56Å
PAO5Csing1.61Å1.58Å
O3APBsing1.61Å1.59Å
O4CC4Csing1.44Å1.46Å
C5CO5Csing1.43Å1.42Å
C5CC4Csing1.53Å1.50Å
C3CC4Csing1.54Å1.53Å
C3CO3Csing1.43Å1.42Å
PBO2Bsing1.61Å1.50Å
PBO3Bsing1.61Å1.58Å
C7'N2'sing1.35Å1.33Å
C7'O7'doub1.21Å1.21Å
N2'C2'sing1.46Å1.46Å
O3BC1'sing1.43Å1.42Å
O43C41doub1.21Å1.21Å
C1'C2'sing1.53Å1.53Å
C1'O5'sing1.43Å1.42Å
C2'C3'sing1.53Å1.51Å
C41C42sing1.51Å1.51Å
C41N3'sing1.35Å1.37Å
C3'N3'sing1.47Å1.43Å
C3'C4'sing1.53Å1.49Å
O5'C5'sing1.43Å1.45Å
C5'C4'sing1.53Å1.54Å
C5'C6'sing1.51Å1.50Å
C4'O4'sing1.43Å1.43Å
C6'O'Qdoub1.21Å1.27Å
C6'O'Psing1.34Å1.25Å
N3H1sing0.97Å1.00Å
C5H2sing1.08Å1.08Å
C6H3sing1.08Å1.08Å
O'PH4sing0.97Å0.95Å
C1'H5sing1.09Å1.10Å
C1CH6sing1.09Å1.10Å
C2'H7sing1.09Å1.10Å
N2'H8sing0.97Å1.00Å
O2AH9sing0.97Å0.95Å
O2BH10sing0.97Å0.95Å
C2CH11sing1.09Å1.10Å
O2CH12sing0.97Å0.95Å
C3'H13sing1.09Å1.10Å
N3'H14sing0.97Å1.00Å
C3CH15sing1.09Å1.10Å
O3CH16sing0.97Å0.95Å
C4'H17sing1.09Å1.10Å
O4'H18sing0.97Å0.95Å
C4CH19sing1.09Å1.10Å
C5'H20sing1.09Å1.10Å
C5CH21sing1.09Å1.10Å
C5CH22sing1.09Å1.10Å
C8'H23sing1.09Å1.10Å
C8'H24sing1.09Å1.10Å
C8'H25sing1.09Å1.10Å
C42H26sing1.09Å1.10Å
C42H27sing1.09Å1.10Å
C42H28sing1.09Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O4C4C5123.0°120.3°
O4C4N3115.7°120.3°
C5C4N3121.3°119.4°
C4C5C6122.8°119.1°
C4C5H2118.6°120.5°
C4N3C2118.5°120.2°
C4N3H1120.8°119.9°
C5C6N1120.2°119.7°
C6C5H2118.6°120.4°
C5C6H3119.9°120.1°
C6N1C2116.7°120.6°
C6N1C1C124.0°119.7°
N1C6H3119.9°120.2°
N3C2N1120.4°121.0°
N3C2O2117.5°119.5°
C2N3H1120.8°119.9°
O1APAO2A110.0°109.4°
O1APAO3A110.7°109.5°
O1APAO5C110.6°109.5°
N1C2O2122.2°119.5°
C2N1C1C119.2°119.7°
N1C1CC2C115.9°110.4°
N1C1CO4C108.1°110.3°
N1C1CH6109.2°110.3°
O2CC2CC1C114.9°110.5°
O2CC2CC3C111.2°110.5°
O2CC2CH11110.0°110.6°
C2CO2CH12109.5°114.0°
C1CC2CC3C103.1°104.0°
C2CC1CO4C105.7°104.8°
C2CC1CH6108.5°110.5°
C1CC2CH11108.9°110.6°
C2CC3CC4C104.3°104.0°
C2CC3CO3C113.3°110.5°
C3CC2CH11108.5°110.6°
C2CC3CH15108.9°110.5°
O1BPBO3A106.3°109.4°
O1BPBO2B114.3°109.5°
O1BPBO3B110.0°109.5°
