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MCN

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1C2sing1.35Å1.42Å
N1C6sing1.36Å1.35Å
N1C1'sing1.46Å1.47Å
C2N3sing1.33Å1.39Å
C2O2doub1.22Å1.25Å
N3C4doub1.33Å1.32Å
C4C5sing1.41Å1.47Å
C4N4sing1.38Å1.36Å
C5C6doub1.35Å1.37Å
C5H5sing1.08Å1.10Å
C6H6sing1.08Å1.10Å
N4HN41sing0.97Å1.02Å
N4HN42sing0.97Å1.02Å
C1'C2Dsing1.54Å1.55Å
C1'O4Dsing1.45Å1.44Å
C1'H1'sing1.09Å1.11Å
C2DO2'sing1.43Å1.42Å
C2DC3'sing1.55Å1.51Å
C2DH2'sing1.09Å1.12Å
O2'HO2'sing0.97Å0.95Å
C3'C4Dsing1.54Å1.52Å
C3'O3'sing1.43Å1.44Å
C3'H3'sing1.09Å1.12Å
C4DO4Dsing1.44Å1.46Å
C4DC5'sing1.53Å1.50Å
C4DH4'sing1.09Å1.11Å
O3'HO3'sing0.97Å0.95Å
C5'O5'sing1.43Å1.57Å
C5'H5'1sing1.09Å1.12Å
C5'H5'2sing1.09Å1.11Å
O5'PAsing1.61Å1.57Å
PAO1Adoub1.48Å1.51Å
PAO2Asing1.61Å1.58Å
PAO3Asing1.61Å1.62Å
O2AHOA2sing0.97Å0.95Å
O3APBsing1.61Å1.61Å
PBO1Bdoub1.48Å1.45Å
PBO2Bsing1.61Å1.52Å
PBO3Bsing1.61Å1.63Å
O2BHOB2sing0.97Å0.95Å
O3BC10sing1.43Å1.47Å
C10C9'sing1.53Å1.52Å
C10H101sing1.09Å1.11Å
C10H102sing1.09Å1.12Å
C9'C8'sing1.51Å1.47Å
C9'O9'sing1.42Å1.46Å
C9'H9'sing1.09Å1.12Å
C8'S8'sing1.76Å1.68Å
C8'C7'doub1.36Å1.32Å
S8'HS8sing1.41Å0.95Å
C7'S7'sing1.76Å1.69Å
C7'C6'sing1.48Å1.52Å
S7'HS7sing1.34Å0.95Å
C6'C7sing1.42Å1.52ÅAromatic
C6'N5'doub1.32Å1.48ÅAromatic
C7O9'sing1.35Å1.42Å
C7N8'doub1.32Å1.41ÅAromatic
N5'C4Asing1.34Å1.43ÅAromatic
C4AC4Bsing1.42Å1.41ÅAromatic
C4AC4'doub1.41Å1.46ÅAromatic
N8'C4Bsing1.34Å1.34ÅAromatic
C4BN1'doub1.34Å1.36ÅAromatic
N1'C2'sing1.32Å1.41ÅAromatic
C2'N2'sing1.38Å1.35Å
C2'N3'doub1.33Å1.44ÅAromatic
N2'HN21sing0.97Å1.02Å
N2'HN22sing0.97Å1.02Å
N3'C4'sing1.32Å1.36ÅAromatic
C4'O4'sing1.35Å1.28Å
O4'HO4sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N1C6121.7°120.3°
C2N1C1'117.3°119.9°
N1C2N3116.3°121.1°
N1C2O2121.7°119.4°
C6N1C1'120.9°119.8°
N1C6C5122.9°119.2°
N1C6H6118.0°120.4°
N1C1'C2D112.5°110.4°
N1C1'O4D108.1°110.3°
N1C1'H1'106.6°110.4°
N3C2O2121.9°119.5°
C2N3C4122.5°120.7°
N3C4C5121.7°119.6°
N3C4N4124.4°120.2°
C5C4N4113.9°120.2°
C4C5C6114.8°119.0°
C4C5H5125.8°120.4°
C4N4HN41124.5°120.0°
C4N4HN42106.9°119.9°
C6C5H5119.4°120.5°
C5C6H6119.1°120.4°
HN41N4HN42106.9°120.0°
C2DC1'O4D103.5°104.9°
C2DC1'H1'111.0°110.4°
C1'C2DO2'110.7°110.8°
C1'C2DC3'103.3°104.0°
C1'C2DH2'113.6°110.4°
O4DC1'H1'115.2°110.3°
C1'O4DC4D110.1°105.2°
O2'C2DC3'112.0°110.5°
O2'C2DH2'105.1°110.4°
C2DO2'HO2'110.7°106.8°
C3'C2DH2'112.4°110.5°
C2DC3'C4D102.9°104.1°
C2DC3'O3'109.7°110.5°
C2DC3'H3'112.6°110.6°
C4DC3'O3'106.5°110.5°
C4DC3'H3'115.5°110.6°
C3'C4DO4D107.1°104.8°
C3'C4DC5'112.0°110.4°
C3'C4DH4'109.9°110.4°
O3'C3'H3'109.4°110.4°
C3'O3'HO3'109.7°106.8°
O4DC4DC5'110.8°110.3°
O4DC4DH4'111.1°110.4°
C5'C4DH4'106.1°110.3°
