MDA

Bonds

First atom	Second atom	Bond order type	Distance (experimental model)	Distance (ideal model)	Properties
C1	C2	sing	1.53Å	1.53Å
C1	O1	sing	1.43Å	1.44Å
C1	O5	sing	1.42Å	1.44Å
C1	H1	sing	1.09Å	1.10Å
C2	C3	sing	1.53Å	1.55Å
C2	H2	sing	1.09Å	1.10Å
C2	H22	sing	1.09Å	1.10Å
C3	C4	sing	1.53Å	1.54Å
C3	C3'	sing	1.53Å	1.55Å
C3	O3	sing	1.43Å	1.42Å
C4	C5	sing	1.53Å	1.54Å
C4	O4	sing	1.43Å	1.42Å
C4	H4	sing	1.09Å	1.10Å
C5	C6	sing	1.53Å	1.56Å
C5	O5	sing	1.43Å	1.44Å
C5	H5	sing	1.09Å	1.10Å
C6	H61	sing	1.09Å	1.10Å
C6	H62	sing	1.09Å	1.10Å
C6	H63	sing	1.09Å	1.10Å
C3'	H3'1	sing	1.09Å	1.10Å
C3'	H3'2	sing	1.09Å	1.10Å
C3'	H3'3	sing	1.09Å	1.10Å
O1	HO1	sing	0.97Å	0.95Å
O3	HO3	sing	0.97Å	0.96Å
O4	HO4	sing	0.97Å	0.96Å

Angles

First atom	Second atom	Third atom	Angle (experimental model)	Angle (ideal model)
C2	C1	O1	109.7°	109.4°
C2	C1	O5	108.5°	109.8°
C2	C1	H1	109.7°	109.4°
C1	C2	C3	112.1°	109.0°
C1	C2	H2	108.5°	109.5°
C1	C2	H22	106.6°	109.5°
O1	C1	O5	112.0°	109.5°
O1	C1	H1	107.2°	109.4°
C1	O1	HO1	109.6°	106.8°
O5	C1	H1	109.7°	109.5°
C1	O5	C5	115.2°	107.6°
C3	C2	H2	108.5°	109.6°
C3	C2	H22	110.0°	109.6°
C2	C3	C4	107.2°	108.7°
C2	C3	C3'	112.2°	109.6°
C2	C3	O3	110.0°	109.6°
H2	C2	H22	111.0°	109.6°
C4	C3	C3'	110.0°	109.6°
C4	C3	O3	107.8°	109.8°
C3	C4	C5	109.1°	109.0°
C3	C4	O4	110.0°	109.6°
C3	C4	H4	110.3°	109.5°
C3'	C3	O3	109.5°	109.6°
C3	C3'	H3'1	110.3°	109.5°
C3	C3'	H3'2	112.2°	109.5°
C3	C3'	H3'3	110.1°	109.4°
C3	O3	HO3	113.0°	106.8°
C5	C4	O4	109.1°	109.6°
C5	C4	H4	110.4°	109.6°
C4	C5	C6	109.4°	109.5°
C4	C5	O5	110.3°	109.8°
C4	C5	H5	107.5°	109.5°
O4	C4	H4	107.9°	109.5°
C4	O4	HO4	109.6°	106.8°
C6	C5	O5	109.1°	109.4°
C6	C5	H5	114.6°	109.4°
C5	C6	H61	112.9°	109.5°
C5	C6	H62	112.6°	109.5°
C5	C6	H63	109.5°	109.5°
O5	C5	H5	105.9°	109.4°
H61	C6	H62	108.4°	109.5°
H61	C6	H63	106.5°	109.4°
H62	C6	H63	106.5°	109.5°
H3'1	C3'	H3'2	107.1°	109.5°
H3'1	C3'	H3'3	108.0°	109.5°
H3'2	C3'	H3'3	109.1°	109.5°

