MGT
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
PG | O1G | doub | 1.48Å | 1.49Å | |
PG | O2G | sing | 1.61Å | 1.46Å | |
PG | O3G | sing | 1.61Å | 1.62Å | |
PG | O3B | sing | 1.61Å | 1.63Å | |
O2G | HOG2 | sing | 0.97Å | 0.95Å | |
O3G | HOG3 | sing | 0.97Å | 0.95Å | |
O3B | PB | sing | 1.61Å | 1.66Å | |
PB | O1B | doub | 1.48Å | 1.49Å | |
PB | O2B | sing | 1.61Å | 1.49Å | |
PB | O3A | sing | 1.61Å | 1.58Å | |
O2B | HOB2 | sing | 0.97Å | 0.95Å | |
O3A | PA | sing | 1.61Å | 1.65Å | |
PA | O1A | doub | 1.48Å | 1.48Å | |
PA | O2A | sing | 1.61Å | 1.45Å | |
PA | O5' | sing | 1.61Å | 1.62Å | |
O2A | HOA2 | sing | 0.97Å | 0.95Å | |
O5' | C5' | sing | 1.43Å | 1.44Å | |
C5' | C4' | sing | 1.53Å | 1.54Å | |
C5' | H5'1 | sing | 1.09Å | 1.11Å | |
C5' | H5'2 | sing | 1.09Å | 1.11Å | |
C4' | O4' | sing | 1.44Å | 1.47Å | |
C4' | C3' | sing | 1.54Å | 1.57Å | |
C4' | H4' | sing | 1.09Å | 1.11Å | |
O4' | C1' | sing | 1.44Å | 1.41Å | |
C3' | O3' | sing | 1.43Å | 1.45Å | |
C3' | C2' | sing | 1.55Å | 1.48Å | |
C3' | H3' | sing | 1.09Å | 1.12Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å | |
C2' | O2' | sing | 1.43Å | 1.46Å | |
C2' | C1' | sing | 1.54Å | 1.57Å | |
C2' | H2' | sing | 1.09Å | 1.12Å | |
O2' | HO2' | sing | 0.97Å | 0.96Å | |
C1' | N9 | sing | 1.46Å | 1.51Å | |
C1' | H1' | sing | 1.09Å | 1.11Å | |
N9 | C8 | sing | 1.47Å | 1.39Å | |
N9 | C4 | sing | 1.38Å | 1.38Å | |
C8 | N7 | sing | 1.47Å | 1.30Å | |
C8 | H81 | sing | 1.09Å | 1.11Å | |
C8 | H82 | sing | 1.09Å | 1.12Å | |
N7 | CM7 | sing | 1.47Å | 1.43Å | |
N7 | C5 | sing | 1.41Å | 1.40Å | |
CM7 | HM71 | sing | 1.09Å | 1.12Å | |
CM7 | HM72 | sing | 1.09Å | 1.11Å | |
CM7 | HM73 | sing | 1.09Å | 1.12Å | |
C5 | C6 | sing | 1.40Å | 1.44Å | |
C5 | C4 | doub | 1.39Å | 1.37Å | |
C6 | O6 | doub | 1.22Å | 1.23Å | |
C6 | N1 | sing | 1.35Å | 1.35Å | |
N1 | C2 | sing | 1.36Å | 1.35Å | |
N1 | HN1 | sing | 0.97Å | 1.01Å | |
C2 | N2 | sing | 1.37Å | 1.30Å | |
C2 | N3 | doub | 1.31Å | 1.32Å | |
N2 | HN21 | sing | 0.97Å | 1.01Å | |
N2 | HN22 | sing | 0.97Å | 1.01Å | |
N3 | C4 | sing | 1.34Å | 1.34Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
O1G | PG | O2G | 119.2° | 109.4° |
O1G | PG | O3G | 100.4° | 109.5° |
O1G | PG | O3B | 115.9° | 109.4° |
O2G | PG | O3G | 108.3° | 109.5° |
O2G | PG | O3B | 107.1° | 109.5° |
PG | O2G | HOG2 | 119.3° | 106.8° |
O3G | PG | O3B | 104.4° | 109.5° |
PG | O3G | HOG3 | 100.4° | 106.8° |
PG | O3B | PB | 137.9° | 106.8° |
O3B | PB | O1B | 105.4° | 109.5° |
O3B | PB | O2B | 109.2° | 109.5° |
O3B | PB | O3A | 111.5° | 109.5° |
