MIK
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N | CA | sing | 1.46Å | 1.50Å | |
N | H1 | sing | 1.00Å | 1.02Å | |
N | H2 | sing | 1.00Å | 1.02Å | |
CA | C | sing | 1.52Å | 1.57Å | |
CA | CB | sing | 1.54Å | 1.53Å | |
CA | HA | sing | 1.10Å | 1.12Å | |
C | O | doub | 1.22Å | 1.24Å | |
C | OXT | sing | 1.36Å | 1.33Å | |
CB | CG | sing | 1.54Å | 1.53Å | |
CB | HBC1 | sing | 1.10Å | 1.12Å | |
CB | HBC2 | sing | 1.10Å | 1.11Å | |
CG | CD | sing | 1.53Å | 1.53Å | |
CG | HGC1 | sing | 1.10Å | 1.12Å | |
CG | HGC2 | sing | 1.10Å | 1.12Å | |
CD | CE | sing | 1.52Å | 1.53Å | |
CD | HDC1 | sing | 1.10Å | 1.12Å | |
CD | HDC2 | sing | 1.10Å | 1.12Å | |
CE | NZ | sing | 1.46Å | 1.47Å | |
CE | HEC1 | sing | 1.10Å | 1.11Å | |
CE | HEC2 | sing | 1.09Å | 1.11Å | |
NZ | CI1 | doub | 1.29Å | 1.30Å | |
CI1 | CI2 | sing | 1.49Å | 1.50Å | |
CI1 | NI1 | sing | 1.38Å | 1.30Å | |
CI2 | CI3 | doub | 1.37Å | 1.40Å | Aromatic |
CI2 | CI6 | sing | 1.37Å | 1.40Å | Aromatic |
NI1 | HI1 | sing | 1.01Å | 1.02Å | |
CI3 | CI4 | sing | 1.39Å | 1.40Å | Aromatic |
CI3 | HI3 | sing | 1.08Å | 1.10Å | |
CI4 | NI2 | doub | 1.35Å | 1.40Å | Aromatic |
CI4 | HI4 | sing | 1.08Å | 1.10Å | |
NI2 | CI5 | sing | 1.35Å | 1.40Å | Aromatic |
CI5 | CI6 | doub | 1.39Å | 1.40Å | Aromatic |
CI5 | HI5 | sing | 1.08Å | 1.10Å | |
CI6 | HI6 | sing | 1.09Å | 1.10Å | |
OXT | HXT | sing | 0.98Å | 0.95Å | |
HN1 | NI1 | sing | 1.01Å | 1.00Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
CA | N | H1 | 139.6° | 118.0° |
CA | N | H2 | 112.5° | 118.0° |
N | CA | C | 108.7° | 108.2° |
N | CA | CB | 106.4° | 111.5° |
N | CA | HA | 110.9° | 107.8° |
H1 | N | H2 | 107.8° | 122.6° |
C | CA | CB | 108.8° | 112.1° |
C | CA | HA | 110.9° | 107.6° |
CA | C | O | 121.0° | 126.3° |
CA | C | OXT | 115.7° | 110.5° |
CB | CA | HA | 110.9° | 109.3° |
CA | CB | CG | 112.7° | 114.5° |
CA | CB | HBC1 | 111.0° | 109.1° |
CA | CB | HBC2 | 111.0° | 108.9° |
O | C | OXT | 123.3° | 123.2° |
C | OXT | HXT | 115.7° | 111.9° |
CG | CB | HBC1 | 111.0° | 108.8° |
CG | CB | HBC2 | 111.0° | 108.9° |
CB | CG | CD | 113.4° | 111.1° |
CB | CG | HGC1 | 110.8° | 109.9° |
CB | CG | HGC2 | 110.7° | 109.9° |
HBC1 | CB | HBC2 | 99.3° | 106.2° |
CD | CG | HGC1 | 110.8° | 109.6° |
CD | CG | HGC2 | 110.7° | 109.1° |
CG | CD | CE | 112.7° | 112.5° |
CG | CD | HDC1 | 111.0° | 109.1° |
CG | CD | HDC2 | 111.0° | 109.6° |
HGC1 | CG | HGC2 | 99.6° | 107.2° |
CE | CD | HDC1 | 111.0° | 108.6° |
CE | CD | HDC2 | 111.0° | 109.7° |
CD | CE | NZ | 112.4° | 109.9° |
CD | CE | HEC1 | 111.1° | 111.0° |
CD | CE | HEC2 | 111.2° | 109.7° |
HDC1 | CD | HDC2 | 99.3° | 107.1° |
NZ | CE | HEC1 | 111.1° | 109.6° |