Dihedrals

First atom	Second atom	Third atom	Fourth atom	Torsion (experimental model)	Torsion (ideal model)
C2	C1	O1	O5	120.6°	120.3°
C2	C1	O1	H1	119.1°	119.8°
C2	C1	O5	H1	119.9°	120.1°
C1	C2	C3	H2	119.8°	119.8°
C1	C2	C3	H22	118.5°	119.8°
C1	C2	H2	H22	116.8°	120.2°
C1	C2	C3	C4	57.1°	53.7°
C1	C2	C3	C3'	178.0°	173.5°
C1	C2	C3	O3	59.9°	66.3°
C2	C1	O5	C5	57.6°	67.5°
C2	C1	O1	HO1	180.0°	179.7°
O1	C1	O5	H1	118.9°	119.9°
O1	C1	C2	C3	178.6°	178.6°
O1	C1	C2	H2	58.8°	58.8°
O1	C1	C2	H22	60.9°	61.5°
O1	C1	O5	C5	178.9°	172.4°
O5	C1	C2	C3	55.9°	61.2°
O5	C1	C2	H2	63.9°	178.9°
O5	C1	C2	H22	176.4°	58.6°
C1	O5	C5	C4	60.1°	67.6°
C1	O5	C5	C6	179.8°	172.3°
C1	O5	C5	H5	56.0°	52.5°
O5	C1	O1	HO1	59.4°	60.0°
H1	C1	C2	C3	63.9°	58.9°
H1	C1	C2	H2	176.2°	61.0°
H1	C1	C2	H22	56.6°	178.8°
H1	C1	O5	C5	62.2°	52.5°
H1	C1	O1	HO1	60.9°	59.9°
C3	C2	H2	H22	121.1°	120.3°
C2	C3	C4	C3'	122.2°	119.7°
C2	C3	C4	O3	118.5°	119.9°
C2	C3	C3'	O3	122.4°	120.3°
C2	C3	C4	C5	56.8°	53.8°
C2	C3	C4	O4	176.5°	173.7°
C2	C3	C4	H4	64.6°	66.1°
C2	C3	C3'	H3'1	177.2°	60.0°
C2	C3	C3'	H3'2	63.5°	60.0°
C2	C3	C3'	H3'3	58.1°	180.0°
C2	C3	O3	HO3	74.7°	60.0°
H2	C2	C3	C4	62.7°	173.6°
H2	C2	C3	C3'	58.1°	66.7°
H2	C2	C3	O3	179.7°	53.6°
H22	C2	C3	C4	175.6°	66.1°
H22	C2	C3	C3'	63.5°	53.7°
H22	C2	C3	O3	58.6°	173.9°
C4	C3	C3'	O3	118.3°	120.6°
C3	C4	C5	O4	120.3°	119.9°
C3	C4	C5	H4	121.3°	119.9°
C3	C4	O4	H4	120.3°	120.2°
C3	C4	C5	C6	178.3°	178.6°
C3	C4	C5	O5	58.3°	61.3°
C3	C4	C5	H5	56.7°	58.7°
C4	C3	C3'	H3'1	58.0°	179.1°
C4	C3	C3'	H3'2	177.2°	59.1°
C4	C3	C3'	H3'3	61.1°	60.9°
C4	C3	O3	HO3	168.7°	179.3°
C3	C4	O4	HO4	58.9°	179.9°
C3'	C3	C4	C5	179.0°	173.5°
C3'	C3	C4	O4	61.3°	66.6°
C3'	C3	C4	H4	57.6°	53.6°
C3	C3'	H3'1	H3'2	122.3°	120.0°
C3	C3'	H3'1	H3'3	120.4°	120.0°
C3	C3'	H3'2	H3'3	122.2°	120.0°
C3'	C3	O3	HO3	49.0°	60.3°
O3	C3	C4	C5	61.7°	66.0°
O3	C3	C4	O4	58.0°	53.9°
O3	C3	C4	H4	176.9°	174.0°
O3	C3	C3'	H3'1	60.3°	60.3°
O3	C3	C3'	H3'2	58.9°	179.7°
O3	C3	C3'	H3'3	179.4°	59.7°
C5	C4	O4	H4	120.0°	120.3°
C4	C5	C6	O5	120.7°	120.3°
C4	C5	C6	H5	120.8°	119.9°
C4	C5	O5	H5	116.1°	120.1°
C4	C5	C6	H61	178.6°	179.9°
C4	C5	C6	H62	58.2°	59.8°
C4	C5	C6	H63	60.1°	60.1°
C5	C4	O4	HO4	178.6°	60.3°
O4	C4	C5	C6	61.4°	58.7°
O4	C4	C5	O5	178.6°	178.8°
O4	C4	C5	H5	63.6°	61.2°
H4	C4	C5	C6	57.0°	61.5°
H4	C4	C5	O5	63.0°	58.6°
H4	C4	C5	H5	178.0°	178.6°
H4	C4	O4	HO4	61.4°	59.9°
C6	C5	O5	H5	123.8°	119.8°
C5	C6	H61	H62	125.5°	120.1°
C5	C6	H61	H63	120.2°	120.0°
C5	C6	H62	H63	120.1°	120.0°
O5	C5	C6	H61	57.9°	59.8°
O5	C5	C6	H62	178.9°	179.8°
O5	C5	C6	H63	60.6°	60.2°
H5	C5	C6	H61	60.5°	60.0°
H5	C5	C6	H62	62.6°	60.1°
H5	C5	C6	H63	179.0°	179.9°
H61	C6	H62	H63	114.3°	119.9°
H3'1	C3'	H3'2	H3'3	116.7°	120.0°

Definition date:	1999-07-08
Last modified:	2020-07-17
Release status:	REL
Processing site:	RCSB
Replaces:	DDB
Derived from:	146D