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MD9

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CMBC2Bsing0.00Å1.50Å
CMCC2Csing0.00Å1.50Å
CMAC3Asing0.00Å1.50Å
CMDC2Dsing0.00Å1.50Å
CAACBAsing0.00Å1.52Å
CAAC2Asing0.00Å1.52Å
CBACGAsing0.00Å1.48Å
CGAO1Adoub0.00Å1.26Å
CGAO2Asing0.00Å1.25Å
CADCBDsing0.00Å1.50Å
CADC3Dsing0.00Å1.52Å
CBDCGDsing0.00Å1.49Å
CGDO1Ddoub0.00Å1.25Å
CGDO2Dsing0.00Å1.25Å
C2AC3Adoub0.00Å1.37Å
C2AC1Asing0.00Å1.39Å
C3AC4Asing0.00Å1.39Å
C4ANAdoub0.00Å1.38Å
C4ACHBsing0.00Å1.49Å
NAC1Asing0.00Å1.40Å
NAMGsing0.00Å1.70Å
C1ACHAdoub0.00Å1.50Å
CHBC1Bdoub0.00Å1.47Å
C1BC2Bsing0.00Å1.39Å
C1BNBsing0.00Å1.35Å
C2BC3Bdoub0.00Å1.37Å
C3BC4Bsing0.00Å1.39Å
C4BNBsing0.00Å1.36Å
C4BCHCdoub0.00Å1.45Å
NBMGsing0.00Å2.03Å
CHCC1Csing0.00Å1.44Å
C1CC2Csing0.00Å1.38Å
C1CNCdoub0.00Å1.36Å
C2CC3Cdoub0.00Å1.36Å
C3CC4Csing0.00Å1.38Å
C4CNCsing0.00Å1.38Å
C4CCHDdoub0.00Å1.47Å
NCMGsing0.00Å1.87Å
CHDC1Dsing0.00Å1.48Å
C1DC2Ddoub0.00Å1.40ÅAromatic
C1DNDsing0.00Å1.36ÅAromatic
C2DC3Dsing0.00Å1.36ÅAromatic
C3DC4Ddoub0.00Å1.40ÅAromatic
C4DNDsing0.00Å1.35ÅAromatic
C4DCHAsing0.00Å1.48Å
NDMGsing0.00Å1.95Å
CMBH1sing0.00Å1.10Å
CMBH2sing0.00Å1.10Å
CMBH3sing0.00Å1.10Å
CMCH4sing0.00Å1.10Å
CMCH5sing0.00Å1.10Å
CMCH6sing0.00Å1.10Å
CMAH7sing0.00Å1.10Å
CMAH8sing0.00Å1.10Å
CMAH9sing0.00Å1.10Å
CMDH10sing0.00Å1.10Å
CMDH11sing0.00Å1.10Å
CMDH12sing0.00Å1.10Å
CAAH13sing0.00Å1.10Å
CAAH14sing0.00Å1.10Å
CBAH15sing0.00Å1.10Å
CBAH16sing0.00Å1.10Å
CADH17sing0.00Å1.10Å
CADH18sing0.00Å1.10Å
CBDH19sing0.00Å1.10Å
CBDH20sing0.00Å1.10Å
CHBH21sing0.00Å1.08Å
C3BH22sing0.00Å1.08Å
CHCH23sing0.00Å1.08Å
C3CH24sing0.00Å1.08Å
CHDH25sing0.00Å1.08Å
CHAH26sing0.00Å1.08Å
O2DH27sing0.00Å0.95Å
O2AH28sing0.00Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CMBC2BC1B127.8°90.0°
CMBC2BC3B128.0°90.0°
C2BCMBH1109.5°90.0°
C2BCMBH2109.5°90.0°
C2BCMBH3109.5°90.0°
CMCC2CC1C128.1°90.0°
CMCC2CC3C127.5°90.0°
C2CCMCH4109.5°90.0°
C2CCMCH5109.5°90.0°
C2CCMCH6109.5°90.0°
CMAC3AC2A127.2°90.0°
CMAC3AC4A128.4°90.0°
C3ACMAH7109.5°90.0°
C3ACMAH8109.5°90.0°
C3ACMAH9109.5°90.0°
CMDC2DC1D127.5°90.0°
CMDC2DC3D127.3°90.0°
C2DCMDH10109.5°90.0°
C2DCMDH11109.5°90.0°
