MHH
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C1 | C2 | sing | 1.53Å | 1.54Å | |
P | C1 | sing | 1.82Å | 1.90Å | |
C1 | H1 | sing | 1.09Å | 1.10Å | |
C1 | H1A | sing | 1.09Å | 1.10Å | |
C2 | C3 | sing | 1.53Å | 1.51Å | |
C2 | H2 | sing | 1.09Å | 1.10Å | |
C2 | H2A | sing | 1.09Å | 1.10Å | |
C3 | C4 | sing | 1.53Å | 1.52Å | |
C3 | H3 | sing | 1.09Å | 1.10Å | |
C3 | H3A | sing | 1.09Å | 1.10Å | |
C7 | O1 | sing | 1.43Å | 1.36Å | |
C7 | H7 | sing | 1.09Å | 1.10Å | |
C7 | H7A | sing | 1.09Å | 1.10Å | |
C7 | H7B | sing | 1.09Å | 1.10Å | |
O3 | P | doub | 1.48Å | 1.76Å | |
P | O2 | sing | 1.61Å | 1.48Å | |
P | O1 | sing | 1.61Å | 1.66Å | |
O2 | HO2 | sing | 0.97Å | 0.95Å | |
C4 | C5 | sing | 1.53Å | 1.53Å | |
C4 | H4 | sing | 1.09Å | 1.10Å | |
C4 | H4A | sing | 1.09Å | 1.10Å | |
C5 | C6 | sing | 1.53Å | 1.55Å | |
C5 | H5 | sing | 1.09Å | 1.10Å | |
C5 | H5A | sing | 1.09Å | 1.10Å | |
C6 | H6 | sing | 1.09Å | 1.10Å | |
C6 | H6A | sing | 1.09Å | 1.10Å | |
C6 | H6B | sing | 1.09Å | 1.10Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C1 | P | 104.5° | 109.4° |
C2 | C1 | H1 | 111.2° | 109.5° |
C2 | C1 | H1A | 112.2° | 109.5° |
C1 | C2 | C3 | 116.0° | 109.5° |
C1 | C2 | H2 | 107.4° | 109.5° |
C1 | C2 | H2A | 105.9° | 109.5° |
P | C1 | H1 | 111.2° | 109.5° |
P | C1 | H1A | 112.2° | 109.5° |
C1 | P | O3 | 97.7° | 109.5° |
C1 | P | O2 | 103.9° | 109.5° |
C1 | P | O1 | 125.8° | 109.4° |
H1 | C1 | H1A | 105.7° | 109.4° |
C3 | C2 | H2 | 107.3° | 109.4° |
C3 | C2 | H2A | 105.8° | 109.5° |
C2 | C3 | C4 | 111.5° | 109.4° |
C2 | C3 | H3 | 108.8° | 109.5° |
C2 | C3 | H3A | 108.3° | 109.5° |
H2 | C2 | H2A | 114.7° | 109.4° |
C4 | C3 | H3 | 108.8° | 109.4° |
C4 | C3 | H3A | 108.4° | 109.5° |
C3 | C4 | C5 | 108.1° | 109.4° |
C3 | C4 | H4 | 109.9° | 109.5° |
C3 | C4 | H4A | 110.3° | 109.5° |
H3 | C3 | H3A | 111.0° | 109.5° |
O1 | C7 | H7 | 109.5° | 109.5° |
O1 | C7 | H7A | 109.5° | 109.5° |
O1 | C7 | H7B | 109.5° | 109.5° |
C7 | O1 | P | 139.8° | 123.0° |
H7 | C7 | H7A | 109.4° | 109.5° |
H7 | C7 | H7B | 109.5° | 109.5° |
H7A | C7 | H7B | 109.5° | 109.5° |
O3 | P | O2 | 108.6° | 109.5° |