O1B | PB | O2B | 118.9° | 109.5° |
O1B | PB | O3A | 106.6° | 109.4° |
O2B | PB | O3A | 105.3° | 109.5° |
PB | O2B | HOB2 | 109.2° | 106.8° |
PB | O3A | PA | 127.9° | 106.8° |
O3A | PA | O1A | 109.1° | 109.5° |
O3A | PA | O2A | 115.9° | 109.5° |
O3A | PA | O5' | 93.4° | 109.5° |
O1A | PA | O2A | 119.4° | 109.4° |
O1A | PA | O5' | 106.8° | 109.5° |
O2A | PA | O5' | 108.7° | 109.5° |
PA | O2A | HOA2 | 115.9° | 106.8° |
PA | O5' | C5' | 127.0° | 106.8° |
O5' | C5' | C4' | 110.7° | 109.5° |
O5' | C5' | H5'1 | 111.7° | 109.5° |
O5' | C5' | H5'2 | 111.8° | 109.5° |
C4' | C5' | H5'1 | 111.8° | 109.4° |
C4' | C5' | H5'2 | 111.8° | 109.4° |
C5' | C4' | O4' | 110.4° | 110.4° |
C5' | C4' | C3' | 110.8° | 110.5° |
C5' | C4' | H4' | 107.8° | 110.3° |
H5'1 | C5' | H5'2 | 98.7° | 109.5° |
O4' | C4' | C3' | 109.0° | 104.8° |
O4' | C4' | H4' | 109.7° | 110.4° |
C4' | O4' | C1' | 103.9° | 105.3° |
C3' | C4' | H4' | 109.2° | 110.4° |
C4' | C3' | O3' | 118.4° | 110.6° |
C4' | C3' | C2' | 98.9° | 104.0° |
C4' | C3' | H3' | 108.7° | 110.5° |
O4' | C1' | C2' | 109.3° | 104.9° |
O4' | C1' | N9 | 105.0° | 110.4° |
O4' | C1' | H1' | 115.2° | 110.3° |
O3' | C3' | C2' | 101.7° | 110.5° |
O3' | C3' | H3' | 106.2° | 110.5° |
C3' | O3' | HO3' | 118.4° | 106.8° |
C2' | C3' | H3' | 123.8° | 110.6° |
C3' | C2' | O2' | 107.2° | 110.5° |
C3' | C2' | C1' | 101.0° | 104.0° |
C3' | C2' | H2' | 117.2° | 110.5° |
O2' | C2' | C1' | 112.4° | 110.8° |
O2' | C2' | H2' | 106.7° | 110.4° |
C2' | O2' | HO2' | 105.8° | 106.9° |
C1' | C2' | H2' | 112.4° | 110.4° |
C2' | C1' | N9 | 116.5° | 110.4° |
C2' | C1' | H1' | 103.3° | 110.3° |
N9 | C1' | H1' | 107.8° | 110.3° |
C1' | N9 | C8 | 132.0° | 126.1° |
C1' | N9 | C4 | 123.7° | 126.0° |
C8 | N9 | C4 | 104.3° | 107.8° |
N9 | C8 | N7 | 113.8° | 105.6° |
N9 | C8 | H81 | 110.6° | 110.2° |
N9 | C8 | H82 | 110.6° | 110.2° |
N9 | C4 | C5 | 107.8° | 110.1° |
N9 | C4 | N3 | 124.4° | 130.6° |
N7 | C8 | H81 | 110.6° | 110.3° |
N7 | C8 | H82 | 110.6° | 110.1° |
C8 | N7 | CM7 | 129.9° | 126.7° |
C8 | N7 | C5 | 104.7° | 106.7° |
H81 | C8 | H82 | 99.7° | 110.3° |
CM7 | N7 | C5 | 125.4° | 126.6° |
N7 | CM7 | HM71 | 130.0° | 109.4° |
N7 | CM7 | HM72 | 105.1° | 109.4° |
N7 | CM7 | HM73 | 105.1° | 109.5° |
N7 | C5 | C6 | 131.8° | 131.2° |
N7 | C5 | C4 | 109.5° | 109.8° |
HM71 | CM7 | HM72 | 105.1° | 109.5° |
HM71 | CM7 | HM73 | 105.0° | 109.5° |
HM72 | CM7 | HM73 | 104.0° | 109.5° |
C6 | C5 | C4 | 118.7° | 119.0° |
C5 | C6 | O6 | 133.8° | 120.6° |
C5 | C6 | N1 | 111.8° | 118.8° |
C5 | C4 | N3 | 127.8° | 119.4° |