C8'C7'N2'118.1°120.0°
C8'C7'O7'120.2°120.0°
C7'C8'H23109.5°109.4°
C7'C8'H24109.4°109.5°
C7'C8'H25109.4°109.4°
O2APAO3A111.1°109.4°
O2APAO5C109.4°109.5°
PAO2AH9109.5°114.0°
C1CO4CC4C108.7°105.3°
O4CC1CH6109.1°110.4°
O3APAO5C105.0°109.5°
PAO3APB120.2°134.0°
PAO5CC5C119.9°123.0°
O3APBO2B111.7°109.5°
O3APBO3B107.0°109.4°
O4CC4CC5C110.7°110.5°
O4CC4CC3C106.6°104.8°
O4CC4CH19111.5°110.4°
O5CC5CC4C112.0°109.5°
O5CC5CH21108.8°109.4°
O5CC5CH22108.8°109.5°
C5CC4CC3C106.4°110.4°
C5CC4CH19110.9°110.3°
C4CC5CH21108.8°109.5°
C4CC5CH22108.8°109.5°
C4CC3CO3C110.5°110.6°
C4CC3CH15109.0°110.5°
C3CC4CH19110.5°110.3°
O3CC3CH15110.6°110.5°
C3CO3CH16109.5°114.0°
O2BPBO3B107.3°109.5°
PBO2BH10109.5°114.0°
PBO3BC1'125.3°122.9°
N2'C7'O7'121.7°120.0°
C7'N2'C2'125.2°120.0°
C7'N2'H8117.4°120.0°
N2'C2'C1'111.1°109.6°
N2'C2'C3'112.0°109.5°
N2'C2'H7108.8°109.6°
C2'N2'H8117.4°119.9°
O3BC1'C2'109.9°109.4°
O3BC1'O5'105.6°109.5°
O3BC1'H5112.0°109.5°
O43C41C42118.8°120.0°
O43C41N3'122.7°120.1°
C2'C1'O5'106.7°109.4°
C1'C2'C3'108.7°109.2°
C2'C1'H5110.4°109.5°
C1'C2'H7107.9°109.5°
C1'O5'C5'111.0°114.1°
O5'C1'H5112.0°109.5°
C2'C3'N3'111.1°109.5°
C2'C3'C4'107.6°109.0°
C3'C2'H7108.2°109.5°
C2'C3'H13109.3°109.5°
C42C41N3'118.5°120.0°
C41C42H26109.5°109.5°
C41C42H27109.5°109.5°
C41C42H28109.4°109.5°
C41N3'C3'123.8°119.9°
C41N3'H14118.1°120.1°
N3'C3'C4'108.8°109.6°
N3'C3'H13110.4°109.6°
C3'N3'H14118.1°120.0°
C3'C4'C5'112.5°109.2°
C3'C4'O4'105.6°109.5°
C4'C3'H13109.6°109.6°
C3'C4'H17109.1°109.5°
O5'C5'C4'112.4°109.4°
O5'C5'C6'109.6°109.5°
O5'C5'H20109.4°109.5°
C4'C5'C6'108.4°109.5°
C5'C4'O4'111.3°109.6°
C5'C4'H17108.5°109.6°
C4'C5'H20108.2°109.5°
C5'C6'O'Q118.3°120.0°
C5'C6'O'P118.6°120.0°
C6'C5'H20108.7°109.5°
O4'C4'H17109.9°109.5°
C4'O4'H18109.5°114.0°
O'QC6'O'P123.0°120.0°
C6'O'PH4109.5°117.0°
H21C5CH22109.5°109.5°
H23C8'H24109.5°109.5°
H23C8'H25109.5°109.5°
H24C8'H25109.5°109.5°
H26C42H27109.5°109.4°
H26C42H28109.5°109.5°
H27C42H28109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O4C4C5N3177.6°179.7°
