MG7
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
N9 | C8 | sing | 1.36Å | 1.36Å | Aromatic |
N9 | C4 | sing | 1.37Å | 1.38Å | Aromatic |
N9 | C1' | sing | 1.47Å | 1.47Å | |
C8 | N7 | doub | 1.30Å | 1.29Å | Aromatic |
C8 | H8 | sing | 1.08Å | 1.10Å | |
N7 | C5 | sing | 1.36Å | 1.38Å | Aromatic |
N7 | CN7 | sing | 1.46Å | 1.45Å | |
C5 | C6 | sing | 1.41Å | 1.41Å | |
C5 | C4 | doub | 1.40Å | 1.37Å | Aromatic |
C6 | O6 | doub | 1.22Å | 1.22Å | |
C6 | N1 | sing | 1.35Å | 1.38Å | |
N1 | C2 | sing | 1.36Å | 1.38Å | |
N1 | HN1 | sing | 0.97Å | 1.02Å | |
C2 | N2 | sing | 1.37Å | 1.33Å | |
C2 | N3 | doub | 1.31Å | 1.34Å | |
N2 | HN21 | sing | 0.97Å | 1.02Å | |
N2 | HN22 | sing | 0.97Å | 1.02Å | |
N3 | C4 | sing | 1.34Å | 1.36Å | |
O5' | C5' | sing | 1.43Å | 1.44Å | |
O5' | HO5' | sing | 0.97Å | 0.95Å | |
C5' | C4' | sing | 1.53Å | 1.53Å | |
C5' | H5'1 | sing | 1.09Å | 1.12Å | |
C5' | H5'2 | sing | 1.09Å | 1.12Å | |
C4' | O4' | sing | 1.45Å | 1.43Å | |
C4' | C3' | sing | 1.55Å | 1.52Å | |
C4' | H4' | sing | 1.09Å | 1.11Å | |
O4' | C1' | sing | 1.44Å | 1.44Å | |
C1' | C2' | sing | 1.54Å | 1.53Å | |
C1' | H1' | sing | 1.09Å | 1.12Å | |
CN7 | H71 | sing | 1.09Å | 1.12Å | |
CN7 | H72 | sing | 1.09Å | 1.12Å | |
CN7 | H73 | sing | 1.09Å | 1.11Å | |
C2' | O2' | sing | 1.43Å | 1.43Å | |
C2' | C3' | sing | 1.55Å | 1.52Å | |
C2' | H2' | sing | 1.09Å | 1.11Å | |
O2' | HO2' | sing | 0.97Å | 0.95Å | |
C3' | O3' | sing | 1.43Å | 1.44Å | |
C3' | H3' | sing | 1.09Å | 1.11Å | |
O3' | HO3' | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C8 | N9 | C4 | 105.4° | 107.5° |
C8 | N9 | C1' | 127.2° | 126.2° |
N9 | C8 | N7 | 114.3° | 109.8° |
N9 | C8 | H8 | 125.4° | 125.1° |
C4 | N9 | C1' | 127.2° | 126.2° |
N9 | C4 | C5 | 105.5° | 106.1° |
N9 | C4 | N3 | 127.1° | 134.2° |
N9 | C1' | O4' | 106.2° | 110.4° |
N9 | C1' | C2' | 113.4° | 110.4° |
N9 | C1' | H1' | 108.8° | 110.3° |
N7 | C8 | H8 | 120.3° | 125.1° |
C8 | N7 | C5 | 104.0° | 109.3° |
C8 | N7 | CN7 | 124.6° | 125.3° |
C5 | N7 | CN7 | 131.4° | 125.4° |
N7 | C5 | C6 | 129.3° | 134.1° |
N7 | C5 | C4 | 110.8° | 107.3° |
N7 | CN7 | H71 | 124.6° | 109.4° |
N7 | CN7 | H72 | 106.9° | 109.5° |
N7 | CN7 | H73 | 106.9° | 109.5° |
C6 | C5 | C4 | 119.8° | 118.6° |
C5 | C6 | O6 | 127.5° | 120.9° |
C5 | C6 | N1 | 111.9° | 118.3° |
C5 | C4 | N3 | 127.4° | 119.7° |