O6 | C6 | N1 | 114.3° | 120.6° |
C6 | N1 | C2 | 124.8° | 120.0° |
C6 | N1 | HN1 | 113.5° | 120.0° |
C2 | N1 | HN1 | 121.7° | 119.9° |
N1 | C2 | N2 | 116.2° | 119.2° |
N1 | C2 | N3 | 125.1° | 121.5° |
N2 | C2 | N3 | 118.7° | 119.2° |
C2 | N2 | HN21 | 123.7° | 120.0° |
C2 | N2 | HN22 | 116.4° | 120.0° |
C2 | N3 | C4 | 111.8° | 121.3° |
HN21 | N2 | HN22 | 119.9° | 120.0° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
O1G | PG | O2G | O3G | 113.7° | 120.0° |
O1G | PG | O2G | O3B | 134.1° | 119.9° |
O1G | PG | O3G | O3B | 120.4° | 120.0° |
O1G | PG | O2G | HOG2 | 180.0° | 60.0° |
O1G | PG | O3G | HOG3 | 180.0° | 180.0° |
O1G | PG | O3B | PB | 29.7° | 60.0° |
O2G | PG | O3G | O3B | 113.9° | 120.0° |
O2G | PG | O3G | HOG3 | 54.3° | 60.0° |
O2G | PG | O3B | PB | 106.2° | 180.0° |
O3G | PG | O2G | HOG2 | 66.2° | 60.0° |
O3G | PG | O3B | PB | 139.1° | 60.0° |
O3B | PG | O2G | HOG2 | 45.9° | 180.0° |
O3B | PG | O3G | HOG3 | 59.6° | 60.0° |
PG | O3B | PB | O1B | 160.2° | 60.0° |
PG | O3B | PB | O2B | 31.4° | 60.0° |
PG | O3B | PB | O3A | 84.5° | 180.0° |
O3B | PB | O1B | O2B | 122.8° | 120.0° |
O3B | PB | O1B | O3A | 118.6° | 120.0° |
O3B | PB | O2B | O3A | 119.8° | 120.0° |
O3B | PB | O2B | HOB2 | 180.0° | 60.1° |
O3B | PB | O3A | PA | 53.4° | 180.0° |
O1B | PB | O2B | O3A | 119.3° | 120.0° |
O1B | PB | O2B | HOB2 | 59.1° | 179.9° |
O1B | PB | O3A | PA | 61.1° | 60.0° |
O2B | PB | O3A | PA | 171.7° | 60.0° |
O3A | PB | O2B | HOB2 | 60.2° | 60.0° |
PB | O3A | PA | O1A | 108.2° | 60.0° |
PB | O3A | PA | O2A | 30.0° | 60.0° |
PB | O3A | PA | O5' | 142.7° | 180.0° |
O3A | PA | O1A | O2A | 136.6° | 120.0° |
O3A | PA | O1A | O5' | 99.8° | 120.0° |
O3A | PA | O2A | O5' | 103.5° | 120.0° |
O3A | PA | O2A | HOA2 | 180.0° | 60.0° |
O3A | PA | O5' | C5' | 81.3° | 180.0° |
O1A | PA | O2A | O5' | 122.7° | 120.0° |
O1A | PA | O2A | HOA2 | 46.2° | 180.0° |
O1A | PA | O5' | C5' | 167.5° | 60.0° |
O2A | PA | O5' | C5' | 37.4° | 60.0° |
O5' | PA | O2A | HOA2 | 76.5° | 60.0° |
PA | O5' | C5' | C4' | 145.0° | 180.0° |
PA | O5' | C5' | H5'1 | 19.8° | 60.0° |
PA | O5' | C5' | H5'2 | 89.7° | 60.0° |
O5' | C5' | C4' | H5'1 | 125.2° | 120.0° |
O5' | C5' | C4' | H5'2 | 125.3° | 120.0° |
O5' | C5' | H5'1 | H5'2 | 117.7° | 120.1° |
O5' | C5' | C4' | O4' | 50.9° | 61.4° |
O5' | C5' | C4' | C3' | 70.0° | 176.9° |
O5' | C5' | C4' | H4' | 170.6° | 60.8° |
C4' | C5' | H5'1 | H5'2 | 117.7° | 119.9° |
C5' | C4' | O4' | C3' | 121.9° | 119.0° |
C5' | C4' | O4' | H4' | 118.6° | 122.2° |
C5' | C4' | C3' | H4' | 118.6° | 122.3° |
C5' | C4' | O4' | C1' | 134.5° | 159.5° |