C2DCMDH12109.5°90.0°
CBACAAC2A117.2°90.0°
CAACBACGA117.4°90.0°
CBACAAH13107.5°90.0°
CBACAAH14107.5°90.0°
CAACBAH15107.5°90.0°
CAACBAH16107.4°90.0°
CAAC2AC3A126.0°90.0°
CAAC2AC1A128.1°90.0°
C2ACAAH13107.5°90.0°
C2ACAAH14107.5°90.0°
CBACGAO1A119.9°90.0°
CBACGAO2A120.0°90.0°
CGACBAH15107.5°90.0°
CGACBAH16107.5°90.0°
O1ACGAO2A120.1°90.0°
CGAO2AH28109.5°90.0°
CBDCADC3D116.7°90.0°
CADCBDCGD119.1°90.0°
CBDCADH17107.6°90.0°
CBDCADH18107.6°90.0°
CADCBDH19107.0°90.0°
CADCBDH20107.0°90.0°
CADC3DC2D127.3°90.0°
CADC3DC4D127.5°90.0°
C3DCADH17107.6°90.0°
C3DCADH18107.6°90.0°
CBDCGDO1D119.5°90.0°
CBDCGDO2D120.1°90.0°
CGDCBDH19107.0°90.0°
CGDCBDH20107.0°90.0°
O1DCGDO2D120.4°90.0°
CGDO2DH27109.5°90.0°
C3AC2AC1A106.0°90.0°
C2AC3AC4A104.4°90.0°
C2AC1ANA114.9°90.0°
C2AC1ACHA111.8°90.0°
C3AC4ANA116.6°90.0°
C3AC4ACHB113.5°90.0°
NAC4ACHB130.0°90.0°
C4ANAC1A98.2°90.0°
C4ANAMG135.0°90.0°
C4ACHBC1B107.8°90.0°
C4ACHBH21126.1°90.0°
C1ANAMG126.8°90.0°
NAC1ACHA133.3°90.0°
NAMGNB86.7°90.0°
NAMGNC163.6°90.0°
NAMGND94.3°90.0°
C1ACHAC4D109.6°90.0°
C1ACHAH26125.2°90.0°
CHBC1BC2B116.6°90.0°
CHBC1BNB128.7°90.0°
C1BCHBH21126.1°90.0°
C2BC1BNB114.8°90.0°
C1BC2BC3B104.2°90.0°
C1BNBC4B101.4°90.0°
C1BNBMG127.1°90.0°
C2BC3BC4B106.1°90.0°
C2BC3BH22127.0°90.0°
C3BC4BNB113.5°90.0°
C3BC4BCHC116.1°90.0°
C4BC3BH22127.0°90.0°
NBC4BCHC130.4°90.0°
C4BNBMG129.6°90.0°
C4BCHCC1C109.0°90.0°
C4BCHCH23125.5°90.0°
NBMGNC84.0°90.0°
NBMGND157.6°90.0°
CHCC1CC2C112.5°90.0°
CHCC1CNC130.8°90.0°
C1CCHCH23125.5°90.0°
C2CC1CNC116.7°90.0°
C1CC2CC3C104.4°90.0°
C1CNCC4C97.7°90.0°
C1CNCMG135.0°90.0°
C2CC3CC4C105.3°90.0°
C2CC3CH24127.4°90.0°
C3CC4CNC116.0°90.0°
C3CC4CCHD112.0°90.0°
C4CC3CH24127.3°90.0°
NCC4CCHD132.0°90.0°
C4CNCMG127.2°90.0°
C4CCHDC1D109.9°90.0°
C4CCHDH25125.1°90.0°
NCMGND89.3°90.0°
CHDC1DC2D118.0°90.0°
CHDC1DND128.2°90.0°
C1DCHDH25125.0°90.0°
C2DC1DND113.7°90.0°
C1DC2DC3D105.2°90.0°
C1DNDC4D101.9°90.0°
C1DNDMG127.8°90.0°
C2DC3DC4D105.2°90.0°
C3DC4DND114.0°90.0°
C3DC4DCHA119.2°90.0°
NDC4DCHA126.9°90.0°
C4DNDMG127.0°90.0°
C4DCHAH26125.2°90.0°
H1CMBH2109.5°90.0°
H1CMBH3109.5°90.0°
H2CMBH3109.4°90.0°
H4CMCH5109.5°90.0°
H4CMCH6109.4°90.0°
H5CMCH6109.5°90.0°
