English 日本語简体中文繁體中文 한국어

✖

Menu

RCSB PDB PDBe BMRB Adv. Search Search help

Summary Geometry Related PDB entries

MH6

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
N	CA	doub	1.28Å	1.28Å
CA	C	sing	1.48Å	1.53Å
CA	CB	sing	1.51Å	1.47Å
C	O	doub	1.21Å	1.30Å
C	OXT	sing	1.35Å	1.65Å
CB	OG	sing	1.43Å	1.52Å
N	H	sing	0.97Å	1.00Å
CB	HB2	sing	1.09Å	1.10Å
CB	HB3	sing	1.09Å	1.10Å
OXT	HXT	sing	0.97Å	0.95Å
OG	HG	sing	0.97Å	0.95Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
N	CA	C	115.4°	120.0°
N	CA	CB	127.8°	120.0°
CA	N	H	112.0°	120.0°
C	CA	CB	116.7°	120.0°
CA	C	O	121.5°	120.0°
CA	C	OXT	122.2°	120.0°
CA	CB	OG	112.8°	109.5°
CA	CB	HB2	108.4°	109.4°
CA	CB	HB3	108.4°	109.4°
O	C	OXT	116.3°	120.0°
C	OXT	HXT	109.5°	116.9°
OG	CB	HB2	108.4°	109.5°
OG	CB	HB3	108.4°	109.5°
CB	OG	HG	109.5°	114.0°
HB2	CB	HB3	110.5°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
N	CA	C	CB	178.2°	180.0°
N	CA	C	O	129.8°	180.0°
N	CA	C	OXT	48.0°	0.0°
N	CA	CB	OG	8.8°	0.0°
N	CA	CB	HB2	128.9°	120.0°
N	CA	CB	HB3	111.2°	120.0°
CA	C	O	OXT	178.0°	180.0°
C	CA	CB	OG	173.2°	180.0°
C	CA	N	H	177.9°	180.0°
C	CA	CB	HB2	53.2°	60.0°
C	CA	CB	HB3	66.8°	60.0°
CA	C	OXT	HXT	178.0°	180.0°
CB	CA	C	O	52.0°	0.0°
CB	CA	C	OXT	130.2°	180.0°
CA	CB	OG	HB2	120.0°	120.0°
CA	CB	OG	HB3	120.0°	120.0°
CB	CA	N	H	0.0°	0.0°
CA	CB	HB2	HB3	118.6°	119.9°
CA	CB	OG	HG	180.0°	180.0°
O	C	OXT	HXT	0.0°	0.0°
OG	CB	HB2	HB3	118.6°	120.1°
HB2	CB	OG	HG	60.0°	60.0°
HB3	CB	OG	HG	60.0°	60.0°

246704

PDB entries from 2025-12-24

PDB statistics

PDBj update info

Contact PDBj

numon