C5' | C4' | C3' | O3' | 95.0° | 98.3° |
C5' | C4' | C3' | C2' | 156.5° | 143.0° |
C5' | C4' | C3' | H3' | 26.1° | 24.3° |
H5'1 | C5' | C4' | O4' | 176.1° | 178.5° |
H5'1 | C5' | C4' | C3' | 55.3° | 63.0° |
H5'1 | C5' | C4' | H4' | 64.1° | 59.3° |
H5'2 | C5' | C4' | O4' | 74.4° | 58.5° |
H5'2 | C5' | C4' | C3' | 164.8° | 56.9° |
H5'2 | C5' | C4' | H4' | 45.4° | 179.2° |
O4' | C4' | C3' | H4' | 119.8° | 118.8° |
O4' | C4' | C3' | O3' | 143.3° | 142.7° |
O4' | C4' | C3' | C2' | 34.8° | 24.0° |
O4' | C4' | C3' | H3' | 95.5° | 94.7° |
C4' | O4' | C1' | C2' | 14.0° | 40.4° |
C4' | O4' | C1' | N9 | 111.8° | 159.4° |
C4' | O4' | C1' | H1' | 129.8° | 78.4° |
C3' | C4' | O4' | C1' | 12.6° | 40.5° |
C4' | C3' | O3' | C2' | 106.9° | 114.7° |
C4' | C3' | O3' | H3' | 122.4° | 122.6° |
C4' | C3' | C2' | H3' | 119.7° | 118.6° |
C4' | C3' | O3' | HO3' | 180.0° | 180.0° |
C4' | C3' | C2' | O2' | 78.0° | 118.9° |
C4' | C3' | C2' | C1' | 39.8° | 0.1° |
C4' | C3' | C2' | H2' | 162.2° | 118.7° |
H4' | C4' | O4' | C1' | 106.8° | 78.3° |
H4' | C4' | C3' | O3' | 23.6° | 23.9° |
H4' | C4' | C3' | C2' | 84.9° | 94.8° |
H4' | C4' | C3' | H3' | 144.7° | 146.5° |
O4' | C1' | C2' | C3' | 36.6° | 23.8° |
O4' | C1' | C2' | O2' | 77.3° | 142.6° |
O4' | C1' | C2' | N9 | 118.8° | 119.0° |
O4' | C1' | C2' | H1' | 123.2° | 118.8° |
O4' | C1' | C2' | H2' | 162.3° | 94.7° |
O4' | C1' | N9 | H1' | 123.3° | 122.2° |
O4' | C1' | N9 | C8 | 71.4° | 122.9° |
O4' | C1' | N9 | C4 | 106.7° | 57.1° |
O3' | C3' | C2' | H3' | 118.7° | 122.6° |
O3' | C3' | C2' | O2' | 43.6° | 0.2° |
O3' | C3' | C2' | C1' | 161.3° | 118.8° |
O3' | C3' | C2' | H2' | 76.2° | 122.6° |
C2' | C3' | O3' | HO3' | 73.1° | 65.4° |
C3' | C2' | O2' | C1' | 110.1° | 114.8° |
C3' | C2' | O2' | H2' | 126.3° | 122.5° |
C3' | C2' | C1' | H2' | 125.7° | 118.5° |
C3' | C2' | O2' | HO2' | 37.7° | 61.4° |
C3' | C2' | C1' | N9 | 82.2° | 142.8° |
C3' | C2' | C1' | H1' | 159.8° | 95.0° |
H3' | C3' | O3' | HO3' | 57.6° | 57.3° |
H3' | C3' | C2' | O2' | 162.3° | 122.5° |
H3' | C3' | C2' | C1' | 79.9° | 118.5° |
H3' | C3' | C2' | H2' | 42.5° | 0.0° |
O2' | C2' | C1' | H2' | 120.4° | 122.7° |
O2' | C2' | C1' | N9 | 163.9° | 98.5° |
O2' | C2' | C1' | H1' | 45.9° | 23.8° |
C1' | C2' | O2' | HO2' | 147.8° | 176.2° |
C2' | C1' | N9 | H1' | 115.5° | 122.2° |
C2' | C1' | N9 | C8 | 49.8° | 121.5° |
C2' | C1' | N9 | C4 | 132.2° | 58.5° |
H2' | C2' | O2' | HO2' | 88.5° | 61.1° |
H2' | C2' | C1' | N9 | 43.4° | 24.2° |
H2' | C2' | C1' | H1' | 74.5° | 146.4° |
C1' | N9 | C8 | C4 | 178.3° | 180.0° |