H7CMAH8109.5°90.0°
H7CMAH9109.5°90.0°
H8CMAH9109.5°90.0°
H10CMDH11109.4°90.0°
H10CMDH12109.5°90.0°
H11CMDH12109.5°90.0°
H13CAAH14109.5°90.0°
H15CBAH16109.5°90.0°
H17CADH18109.5°90.0°
H19CBDH20109.4°90.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CMBC2BC1BCHB0.6°90.0°
CMBC2BC1BC3B179.9°90.0°
CMBC2BC1BNB179.4°90.0°
CMBC2BC3BC4B180.0°90.0°
C2BCMBH1H2120.0°90.0°
C2BCMBH1H3120.0°90.0°
C2BCMBH2H3120.0°90.0°
CMBC2BC3BH220.0°90.0°
CMCC2CC1CCHC0.2°90.0°
CMCC2CC1CC3C179.8°90.0°
CMCC2CC1CNC180.0°90.0°
CMCC2CC3CC4C179.8°90.0°
C2CCMCH4H5120.0°90.0°
C2CCMCH4H6120.0°90.0°
C2CCMCH5H6120.0°90.0°
CMCC2CC3CH240.2°90.0°
CMAC3AC2ACAA0.1°90.0°
CMAC3AC2AC4A179.9°90.0°
CMAC3AC2AC1A179.9°90.0°
CMAC3AC4ANA179.8°90.0°
CMAC3AC4ACHB0.2°90.0°
C3ACMAH7H8120.0°90.0°
C3ACMAH7H9120.0°90.0°
C3ACMAH8H9120.0°90.0°
CMDC2DC3DCAD0.1°90.0°
CMDC2DC1DCHD0.2°90.0°
CMDC2DC1DC3D179.9°90.0°
CMDC2DC1DND179.3°90.0°
CMDC2DC3DC4D179.9°90.0°
C2DCMDH10H11120.0°90.0°
C2DCMDH10H12120.0°90.0°
C2DCMDH11H12120.0°90.0°
CBACAAC2AH13121.1°90.0°
CBACAAC2AH14121.1°90.0°
CAACBACGAH15121.2°90.0°
CAACBACGAH16121.1°90.0°
CAACBACGAO1A47.9°90.0°
CAACBACGAO2A132.0°90.0°
CBACAAC2AC3A89.4°90.0°
CBACAAC2AC1A90.5°90.0°
CBACAAH13H14116.5°90.0°
CAACBAH15H16116.4°90.0°
C2ACAACBACGA78.0°90.0°
CAAC2AC3AC1A179.9°90.0°
CAAC2AC3AC4A179.8°90.0°
CAAC2AC1ANA179.7°90.0°
CAAC2AC1ACHA0.2°90.0°
C2ACAAH13H14116.5°90.0°
C2ACAACBAH15160.8°90.0°
C2ACAACBAH1643.1°90.0°
CBACGAO1AO2A179.9°90.0°
CGACBACAAH13160.9°90.0°
CGACBACAAH1443.1°90.0°
CGACBAH15H16116.4°90.0°
CBACGAO2AH28179.9°90.0°
O1ACGACBAH1573.2°90.0°
O1ACGACBAH16169.1°90.0°
O1ACGAO2AH280.0°90.0°
O2ACGACBAH15106.9°90.0°
O2ACGACBAH1610.8°90.0°
CBDCADC3DH17121.0°90.0°
CBDCADC3DH18121.1°90.0°
CADCBDCGDH19121.4°90.0°
CADCBDCGDH20121.4°90.0°
CADCBDCGDO1D175.6°90.0°
CADCBDCGDO2D4.5°90.0°
CBDCADC3DC2D109.3°90.0°
CBDCADC3DC4D70.5°90.0°
CBDCADH17H18116.7°90.0°
CADCBDH19H20115.7°90.0°
C3DCADCBDCGD145.3°90.0°
CADC3DC2DC1D180.0°90.0°
CADC3DC2DC4D179.8°90.0°
CADC3DC4DND179.3°90.0°
CADC3DC4DCHA0.1°90.0°
C3DCADH17H18116.7°90.0°
C3DCADCBDH1993.4°90.0°
C3DCADCBDH2023.9°90.0°
CBDCGDO1DO2D179.9°90.0°
CGDCBDCADH1793.7°90.0°
CGDCBDCADH1824.2°90.0°