O3 | P | O1 | 110.0° | 109.5° |
O2 | P | O1 | 109.4° | 109.4° |
P | O2 | HO2 | 109.5° | 114.1° |
C5 | C4 | H4 | 110.0° | 109.4° |
C5 | C4 | H4A | 110.2° | 109.5° |
C4 | C5 | C6 | 111.7° | 109.5° |
C4 | C5 | H5 | 108.8° | 109.5° |
C4 | C5 | H5A | 108.2° | 109.5° |
H4 | C4 | H4A | 108.4° | 109.5° |
C6 | C5 | H5 | 108.7° | 109.5° |
C6 | C5 | H5A | 108.2° | 109.5° |
C5 | C6 | H6 | 109.5° | 109.5° |
C5 | C6 | H6A | 109.4° | 109.5° |
C5 | C6 | H6B | 109.5° | 109.5° |
H5 | C5 | H5A | 111.2° | 109.4° |
H6 | C6 | H6A | 109.5° | 109.5° |
H6 | C6 | H6B | 109.5° | 109.4° |
H6A | C6 | H6B | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C1 | P | H1 | 120.0° | 120.0° |
C2 | C1 | P | H1A | 121.9° | 120.0° |
C2 | C1 | H1 | H1A | 122.0° | 120.0° |
C1 | C2 | C3 | H2 | 120.0° | 120.1° |
C1 | C2 | C3 | H2A | 117.0° | 120.1° |
C1 | C2 | H2 | H2A | 117.3° | 120.0° |
C1 | C2 | C3 | C4 | 179.6° | 180.0° |
C1 | C2 | C3 | H3 | 60.4° | 60.0° |
C1 | C2 | C3 | H3A | 60.4° | 60.0° |
C2 | C1 | P | O3 | 177.1° | 55.0° |
C2 | C1 | P | O2 | 71.4° | 65.1° |
C2 | C1 | P | O1 | 55.5° | 175.0° |
P | C1 | H1 | H1A | 122.0° | 120.0° |
P | C1 | C2 | C3 | 178.8° | 180.0° |
P | C1 | C2 | H2 | 61.2° | 60.0° |
P | C1 | C2 | H2A | 61.8° | 60.0° |
C1 | P | O1 | C7 | 160.1° | 175.0° |
C1 | P | O3 | O2 | 107.6° | 120.1° |
C1 | P | O3 | O1 | 132.6° | 120.0° |
C1 | P | O2 | O1 | 136.5° | 119.9° |
C1 | P | O2 | HO2 | 52.9° | 60.0° |
H1 | C1 | C2 | C3 | 61.2° | 60.0° |
H1 | C1 | C2 | H2 | 58.8° | 60.0° |
H1 | C1 | C2 | H2A | 178.2° | 180.0° |
H1 | C1 | P | O3 | 57.1° | 175.0° |
H1 | C1 | P | O2 | 168.5° | 54.9° |
H1 | C1 | P | O1 | 64.5° | 65.0° |
H1A | C1 | C2 | C3 | 56.9° | 60.0° |
H1A | C1 | C2 | H2 | 176.9° | 180.0° |
H1A | C1 | C2 | H2A | 60.1° | 60.1° |
H1A | C1 | P | O3 | 61.0° | 65.0° |
H1A | C1 | P | O2 | 50.4° | 174.9° |
H1A | C1 | P | O1 | 177.4° | 55.0° |
C3 | C2 | H2 | H2A | 117.3° | 119.9° |
C2 | C3 | C4 | H3 | 120.0° | 119.9° |
C2 | C3 | C4 | H3A | 119.2° | 120.0° |
C2 | C3 | H3 | H3A | 119.2° | 120.0° |
C2 | C3 | C4 | C5 | 142.4° | 180.0° |
C2 | C3 | C4 | H4 | 22.4° | 60.1° |