O4C4C5C6177.7°180.0°
O4C4N3C2178.8°180.0°
O4C4N3H11.2°0.0°
O4C4C5H22.3°0.3°
C4C5C6H2180.0°179.7°
C4C5C6N11.8°0.0°
C5C4N3C21.1°0.3°
C5C4N3H1178.9°179.7°
C4C5C6H3178.2°179.9°
N3C4C5C60.1°0.3°
C4N3C2H1180.0°180.0°
C4N3C2N10.2°0.1°
C4N3C2O2179.9°180.0°
N3C4C5H2179.9°180.0°
C5C6N1H3180.0°179.9°
C5C6N1C22.5°0.3°
C5C6N1C1C178.9°180.0°
C6N1C2N31.5°0.3°
C6N1C2C1C176.6°179.8°
C6N1C2O2178.3°179.7°
C6N1C1CC2C63.1°118.2°
C6N1C1CO4C55.4°126.5°
N1C6C5H2178.2°179.7°
C6N1C1CH6174.0°4.2°
N3C2N1O2179.8°179.9°
N3C2N1C1C178.1°180.0°
O1APAO2AO3A122.9°120.0°
O1APAO2AO5C121.7°120.0°
O1APAO3AO5C119.4°120.1°
O1APAO3APB59.6°44.9°
O1APAO5CC5C4.9°55.0°
O1APAO2AH90.0°180.0°
C2N1C1CC2C120.6°62.1°
C2N1C1CO4C121.0°53.3°
N1C2N3H1179.7°180.0°
C2N1C6H3177.5°179.8°
C2N1C1CH62.3°175.5°
O2C2N1C1C1.7°0.1°
O2C2N3H10.1°0.1°
N1C1CC2CO2C84.9°98.6°
N1C1CC2CO4C119.8°118.8°
N1C1CC2CH6123.3°122.3°
N1C1CC2CC3C154.1°142.8°
N1C1CO4CH6118.7°122.2°
N1C1CO4CC4C151.8°159.3°
C1CN1C6H31.1°0.0°
N1C1CC2CH1139.0°24.1°
O2CC2CC1CC3C121.1°118.6°
O2CC2CC1CH11123.8°122.7°
O2CC2CC3CH11121.0°122.7°
O2CC2CC1CO4C155.4°142.6°
O2CC2CC3CC4C152.2°118.6°
O2CC2CC3CO3C32.0°0.1°
O2CC2CC1CH638.4°23.7°
O2CC2CC3CH1591.5°122.8°
C1CC2CC3CH11115.4°118.7°
C2CC1CO4CH6116.5°119.0°
C2CC1CO4CC4C27.0°40.6°
C1CC2CC3CC4C28.6°0.1°
C1CC2CC3CO3C91.6°118.7°
C1CC2CO2CH12180.0°180.0°
C1CC2CC3CH15144.9°118.7°
C3CC2CC1CO4C34.3°24.1°
C2CC3CC4CO4C13.1°23.9°
C2CC3CC4CC5C105.1°142.9°
C2CC3CC4CO3C122.1°118.7°
C2CC3CC4CH15116.2°118.6°
C2CC3CO3CH15122.6°122.6°
C3CC2CC1CH682.7°94.9°
C3CC2CO2CH1263.4°65.4°
C2CC3CO3CH16180.0°61.4°
C2CC3CC4CH19134.5°94.9°
O1BPBO3APA109.9°45.1°
O1BPBO3AO2B125.3°120.0°
O1BPBO3AO3B117.5°120.0°
O1BPBO2BO3B122.2°120.0°
O1BPBO3BC1'42.1°55.0°
O1BPBO2BH100.0°180.0°
C8'C7'N2'O7'179.5°179.9°
C8'C7'N2'C2'178.7°180.0°
C8'C7'N2'H81.3°0.1°
C7'C8'H23H24120.0°120.0°
C7'C8'H23H25120.0°119.9°
C7'C8'H24H25120.0°120.0°
O2APAO3AO5C118.1°120.0°
O2APAO3APB177.9°75.1°
O2APAO5CC5C116.4°65.0°
C1CO4CC4CC5C123.6°159.4°
C1CO4CC4CC3C8.3°40.5°