O6 | C6 | N1 | 120.6° | 120.8° |
C6 | N1 | C2 | 125.9° | 120.3° |
C6 | N1 | HN1 | 116.8° | 119.9° |
C2 | N1 | HN1 | 117.3° | 119.8° |
N1 | C2 | N2 | 117.3° | 119.1° |
N1 | C2 | N3 | 122.1° | 121.9° |
N2 | C2 | N3 | 120.6° | 119.0° |
C2 | N2 | HN21 | 117.3° | 120.0° |
C2 | N2 | HN22 | 109.4° | 120.0° |
C2 | N3 | C4 | 112.9° | 121.2° |
HN21 | N2 | HN22 | 109.4° | 120.0° |
C5' | O5' | HO5' | 114.1° | 106.8° |
O5' | C5' | C4' | 114.1° | 109.5° |
O5' | C5' | H5'1 | 110.6° | 109.5° |
O5' | C5' | H5'2 | 110.5° | 109.5° |
C4' | C5' | H5'1 | 110.5° | 109.5° |
C4' | C5' | H5'2 | 110.5° | 109.5° |
C5' | C4' | O4' | 110.5° | 110.4° |
C5' | C4' | C3' | 111.4° | 110.5° |
C5' | C4' | H4' | 106.0° | 110.3° |
H5'1 | C5' | H5'2 | 99.7° | 109.5° |
O4' | C4' | C3' | 104.7° | 104.8° |
O4' | C4' | H4' | 112.6° | 110.3° |
C4' | O4' | C1' | 106.5° | 105.3° |
C3' | C4' | H4' | 111.8° | 110.4° |
C4' | C3' | C2' | 102.7° | 104.1° |
C4' | C3' | O3' | 110.9° | 110.5° |
C4' | C3' | H3' | 113.3° | 110.5° |
O4' | C1' | C2' | 108.6° | 104.9° |
O4' | C1' | H1' | 113.6° | 110.4° |
C2' | C1' | H1' | 106.5° | 110.3° |
C1' | C2' | O2' | 107.1° | 110.8° |
C1' | C2' | C3' | 102.4° | 104.0° |
C1' | C2' | H2' | 116.5° | 110.5° |
H71 | CN7 | H72 | 106.8° | 109.4° |
H71 | CN7 | H73 | 106.9° | 109.5° |
H72 | CN7 | H73 | 102.8° | 109.5° |
O2' | C2' | C3' | 112.6° | 110.5° |
O2' | C2' | H2' | 107.0° | 110.4° |
C2' | O2' | HO2' | 107.1° | 106.8° |
C3' | C2' | H2' | 111.3° | 110.5° |
C2' | C3' | O3' | 110.5° | 110.5° |
C2' | C3' | H3' | 113.7° | 110.6° |
O3' | C3' | H3' | 105.9° | 110.5° |
C3' | O3' | HO3' | 110.9° | 106.8° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C8 | N9 | C4 | C1' | 175.2° | 179.9° |
N9 | C8 | N7 | H8 | 180.0° | 180.0° |
N9 | C8 | N7 | C5 | 0.5° | 0.3° |
N9 | C8 | N7 | CN7 | 177.9° | 179.9° |
C8 | N9 | C4 | C5 | 0.5° | 0.2° |
C8 | N9 | C4 | N3 | 179.5° | 180.0° |
C8 | N9 | C1' | O4' | 38.9° | 22.0° |
C8 | N9 | C1' | C2' | 80.3° | 93.5° |
C8 | N9 | C1' | H1' | 161.5° | 144.3° |
C4 | N9 | C8 | N7 | 0.6° | 0.0° |
C4 | N9 | C8 | H8 | 179.4° | 180.0° |
N9 | C4 | C5 | N7 | 0.2° | 0.4° |
N9 | C4 | C5 | C6 | 179.7° | 179.7° |
N9 | C4 | C5 | N3 | 180.0° | 179.8° |
N9 | C4 | N3 | C2 | 180.0° | 180.0° |
C4 | N9 | C1' | O4' | 135.3° | 157.9° |
C4 | N9 | C1' | C2' | 105.5° | 86.6° |
C4 | N9 | C1' | H1' | 12.7° | 35.6° |
C1' | N9 | C8 | N7 | 174.6° | 180.0° |