CGDCBDH19H20115.6°90.0°
CBDCGDO2DH27180.0°90.0°
O1DCGDCBDH1963.0°90.0°
O1DCGDCBDH2054.2°90.0°
O1DCGDO2DH270.0°90.0°
O2DCGDCBDH19116.9°90.0°
O2DCGDCBDH20125.9°90.0°
C2AC3AC4ANA0.1°90.0°
C2AC3AC4ACHB179.9°90.0°
C3AC2AC1ANA0.2°90.0°
C3AC2AC1ACHA179.7°90.0°
C2AC3ACMAH7180.0°90.0°
C2AC3ACMAH860.0°90.0°
C2AC3ACMAH960.0°90.0°
C3AC2ACAAH1331.8°90.0°
C3AC2ACAAH14149.5°90.0°
C1AC2AC3AC4A0.0°90.0°
C2AC1ANAC4A0.2°90.0°
C2AC1ANACHA179.4°90.0°
C2AC1ANAMG179.2°90.0°
C2AC1ACHAC4D177.8°90.0°
C1AC2ACAAH13148.4°90.0°
C1AC2ACAAH1430.6°90.0°
C2AC1ACHAH262.2°90.0°
C3AC4ANACHB180.0°90.0°
C3AC4ANAC1A0.2°90.0°
C3AC4ANAMG179.2°90.0°
C3AC4ACHBC1B164.4°90.0°
C4AC3ACMAH70.1°90.0°
C4AC3ACMAH8119.9°90.0°
C4AC3ACMAH9120.1°90.0°
C3AC4ACHBH2115.6°90.0°
C4ANAC1AMG179.4°90.0°
C4ANAC1ACHA179.6°90.0°
NAC4ACHBC1B15.6°90.0°
C4ANAMGNB15.0°90.0°
C4ANAMGNC70.5°90.0°
C4ANAMGND172.6°90.0°
NAC4ACHBH21164.4°90.0°
CHBC4ANAC1A179.9°90.0°
CHBC4ANAMG0.8°90.0°
C4ACHBC1BH21180.0°90.0°
C4ACHBC1BC2B173.3°90.0°
C4ACHBC1BNB6.7°90.0°
C1ANAMGNB164.2°90.0°
C1ANAMGNC108.7°90.0°
NAC1ACHAC4D1.7°90.0°
C1ANAMGND6.6°90.0°
NAC1ACHAH26178.3°90.0°
MGNAC1ACHA0.2°90.0°
NAMGNBC1B21.2°90.0°
NAMGNBC4B177.1°90.0°
NAMGNBNC166.4°90.0°
NAMGNBND93.2°90.0°
NAMGNCC1C58.1°90.0°
NAMGNCC4C116.5°90.0°
NAMGNCND102.8°90.0°
NAMGNDC1D171.6°90.0°
NAMGNDC4D15.9°90.0°
C1ACHAC4DC3D172.1°90.0°
C1ACHAC4DND8.6°90.0°
C1ACHAC4DH26180.0°90.0°
CHBC1BC2BNB180.0°90.0°
CHBC1BC2BC3B179.5°90.0°
CHBC1BNBC4B179.1°90.0°
CHBC1BNBMG13.5°90.0°
C1BC2BC3BC4B0.1°90.0°
C2BC1BNBC4B0.8°90.0°
C2BC1BNBMG166.5°90.0°
C1BC2BCMBH1180.0°90.0°
C1BC2BCMBH260.0°90.0°
C1BC2BCMBH360.0°90.0°
C2BC1BCHBH216.7°90.0°
C1BC2BC3BH22179.9°90.0°
NBC1BC2BC3B0.5°90.0°
C1BNBC4BC3B0.9°90.0°
C1BNBC4BMG165.2°90.0°
C1BNBC4BCHC179.9°90.0°
C1BNBMGNC172.3°90.0°
C1BNBMGND114.4°90.0°
NBC1BCHBH21173.3°90.0°
C2BC3BC4BH22180.0°90.0°
C2BC3BC4BNB0.6°90.0°
C2BC3BC4BCHC180.0°90.0°
C3BC2BCMBH10.1°90.0°
C3BC2BCMBH2120.0°90.0°
C3BC2BCMBH3120.1°90.0°
C3BC4BNBCHC179.2°90.0°
C3BC4BNBMG166.0°90.0°
C3BC4BCHCC1C175.1°90.0°
C3BC4BCHCH234.9°90.0°
NBC4BCHCC1C5.7°90.0°
C4BNBMGNC10.7°90.0°
C4BNBMGND83.9°90.0°
NBC4BC3BH22179.4°90.0°
NBC4BCHCH23174.3°90.0°
