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MHD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C2C1doub1.34Å1.41ÅAromatic
C2N3sing1.37Å1.35ÅAromatic
O1C1sing1.36Å1.44Å
C10N3sing1.46Å1.46Å
C1C9sing1.47Å1.42ÅAromatic
N3C4sing1.38Å1.37ÅAromatic
C9C4doub1.41Å1.41ÅAromatic
C9C8sing1.40Å1.42ÅAromatic
C4C5sing1.39Å1.48ÅAromatic
C8C7doub1.37Å1.47ÅAromatic
C5C6doub1.38Å1.41ÅAromatic
C7C6sing1.39Å1.42ÅAromatic
C10H1sing1.09Å1.10Å
C10H2sing1.09Å1.10Å
C10H3sing1.09Å1.10Å
C2H4sing1.08Å1.08Å
C5H5sing1.08Å1.08Å
C6H6sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
O1H9sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C1C2N3107.2°109.8°
C2C1O1128.5°126.5°
C2C1C9108.1°107.0°
C1C2H4126.4°125.1°
C2N3C10125.0°125.1°
C2N3C4110.7°109.8°
N3C2H4126.4°125.0°
O1C1C9123.5°126.5°
C1O1H9109.5°114.0°
C10N3C4124.4°125.1°
N3C10H1109.5°109.5°
N3C10H2109.5°109.5°
N3C10H3109.5°109.4°
C1C9C4105.8°106.2°
C1C9C8133.2°133.9°
N3C4C9108.3°107.2°
N3C4C5132.1°133.4°
C4C9C8121.0°119.9°
C9C4C5119.5°119.4°
C9C8C7119.5°119.8°
C9C8H8120.2°120.1°
C4C5C6119.7°119.7°
C4C5H5120.2°120.2°
C8C7C6119.6°120.5°
C8C7H7120.2°119.7°
C7C8H8120.3°120.1°
C5C6C7120.6°120.7°
C6C5H5120.1°120.1°
C5C6H6119.7°119.6°
C7C6H6119.7°119.7°
C6C7H7120.2°119.7°
H1C10H2109.5°109.5°
H1C10H3109.5°109.4°
H2C10H3109.5°109.5°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C1C2N3H4180.0°179.9°
C2C1O1C9179.9°179.9°
C1C2N3C10179.9°180.0°
C1C2N3C40.2°0.3°
C2C1C9C40.2°0.0°
C2C1C9C8179.5°179.8°
C2C1O1H9180.0°90.0°
N3C2C1O1179.9°180.0°
C2N3C10C4179.8°179.6°
N3C2C1C90.0°0.2°
C2N3C4C90.4°0.2°
C2N3C4C5180.0°179.7°
C2N3C10H1180.0°89.7°
C2N3C10H260.0°30.4°
C2N3C10H360.0°150.4°
O1C1C9C4179.9°179.9°
O1C1C9C80.6°0.1°
O1C1C2H40.1°0.0°
C10N3C4C9179.8°179.9°
C10N3C4C50.2°0.1°
N3C10H1H2120.0°120.0°
N3C10H1H3120.0°120.0°
N3C10H2H3120.0°120.0°
C10N3C2H40.1°0.1°
C1C9C4N30.3°0.1°
C1C9C4C8179.4°179.9°
C1C9C4C5180.0°179.9°
C1C9C8C7179.9°179.8°
C9C1C2H4180.0°179.9°
C1C9C8H80.1°0.2°
C9C1O1H90.1°89.8°
N3C4C9C5179.7°180.0°
N3C4C9C8179.8°180.0°
N3C4C5C6179.6°180.0°
C4N3C10H10.2°90.0°
C4N3C10H2120.2°150.0°
C4N3C10H3119.8°30.0°
C4N3C2H4179.8°179.8°
N3C4C5H50.4°0.0°
C4C9C8C70.7°0.0°
C9C4C5C60.0°0.0°
C9C4C5H5180.0°180.0°
C4C9C8H8179.3°180.0°
C8C9C4C50.5°0.0°
C9C8C7H8180.0°180.0°
C9C8C7C60.4°0.1°
C9C8C7H7179.7°180.0°
C4C5C6H5180.0°180.0°
C4C5C6C70.3°0.1°
C4C5C6H6179.7°180.0°
C8C7C6C50.2°0.1°
C8C7C6H7180.0°179.9°
C8C7C6H6179.9°180.0°
C5C6C7H6180.0°179.9°
C5C6C7H7179.8°180.0°
C7C6C5H5179.6°180.0°
C6C7C8H8179.7°179.9°
H1C10H2H3120.0°120.0°
H5C5C6H60.3°0.1°
H6C6C7H70.2°0.1°
H7C7C8H80.3°0.0°

226262

PDB entries from 2024-10-16

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