C1' | N9 | C8 | H8 | 5.3° | 0.0° |
C1' | N9 | C4 | C5 | 174.8° | 179.7° |
C1' | N9 | C4 | N3 | 5.3° | 0.0° |
N9 | C1' | O4' | C4' | 138.5° | 159.3° |
N9 | C1' | O4' | C2' | 122.3° | 118.9° |
N9 | C1' | O4' | H1' | 119.5° | 122.3° |
N9 | C1' | C2' | H1' | 119.6° | 122.2° |
N9 | C1' | C2' | O2' | 132.1° | 98.5° |
N9 | C1' | C2' | C3' | 109.3° | 142.7° |
N9 | C1' | C2' | H2' | 12.4° | 24.2° |
C8 | N7 | C5 | CN7 | 178.2° | 179.7° |
C8 | N7 | C5 | C6 | 179.9° | 179.6° |
C8 | N7 | C5 | C4 | 0.1° | 0.4° |
C8 | N7 | CN7 | H71 | 180.0° | 90.1° |
C8 | N7 | CN7 | H72 | 54.8° | 150.0° |
C8 | N7 | CN7 | H73 | 54.7° | 29.9° |
H8 | C8 | N7 | C5 | 179.6° | 179.7° |
H8 | C8 | N7 | CN7 | 2.1° | 0.0° |
N7 | C5 | C6 | C4 | 180.0° | 179.2° |
N7 | C5 | C6 | O6 | 0.5° | 0.6° |
N7 | C5 | C6 | N1 | 179.7° | 179.6° |
N7 | C5 | C4 | N3 | 179.7° | 179.8° |
C5 | N7 | CN7 | H71 | 2.1° | 90.3° |
C5 | N7 | CN7 | H72 | 123.1° | 29.6° |
C5 | N7 | CN7 | H73 | 127.4° | 149.7° |
CN7 | N7 | C5 | C6 | 1.9° | 0.7° |
CN7 | N7 | C5 | C4 | 178.1° | 179.9° |
N7 | CN7 | H71 | H72 | 125.2° | 119.9° |
N7 | CN7 | H71 | H73 | 125.3° | 120.1° |
N7 | CN7 | H72 | H73 | 112.3° | 120.1° |
C5 | C6 | O6 | N1 | 179.8° | 179.8° |
C5 | C6 | N1 | C2 | 0.2° | 0.2° |
C5 | C6 | N1 | HN1 | 179.8° | 179.7° |
C6 | C5 | C4 | N3 | 0.3° | 0.5° |
C4 | C5 | C6 | O6 | 179.5° | 179.8° |
C4 | C5 | C6 | N1 | 0.3° | 0.5° |
C5 | C4 | N3 | C2 | 0.1° | 0.2° |
O6 | C6 | N1 | C2 | 179.6° | 180.0° |
O6 | C6 | N1 | HN1 | 0.3° | 0.1° |
C6 | N1 | C2 | HN1 | 179.9° | 179.9° |
C6 | N1 | C2 | N2 | 179.4° | 180.0° |
C6 | N1 | C2 | N3 | 0.1° | 0.0° |
N1 | C2 | N2 | N3 | 179.5° | 179.9° |
N1 | C2 | N2 | HN21 | 180.0° | 180.0° |
N1 | C2 | N2 | HN22 | 54.7° | 0.1° |
N1 | C2 | N3 | C4 | 0.0° | 0.0° |
HN1 | N1 | C2 | N2 | 0.5° | 0.1° |
HN1 | N1 | C2 | N3 | 180.0° | 180.0° |
C2 | N2 | HN21 | HN22 | 125.3° | 179.9° |
N2 | C2 | N3 | C4 | 179.5° | 180.0° |
N3 | C2 | N2 | HN21 | 0.5° | 0.1° |
N3 | C2 | N2 | HN22 | 125.8° | 180.0° |
O5' | C5' | C4' | H5'1 | 125.3° | 120.0° |
O5' | C5' | C4' | H5'2 | 125.3° | 120.0° |
O5' | C5' | H5'1 | H5'2 | 116.4° | 120.0° |
O5' | C5' | C4' | O4' | 55.6° | 66.4° |
O5' | C5' | C4' | C3' | 60.3° | 178.1° |
O5' | C5' | C4' | H4' | 177.9° | 55.8° |
HO5' | O5' | C5' | C4' | 180.0° | 180.0° |
HO5' | O5' | C5' | H5'1 | 54.8° | 60.0° |