CHCC4BNBMG14.7°90.0°
C4BCHCC1CH23180.0°90.0°
C4BCHCC1CC2C175.8°90.0°
C4BCHCC1CNC3.9°90.0°
CHCC4BC3BH220.0°90.0°
NBMGNCC1C2.3°90.0°
NBMGNCC4C172.3°90.0°
NBMGNCND158.6°90.0°
NBMGNDC1D96.7°90.0°
NBMGNDC4D107.6°90.0°
CHCC1CC2CNC179.8°90.0°
CHCC1CC2CC3C179.9°90.0°
CHCC1CNCC4C180.0°90.0°
CHCC1CNCMG4.3°90.0°
C1CC2CC3CC4C0.0°90.0°
C2CC1CNCC4C0.3°90.0°
C2CC1CNCMG175.4°90.0°
C1CC2CCMCH4180.0°90.0°
C1CC2CCMCH560.0°90.0°
C1CC2CCMCH660.0°90.0°
C2CC1CCHCH234.2°90.0°
C1CC2CC3CH24180.0°90.0°
NCC1CC2CC3C0.2°90.0°
C1CNCC4CC3C0.3°90.0°
C1CNCC4CMG176.2°90.0°
C1CNCC4CCHD179.7°90.0°
C1CNCMGND160.9°90.0°
NCC1CCHCH23176.1°90.0°
C2CC3CC4CH24180.0°90.0°
C2CC3CC4CNC0.2°90.0°
C2CC3CC4CCHD179.7°90.0°
C3CC2CCMCH40.2°90.0°
C3CC2CCMCH5120.2°90.0°
C3CC2CCMCH6119.8°90.0°
C3CC4CNCCHD179.4°90.0°
C3CC4CNCMG175.9°90.0°
C3CC4CCHDC1D163.9°90.0°
C3CC4CCHDH2516.1°90.0°
NCC4CCHDC1D15.5°90.0°
C4CNCMGND13.7°90.0°
NCC4CC3CH24179.8°90.0°
NCC4CCHDH25164.5°90.0°
CHDC4CNCMG3.5°90.0°
C4CCHDC1DH25180.0°90.0°
C4CCHDC1DC2D175.8°90.0°
C4CCHDC1DND3.2°90.0°
CHDC4CC3CH240.3°90.0°
NCMGNDC1D24.5°90.0°
NCMGNDC4D179.9°90.0°
CHDC1DC2DND179.1°90.0°
CHDC1DC2DC3D180.0°90.0°
CHDC1DNDC4D179.9°90.0°
CHDC1DNDMG19.6°90.0°
C1DC2DC3DC4D0.2°90.0°
C2DC1DNDC4D1.1°90.0°
C2DC1DNDMG161.4°90.0°
C1DC2DCMDH1089.9°90.0°
C1DC2DCMDH11150.1°90.0°
C1DC2DCMDH1230.1°90.0°
C2DC1DCHDH254.3°90.0°
NDC1DC2DC3D0.9°90.0°
C1DNDC4DC3D1.0°90.0°
C1DNDC4DMG160.6°90.0°
C1DNDC4DCHA179.7°90.0°
NDC1DCHDH25176.8°90.0°
C2DC3DC4DND0.5°90.0°
C2DC3DC4DCHA179.9°90.0°
C3DC2DCMDH1089.9°90.0°
C3DC2DCMDH1130.1°90.0°
C3DC2DCMDH12150.1°90.0°
C2DC3DCADH17129.7°90.0°
C2DC3DCADH1811.8°90.0°
C3DC4DNDCHA179.4°90.0°
C3DC4DNDMG161.5°90.0°
C4DC3DCADH1750.6°90.0°
C4DC3DCADH18168.5°90.0°
C3DC4DCHAH267.9°90.0°
NDC4DCHAH26171.4°90.0°
CHAC4DNDMG19.1°90.0°
H1CMBH2H3120.0°90.0°
H4CMCH5H6120.0°90.0°
H7CMAH8H9120.0°90.0°
H10CMDH11H12120.0°90.0°
H13CAACBAH1539.7°90.0°
H13CAACBAH1678.0°90.0°
H14CAACBAH1578.1°90.0°
H14CAACBAH16164.2°90.0°
H17CADCBDH1927.7°90.0°
H17CADCBDH20144.9°90.0°
H18CADCBDH19145.6°90.0°
H18CADCBDH2097.2°90.0°

222415

PDB entries from 2024-07-10

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