O4CC1CC2CH1180.8°94.7°
C1CO4CC4CH19112.4°78.3°
O3APAO5CC5C124.4°175.1°
PAO3APBO2B15.4°74.9°
PAO3APBO3B132.5°165.1°
O3APAO2AH9122.9°60.0°
O5CPAO3APB59.8°164.9°
PAO5CC5CC4C132.2°180.0°
O5CPAO2AH9121.7°60.0°
PAO5CC5CH2111.8°60.0°
PAO5CC5CH22107.4°60.0°
O3APBO2BO3B117.0°120.0°
O3APBO3BC1'73.0°174.9°
O3APBO2BH10120.8°60.0°
O4CC4CC5CO5C67.4°69.6°
O4CC4CC5CC3C115.5°115.5°
O4CC4CC5CH19124.3°122.3°
O4CC4CC3CH19121.4°118.9°
O4CC4CC3CO3C108.9°142.6°
C4CO4CC1CH689.5°78.5°
O4CC4CC3CH15129.4°94.6°
O4CC4CC5CH2153.0°170.5°
O4CC4CC5CH22172.3°50.5°
O5CC5CC4CH21120.4°120.0°
O5CC5CC4CH22120.4°120.1°
O5CC5CC4CC3C177.2°174.9°
O5CC5CC4CH1957.0°52.7°
O5CC5CH21H22118.8°120.0°
C5CC4CC3CH19120.4°122.2°
C5CC4CC3CO3C132.9°98.4°
C5CC4CC3CH1511.2°24.3°
C4CC5CH21H22118.8°120.0°
C4CC3CO3CH15120.8°122.7°
C4CC3CC2CH1186.8°118.6°
C4CC3CO3CH1663.4°176.1°
C3CC4CC5CH2162.5°55.0°
C3CC4CC5CH2256.8°65.0°
O3CC3CC2CH11153.0°122.6°
O3CC3CC4CH1912.5°23.8°
O2BPBO3BC1'166.9°65.0°
PBO3BC1'C2'107.0°150.0°
PBO3BC1'O5'138.3°90.1°
PBO3BC1'H516.1°30.0°
O3BPBO2BH10122.2°60.0°
C7'N2'C2'H8180.0°180.0°
C7'N2'C2'C1'140.3°85.0°
C7'N2'C2'C3'97.9°155.3°
C7'N2'C2'H721.6°35.1°
N2'C7'C8'H23179.5°0.1°
N2'C7'C8'H2460.4°120.0°
N2'C7'C8'H2559.5°120.0°
O7'C7'N2'C2'0.8°0.0°
O7'C7'N2'H8179.2°180.0°
O7'C7'C8'H230.0°180.0°
O7'C7'C8'H24120.0°59.9°
O7'C7'C8'H25120.0°60.1°
N2'C2'C1'O3B78.2°57.6°
N2'C2'C1'C3'123.7°120.0°
N2'C2'C1'H7119.2°120.2°
N2'C2'C1'O5'167.8°177.5°
N2'C2'C3'H7119.9°120.2°
N2'C2'C3'N3'56.8°63.2°
N2'C2'C3'C4'175.8°176.9°
N2'C2'C1'H545.8°62.4°
N2'C2'C3'H1365.3°57.0°
O3BC1'C2'O5'114.1°119.9°
O3BC1'C2'H5124.0°120.0°
O3BC1'O5'H5122.2°120.1°
O3BC1'C2'C3'45.5°62.4°
O3BC1'O5'C5'52.2°58.8°
O3BC1'C2'H7162.6°177.7°
O43C41C42N3'178.3°179.9°
O43C41N3'C3'3.9°0.1°
O43C41N3'H14176.1°180.0°
O43C41C42H260.0°0.0°
O43C41C42H27120.0°120.0°
O43C41C42H28120.0°120.0°
C2'C1'O5'H5120.9°120.0°
C1'C2'C3'H7116.9°119.9°
C1'C2'C3'N3'180.0°176.8°
C1'C2'C3'C4'61.1°56.9°
C2'C1'O5'C5'64.7°61.1°
C1'C2'N2'H839.7°95.1°
C1'C2'C3'H1357.8°63.0°