HO5' | O5' | C5' | H5'2 | 54.7° | 60.0° |
C4' | C5' | H5'1 | H5'2 | 116.3° | 120.0° |
C5' | C4' | O4' | C3' | 120.0° | 119.0° |
C5' | C4' | O4' | H4' | 118.4° | 122.2° |
C5' | C4' | C3' | H4' | 118.4° | 122.3° |
C5' | C4' | O4' | C1' | 154.6° | 159.5° |
C5' | C4' | C3' | C2' | 158.9° | 143.0° |
C5' | C4' | C3' | O3' | 83.0° | 98.4° |
C5' | C4' | C3' | H3' | 35.9° | 24.3° |
H5'1 | C5' | C4' | O4' | 179.1° | 173.6° |
H5'1 | C5' | C4' | C3' | 65.1° | 58.1° |
H5'1 | C5' | C4' | H4' | 56.8° | 64.2° |
H5'2 | C5' | C4' | O4' | 69.6° | 53.5° |
H5'2 | C5' | C4' | C3' | 174.5° | 61.9° |
H5'2 | C5' | C4' | H4' | 52.7° | 175.8° |
O4' | C4' | C3' | H4' | 122.2° | 118.8° |
C4' | O4' | C1' | C2' | 16.3° | 40.5° |
C4' | O4' | C1' | H1' | 102.0° | 78.4° |
O4' | C4' | C3' | C2' | 39.5° | 24.1° |
O4' | C4' | C3' | O3' | 157.6° | 142.8° |
O4' | C4' | C3' | H3' | 83.5° | 94.6° |
C3' | C4' | O4' | C1' | 34.6° | 40.5° |
C4' | C3' | C2' | C1' | 28.2° | 0.1° |
C4' | C3' | C2' | O2' | 86.5° | 118.8° |
C4' | C3' | C2' | O3' | 118.3° | 118.7° |
C4' | C3' | C2' | H3' | 122.8° | 118.6° |
C4' | C3' | C2' | H2' | 153.4° | 118.7° |
C4' | C3' | O3' | H3' | 123.3° | 122.6° |
C4' | C3' | O3' | HO3' | 180.0° | 61.4° |
H4' | C4' | O4' | C1' | 87.0° | 78.3° |
H4' | C4' | C3' | C2' | 82.7° | 94.7° |
H4' | C4' | C3' | O3' | 35.4° | 24.0° |
H4' | C4' | C3' | H3' | 154.3° | 146.6° |
O4' | C1' | C2' | H1' | 122.6° | 118.9° |
O4' | C1' | C2' | O2' | 110.2° | 142.6° |
O4' | C1' | C2' | C3' | 8.5° | 23.9° |
O4' | C1' | C2' | H2' | 130.2° | 94.7° |
C1' | C2' | O2' | C3' | 111.8° | 114.7° |
C1' | C2' | O2' | H2' | 125.6° | 122.7° |
C1' | C2' | C3' | H2' | 125.2° | 118.5° |
C1' | C2' | O2' | HO2' | 180.0° | 176.1° |
C1' | C2' | C3' | O3' | 146.5° | 118.8° |
C1' | C2' | C3' | H3' | 94.6° | 118.5° |
H1' | C1' | C2' | O2' | 12.4° | 23.7° |
H1' | C1' | C2' | C3' | 131.1° | 95.1° |
H1' | C1' | C2' | H2' | 107.2° | 146.4° |
H71 | CN7 | H72 | H73 | 112.4° | 120.0° |
O2' | C2' | C3' | H2' | 120.1° | 122.5° |
O2' | C2' | C3' | O3' | 31.8° | 0.2° |
O2' | C2' | C3' | H3' | 150.7° | 122.5° |
C3' | C2' | O2' | HO2' | 68.1° | 61.4° |
C2' | C3' | O3' | H3' | 123.5° | 122.7° |
C2' | C3' | O3' | HO3' | 66.8° | 176.1° |
H2' | C2' | O2' | HO2' | 54.5° | 61.1° |
H2' | C2' | C3' | O3' | 88.3° | 122.7° |
H2' | C2' | C3' | H3' | 30.6° | 0.0° |
H3' | C3' | O3' | HO3' | 56.8° | 61.2° |