C1' | N9 | C8 | N7 | 178.3° | 180.0° |
C1' | N9 | C8 | H81 | 53.0° | 60.9° |
C1' | N9 | C8 | H82 | 56.4° | 61.0° |
C1' | N9 | C4 | C5 | 178.6° | 179.7° |
C1' | N9 | C4 | N3 | 0.7° | 0.0° |
H1' | C1' | N9 | C8 | 165.3° | 0.7° |
H1' | C1' | N9 | C4 | 16.6° | 179.3° |
N9 | C8 | N7 | H81 | 125.3° | 119.1° |
N9 | C8 | N7 | H82 | 125.3° | 119.0° |
N9 | C8 | H81 | H82 | 116.5° | 121.9° |
N9 | C8 | N7 | CM7 | 179.2° | 180.0° |
N9 | C8 | N7 | C5 | 0.1° | 0.2° |
C8 | N9 | C4 | C5 | 0.1° | 0.3° |
C8 | N9 | C4 | N3 | 179.2° | 180.0° |
C4 | N9 | C8 | N7 | 0.0° | 0.0° |
C4 | N9 | C8 | H81 | 125.3° | 119.1° |
C4 | N9 | C8 | H82 | 125.2° | 119.0° |
N9 | C4 | C5 | N7 | 0.1° | 0.4° |
N9 | C4 | C5 | C6 | 179.2° | 180.0° |
N9 | C4 | C5 | N3 | 179.3° | 179.8° |
N9 | C4 | N3 | C2 | 178.8° | 179.8° |
N7 | C8 | H81 | H82 | 116.4° | 121.9° |
C8 | N7 | CM7 | C5 | 178.9° | 179.7° |
C8 | N7 | CM7 | HM71 | 179.9° | 179.9° |
C8 | N7 | CM7 | HM72 | 54.7° | 60.1° |
C8 | N7 | CM7 | HM73 | 54.7° | 59.9° |
C8 | N7 | C5 | C6 | 179.1° | 179.9° |
C8 | N7 | C5 | C4 | 0.1° | 0.3° |
H81 | C8 | N7 | CM7 | 55.5° | 60.9° |
H81 | C8 | N7 | C5 | 125.4° | 119.3° |
H82 | C8 | N7 | CM7 | 53.9° | 61.0° |
H82 | C8 | N7 | C5 | 125.2° | 118.8° |
N7 | CM7 | HM71 | HM72 | 125.4° | 120.0° |
N7 | CM7 | HM71 | HM73 | 125.2° | 120.0° |
N7 | CM7 | HM72 | HM73 | 110.2° | 120.0° |
CM7 | N7 | C5 | C6 | 1.8° | 0.3° |
CM7 | N7 | C5 | C4 | 179.3° | 179.9° |
C5 | N7 | CM7 | HM71 | 1.0° | 0.3° |
C5 | N7 | CM7 | HM72 | 126.4° | 119.7° |
C5 | N7 | CM7 | HM73 | 124.2° | 120.3° |
N7 | C5 | C6 | C4 | 178.9° | 179.5° |
N7 | C5 | C6 | O6 | 1.5° | 0.5° |
N7 | C5 | C6 | N1 | 178.7° | 179.5° |
N7 | C5 | C4 | N3 | 179.1° | 179.8° |
HM71 | CM7 | HM72 | HM73 | 110.1° | 120.1° |
C5 | C6 | O6 | N1 | 177.1° | 180.0° |
C5 | C6 | N1 | C2 | 0.2° | 0.0° |
C5 | C6 | N1 | HN1 | 178.0° | 180.0° |
C6 | C5 | C4 | N3 | 0.0° | 0.2° |
C4 | C5 | C6 | O6 | 177.4° | 180.0° |
C4 | C5 | C6 | N1 | 0.2° | 0.0° |
C5 | C4 | N3 | C2 | 0.4° | 0.4° |
O6 | C6 | N1 | C2 | 177.9° | 180.0° |
O6 | C6 | N1 | HN1 | 0.2° | 0.0° |
C6 | N1 | C2 | HN1 | 178.0° | 179.9° |
C6 | N1 | C2 | N2 | 177.2° | 180.0° |
C6 | N1 | C2 | N3 | 0.2° | 0.2° |
N1 | C2 | N2 | N3 | 177.5° | 179.8° |
N1 | C2 | N2 | HN21 | 3.8° | 180.0° |
N1 | C2 | N2 | HN22 | 175.6° | 0.0° |
N1 | C2 | N3 | C4 | 0.4° | 0.4° |
HN1 | N1 | C2 | N2 | 0.8° | 0.0° |
HN1 | N1 | C2 | N3 | 178.2° | 179.8° |
C2 | N2 | HN21 | HN22 | 179.3° | 180.0° |
N2 | C2 | N3 | C4 | 176.9° | 179.8° |
N3 | C2 | N2 | HN21 | 178.7° | 0.2° |
N3 | C2 | N2 | HN22 | 2.0° | 179.8° |