NZ | CE | HEC2 | 111.1° | 108.7° |
CE | NZ | CI1 | 113.7° | 118.6° |
HEC1 | CE | HEC2 | 99.2° | 107.8° |
NZ | CI1 | CI2 | 118.8° | 119.4° |
NZ | CI1 | NI1 | 120.0° | 124.7° |
CI2 | CI1 | NI1 | 121.2° | 115.9° |
CI1 | CI2 | CI3 | 120.3° | 118.9° |
CI1 | CI2 | CI6 | 119.6° | 118.9° |
CI1 | NI1 | HI1 | 120.0° | 121.9° |
CI1 | NI1 | HN1 | 120.0° | 123.0° |
CI3 | CI2 | CI6 | 120.1° | 122.1° |
CI2 | CI3 | CI4 | 119.8° | 116.7° |
CI2 | CI3 | HI3 | 120.1° | 122.8° |
CI2 | CI6 | CI5 | 120.1° | 116.7° |
CI2 | CI6 | HI6 | 120.0° | 122.7° |
HI1 | NI1 | HN1 | 120.0° | 115.1° |
CI4 | CI3 | HI3 | 120.1° | 120.5° |
CI3 | CI4 | NI2 | 120.1° | 124.0° |
CI3 | CI4 | HI4 | 120.0° | 120.8° |
NI2 | CI4 | HI4 | 119.9° | 115.2° |
CI4 | NI2 | CI5 | 120.0° | 116.4° |
NI2 | CI5 | CI6 | 120.0° | 124.0° |
NI2 | CI5 | HI5 | 120.0° | 115.2° |
CI6 | CI5 | HI5 | 120.0° | 120.8° |
CI5 | CI6 | HI6 | 120.0° | 120.6° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
CA | N | H1 | H2 | 175.5° | 165.9° |
N | CA | C | CB | 115.5° | 123.5° |
N | CA | C | HA | 122.2° | 116.3° |
N | CA | CB | HA | 120.8° | 119.2° |
N | CA | C | O | 63.1° | 3.7° |
N | CA | C | OXT | 116.9° | 175.4° |
N | CA | CB | CG | 12.1° | 59.4° |
N | CA | CB | HBC1 | 113.2° | 178.4° |
N | CA | CB | HBC2 | 137.3° | 62.8° |
H1 | N | CA | C | 130.0° | 58.0° |
H1 | N | CA | CB | 113.0° | 178.2° |
H1 | N | CA | HA | 7.7° | 58.1° |
H2 | N | CA | C | 54.7° | 135.4° |
H2 | N | CA | CB | 62.3° | 11.6° |
H2 | N | CA | HA | 176.9° | 108.5° |
C | CA | CB | HA | 122.3° | 119.2° |
CA | C | O | OXT | 180.0° | 179.1° |
C | CA | CB | CG | 104.9° | 62.2° |
C | CA | CB | HBC1 | 129.8° | 60.0° |
C | CA | CB | HBC2 | 20.4° | 175.6° |
CA | C | OXT | HXT | 180.0° | 179.2° |
CB | CA | C | O | 52.4° | 119.7° |
CB | CA | C | OXT | 127.6° | 61.1° |
CA | CB | CG | HBC1 | 125.2° | 122.4° |
CA | CB | CG | HBC2 | 125.3° | 122.2° |
CA | CB | HBC1 | HBC2 | 116.9° | 117.3° |
CA | CB | CG | CD | 96.7° | 177.6° |
CA | CB | CG | HGC1 | 28.6° | 56.2° |
CA | CB | CG | HGC2 | 138.1° | 61.5° |
HA | CA | C | O | 174.7° | 120.0° |
HA | CA | C | OXT | 5.3° | 59.2° |
HA | CA | CB | CG | 132.8° | 178.5° |
HA | CA | CB | HBC1 | 7.6° | 59.2° |
HA | CA | CB | HBC2 | 101.9° | 56.3° |
O | C | OXT | HXT | 0.0° | 0.0° |
CG | CB | HBC1 | HBC2 | 116.9° | 117.1° |
CB | CG | CD | HGC1 | 125.3° | 121.6° |
CB | CG | CD | HGC2 | 125.2° | 121.3° |
CB | CG | HGC1 | HGC2 | 116.6° | 119.4° |
CB | CG | CD | CE | 121.4° | 179.4° |
CB | CG | CD | HDC1 | 3.9° | 60.0° |
CB | CG | CD | HDC2 | 113.4° | 57.0° |
HBC1 | CB | CG | CD | 138.1° | 60.0° |
HBC1 | CB | CG | HGC1 | 96.7° | 178.6° |
HBC1 | CB | CG | HGC2 | 12.8° | 60.9° |
HBC2 | CB | CG | CD | 28.6° | 55.4° |