C2 | C3 | C4 | H4A | 97.0° | 60.0° |
H2 | C2 | C3 | C4 | 59.6° | 60.0° |
H2 | C2 | C3 | H3 | 179.6° | 179.9° |
H2 | C2 | C3 | H3A | 59.6° | 60.1° |
H2A | C2 | C3 | C4 | 63.4° | 59.9° |
H2A | C2 | C3 | H3 | 56.6° | 60.0° |
H2A | C2 | C3 | H3A | 177.5° | 180.0° |
C4 | C3 | H3 | H3A | 119.2° | 120.1° |
C3 | C4 | C5 | H4 | 120.0° | 120.0° |
C3 | C4 | C5 | H4A | 120.6° | 120.0° |
C3 | C4 | H4 | H4A | 120.6° | 120.1° |
C3 | C4 | C5 | C6 | 94.9° | 180.0° |
C3 | C4 | C5 | H5 | 145.1° | 60.0° |
C3 | C4 | C5 | H5A | 24.2° | 59.9° |
H3 | C3 | C4 | C5 | 97.6° | 60.1° |
H3 | C3 | C4 | H4 | 142.4° | 180.0° |
H3 | C3 | C4 | H4A | 23.0° | 59.9° |
H3A | C3 | C4 | C5 | 23.2° | 60.0° |
H3A | C3 | C4 | H4 | 96.8° | 59.9° |
H3A | C3 | C4 | H4A | 143.8° | 180.0° |
O1 | C7 | H7 | H7A | 120.0° | 120.0° |
O1 | C7 | H7 | H7B | 120.0° | 120.0° |
O1 | C7 | H7A | H7B | 120.0° | 120.0° |
C7 | O1 | P | O3 | 83.8° | 55.0° |
C7 | O1 | P | O2 | 35.5° | 65.0° |
H7 | C7 | H7A | H7B | 120.0° | 120.0° |
H7 | C7 | O1 | P | 54.0° | 60.0° |
H7A | C7 | O1 | P | 66.0° | 180.0° |
H7B | C7 | O1 | P | 174.0° | 60.0° |
O3 | P | O2 | O1 | 120.2° | 120.0° |
O3 | P | O2 | HO2 | 156.2° | 180.0° |
O1 | P | O2 | HO2 | 83.6° | 60.0° |
C5 | C4 | H4 | H4A | 120.6° | 120.0° |
C4 | C5 | C6 | H5 | 120.0° | 120.0° |
C4 | C5 | C6 | H5A | 119.1° | 120.0° |
C4 | C5 | H5 | H5A | 119.1° | 120.0° |
C4 | C5 | C6 | H6 | 51.5° | 60.0° |
C4 | C5 | C6 | H6A | 68.5° | 60.0° |
C4 | C5 | C6 | H6B | 171.6° | 180.0° |
H4 | C4 | C5 | C6 | 25.1° | 60.0° |
H4 | C4 | C5 | H5 | 94.9° | 180.0° |
H4 | C4 | C5 | H5A | 144.1° | 60.0° |
H4A | C4 | C5 | C6 | 144.5° | 60.0° |
H4A | C4 | C5 | H5 | 24.5° | 60.0° |
H4A | C4 | C5 | H5A | 96.4° | 180.0° |
C6 | C5 | H5 | H5A | 119.1° | 120.0° |
C5 | C6 | H6 | H6A | 120.0° | 120.0° |
C5 | C6 | H6 | H6B | 120.0° | 120.0° |
C5 | C6 | H6A | H6B | 120.0° | 120.0° |
H5 | C5 | C6 | H6 | 171.6° | 179.9° |
H5 | C5 | C6 | H6A | 51.6° | 60.0° |
H5 | C5 | C6 | H6B | 68.4° | 60.0° |
H5A | C5 | C6 | H6 | 67.5° | 60.0° |
H5A | C5 | C6 | H6A | 172.5° | 180.0° |
H5A | C5 | C6 | H6B | 52.5° | 60.0° |
H6 | C6 | H6A | H6B | 120.0° | 119.9° |