O5'C1'C2'C3'68.5°57.5°
C1'O5'C5'C4'55.8°61.1°
C1'O5'C5'C6'176.4°178.9°
O5'C1'C2'H748.6°62.3°
C1'O5'C5'H2064.5°58.9°
C2'C3'N3'C41106.1°155.0°
C2'C3'N3'C4'118.2°119.5°
C2'C3'N3'H13121.5°120.2°
C2'C3'C4'H13118.8°119.9°
C2'C3'C4'C5'51.1°57.0°
C2'C3'C4'O4'172.7°176.9°
C3'C2'C1'H5169.5°177.6°
C3'C2'N2'H882.1°24.7°
C2'C3'N3'H1473.9°25.0°
C2'C3'C4'H1769.2°63.0°
C42C41N3'C3'174.3°180.0°
C42C41N3'H145.7°0.0°
C41C42H26H27120.0°120.1°
C41C42H26H28120.0°120.1°
C41C42H27H28120.0°120.0°
C41N3'C3'H14180.0°180.0°
C41N3'C3'C4'135.7°85.5°
C41N3'C3'H1315.4°34.8°
N3'C41C42H26178.4°180.0°
N3'C41C42H2758.3°60.0°
N3'C41C42H2861.7°59.9°
N3'C3'C4'H13120.8°120.3°
N3'C3'C4'C5'171.6°176.8°
N3'C3'C4'O4'66.9°63.2°
N3'C3'C2'H763.1°56.9°
N3'C3'C4'H1751.2°56.8°
C3'C4'C5'O5'48.8°57.6°
C3'C4'C5'O4'118.2°119.9°
C3'C4'C5'H17120.7°119.9°
C3'C4'C5'C6'170.1°177.6°
C3'C4'O4'H17117.5°120.1°
C4'C3'C2'H755.9°62.9°
C4'C3'N3'H1444.3°94.5°
C3'C4'O4'H18180.0°180.0°
C3'C4'C5'H2072.1°62.4°
O5'C5'C4'C6'121.3°120.0°
O5'C5'C4'H20120.9°120.0°
O5'C5'C6'H20119.5°120.0°
O5'C5'C4'O4'167.0°177.5°
O5'C5'C6'O'Q38.2°5.0°
O5'C5'C6'O'P145.3°175.1°
C5'O5'C1'H5174.4°178.9°
O5'C5'C4'H1772.0°62.3°
C4'C5'C6'H20117.5°120.0°
C5'C4'O4'H17120.2°120.2°
C4'C5'C6'O'Q84.9°115.0°
C4'C5'C6'O'P91.7°65.0°
C5'C4'C3'H1367.6°62.9°
C5'C4'O4'H1857.7°60.3°
C6'C5'C4'O4'71.7°62.5°
C5'C6'O'QO'P176.4°179.9°
C5'C6'O'PH4176.4°180.0°
C6'C5'C4'H1749.4°57.7°
O4'C4'C3'H1353.9°57.0°
O4'C4'C5'H2046.1°57.5°
O'QC6'O'PH40.0°0.1°
O'QC6'C5'H20157.6°125.0°
O'PC6'C5'H2025.8°55.0°
H2C5C6H31.8°0.2°
H5C1'C2'H773.4°57.7°
H6C1CC2CH11162.3°146.4°
H7C2'N2'H8158.4°144.8°
H7C2'C3'H13174.8°177.1°
H11C2CO2CH1256.7°57.3°
H11C2CC3CH1529.5°0.0°
H13C3'N3'H14164.6°145.2°
H13C3'C4'H17172.0°177.1°
H15C3CO3CH1657.4°61.2°
H15C3CC4CH19109.2°146.5°
H17C4'O4'H1862.5°59.9°
H17C4'C5'H20167.1°177.7°
H19C4CC5CH21177.4°67.2°
H19C4CC5CH2263.4°172.8°
H23C8'H24H25120.0°120.0°
H26C42H27H28120.0°119.9°

249697

PDB entries from 2026-02-25

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