HBC2 | CB | CG | HGC1 | 153.9° | 66.0° |
HBC2 | CB | CG | HGC2 | 96.6° | 176.3° |
CD | CG | HGC1 | HGC2 | 116.6° | 118.3° |
CG | CD | CE | HDC1 | 125.3° | 120.9° |
CG | CD | CE | HDC2 | 125.3° | 122.3° |
CG | CD | HDC1 | HDC2 | 116.9° | 118.5° |
CG | CD | CE | NZ | 56.4° | 61.4° |
CG | CD | CE | HEC1 | 178.3° | 60.0° |
CG | CD | CE | HEC2 | 68.8° | 179.1° |
HGC1 | CG | CD | CE | 113.4° | 57.9° |
HGC1 | CG | CD | HDC1 | 121.4° | 178.5° |
HGC1 | CG | CD | HDC2 | 11.9° | 64.5° |
HGC2 | CG | CD | CE | 3.9° | 59.2° |
HGC2 | CG | CD | HDC1 | 129.1° | 61.4° |
HGC2 | CG | CD | HDC2 | 121.4° | 178.4° |
CE | CD | HDC1 | HDC2 | 116.9° | 118.5° |
CD | CE | NZ | HEC1 | 125.3° | 122.2° |
CD | CE | NZ | HEC2 | 125.3° | 120.2° |
CD | CE | HEC1 | HEC2 | 117.0° | 120.2° |
CD | CE | NZ | CI1 | 178.7° | 177.8° |
HDC1 | CD | CE | NZ | 68.9° | 177.7° |
HDC1 | CD | CE | HEC1 | 56.4° | 60.9° |
HDC1 | CD | CE | HEC2 | 165.9° | 58.2° |
HDC2 | CD | CE | NZ | 178.3° | 60.9° |
HDC2 | CD | CE | HEC1 | 53.1° | 177.7° |
HDC2 | CD | CE | HEC2 | 56.4° | 58.6° |
NZ | CE | HEC1 | HEC2 | 117.0° | 118.2° |
CE | NZ | CI1 | CI2 | 179.7° | 179.7° |
CE | NZ | CI1 | NI1 | 0.4° | 0.3° |
HEC1 | CE | NZ | CI1 | 56.0° | 60.0° |
HEC2 | CE | NZ | CI1 | 53.4° | 57.7° |
NZ | CI1 | CI2 | NI1 | 179.9° | 179.4° |
NZ | CI1 | CI2 | CI3 | 179.8° | 30.0° |
NZ | CI1 | CI2 | CI6 | 0.3° | 150.0° |
NZ | CI1 | NI1 | HI1 | 180.0° | 0.7° |
NZ | CI1 | NI1 | HN1 | 0.0° | 177.2° |
CI1 | CI2 | CI3 | CI6 | 179.9° | 179.9° |
CI2 | CI1 | NI1 | HI1 | 0.1° | 179.9° |
CI1 | CI2 | CI3 | CI4 | 179.9° | 180.0° |
CI1 | CI2 | CI3 | HI3 | 0.1° | 0.1° |
CI1 | CI2 | CI6 | CI5 | 179.9° | 180.0° |
CI1 | CI2 | CI6 | HI6 | 0.1° | 0.1° |
CI2 | CI1 | NI1 | HN1 | 179.9° | 2.2° |
NI1 | CI1 | CI2 | CI3 | 0.3° | 149.4° |
NI1 | CI1 | CI2 | CI6 | 179.7° | 30.6° |
CI1 | NI1 | HI1 | HN1 | 180.0° | 178.1° |
CI2 | CI3 | CI4 | HI3 | 180.0° | 180.0° |
CI2 | CI3 | CI4 | NI2 | 0.2° | 0.0° |
CI2 | CI3 | CI4 | HI4 | 179.8° | 180.0° |
CI3 | CI2 | CI6 | CI5 | 0.1° | 0.1° |
CI3 | CI2 | CI6 | HI6 | 179.9° | 180.0° |
CI6 | CI2 | CI3 | CI4 | 0.2° | 0.1° |
CI6 | CI2 | CI3 | HI3 | 179.8° | 180.0° |
CI2 | CI6 | CI5 | NI2 | 0.1° | 0.1° |
CI2 | CI6 | CI5 | HI6 | 180.0° | 179.9° |
CI2 | CI6 | CI5 | HI5 | 179.9° | 179.9° |
CI3 | CI4 | NI2 | HI4 | 180.0° | 180.0° |
CI3 | CI4 | NI2 | CI5 | 0.1° | 0.0° |
HI3 | CI3 | CI4 | NI2 | 179.8° | 180.0° |
HI3 | CI3 | CI4 | HI4 | 0.2° | 0.0° |
CI4 | NI2 | CI5 | CI6 | 0.1° | 0.0° |
CI4 | NI2 | CI5 | HI5 | 179.9° | 179.9° |
HI4 | CI4 | NI2 | CI5 | 179.9° | 180.0° |
NI2 | CI5 | CI6 | HI5 | 180.0° | 180.0° |
NI2 | CI5 | CI6 | HI6 | 179.9° | 180.0° |
HI5 | CI5 | CI6 | HI6 | 0.1° | 0.0° |