C4DC5'O5'108.1°109.5°
C4DC5'H5'1112.8°109.5°
C4DC5'H5'2112.8°109.5°
O5'C5'H5'1112.7°109.4°
O5'C5'H5'2112.7°109.5°
C5'O5'PA120.6°106.9°
H5'1C5'H5'297.7°109.5°
O5'PAO1A109.9°109.4°
O5'PAO2A108.3°109.5°
O5'PAO3A106.6°109.5°
O1APAO2A114.2°109.4°
O1APAO3A105.5°109.5°
O2APAO3A112.1°109.5°
PAO2AHOA2108.3°106.8°
PAO3APB132.7°106.8°
O3APBO1B112.5°109.5°
O3APBO2B105.0°109.5°
O3APBO3B97.6°109.5°
O1BPBO2B122.0°109.4°
O1BPBO3B105.6°109.5°
O2BPBO3B111.5°109.5°
PBO2BHOB2105.0°106.8°
PBO3BC10119.2°106.8°
O3BC10C9'111.9°109.5°
O3BC10H101111.3°109.4°
O3BC10H102111.3°109.5°
C9'C10H101111.4°109.4°
C9'C10H102111.3°109.5°
C10C9'C8'105.1°109.1°
C10C9'O9'110.0°109.2°
C10C9'H9'113.4°109.1°
H101C10H10299.0°109.5°
C8'C9'O9'113.5°111.3°
C8'C9'H9'110.0°109.1°
C9'C8'S8'113.8°120.9°
C9'C8'C7'121.6°118.1°
O9'C9'H9'105.0°109.1°
C9'O9'C7113.8°109.8°
S8'C8'C7'124.5°121.0°
C8'S8'HS8113.8°100.0°
C8'C7'S7'125.3°122.2°
C8'C7'C6'124.4°115.6°
S7'C7'C6'110.0°122.2°
C7'S7'HS7125.3°100.0°
C7'C6'C7108.3°118.0°
C7'C6'N5'110.3°120.9°
C7C6'N5'107.1°121.1°
C6'C7O9'114.3°120.2°
C6'C7N8'118.9°119.8°
C6'N5'C4A113.7°119.3°
O9'C7N8'108.4°120.0°
C7N8'C4B114.2°119.8°
N5'C4AC4B120.2°120.0°
N5'C4AC4'122.4°121.7°
C4BC4AC4'117.4°118.4°
C4AC4BN8'124.6°120.1°
C4AC4BN1'121.3°118.6°
C4AC4'N3'120.8°118.5°
C4AC4'O4'121.8°120.7°
N8'C4BN1'114.1°121.3°
C4BN1'C2'121.9°120.6°
N1'C2'N2'124.2°118.7°
N1'C2'N3'117.7°122.7°
N2'C2'N3'118.1°118.6°
C2'N2'HN21124.2°120.0°
C2'N2'HN22107.0°119.9°
C2'N3'C4'120.9°121.3°
HN21N2'HN22107.1°120.1°
N3'C4'O4'117.4°120.8°
C4'O4'HO4121.8°106.8°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N1C6C1'179.7°180.0°
N1C2N3O2180.0°180.0°
N1C2N3C40.1°0.0°
C2N1C6C50.0°0.3°
C2N1C6H6180.0°180.0°
C2N1C1'C2D115.5°58.4°
C2N1C1'O4D130.9°57.1°
C2N1C1'H1'6.4°179.3°
C6N1C2N30.0°0.0°
C6N1C2O2180.0°180.0°
N1C6C5C40.1°0.6°
N1C6C5H6180.0°179.6°
N1C6C5H5180.0°180.0°
C6N1C1'C2D64.8°121.5°
C6N1C1'O4D48.9°123.0°
C6N1C1'H1'173.3°0.8°
C1'N1C2N3179.8°180.0°
C1'N1C2O20.2°0.0°
C1'N1C6C5179.8°179.7°
C1'N1C6H60.3°0.1°
N1C1'C2DO4D116.4°118.9°
N1C1'C2DH1'119.4°122.3°
N1C1'O4DH1'119.1°122.2°
N1C1'C2DO2'88.5°98.5°
N1C1'C2DC3'151.5°142.7°
N1C1'C2DH2'29.5°24.1°
N1C1'O4DC4D141.8°159.4°
C2N3C4C50.2°0.3°
C2N3C4N4179.8°179.9°
O2C2N3C4179.9°180.0°
N3C4C5N4180.0°179.7°
N3C4C5C60.2°0.6°
N3C4C5H5179.9°180.0°
N3C4N4HN41180.0°0.0°
N3C4N4HN4254.7°179.7°
C4C5C6H5179.9°179.4°
C4C5C6H6179.9°179.8°
C5C4N4HN410.0°179.7°
C5C4N4HN42125.3°0.6°
N4C4C5C6179.8°179.8°
N4C4C5H50.1°0.4°
C4N4HN41HN42125.3°179.7°
H5C5C6H60.1°0.4°
C2DC1'O4DH1'121.4°118.9°
C1'C2DO2'C3'114.7°114.7°
C1'C2DO2'H2'123.0°122.7°
C1'C2DC3'H2'122.8°118.5°
C1'C2DO2'HO2'179.9°176.2°
C1'C2DC3'C4D33.9°0.2°
C1'C2DC3'O3'79.1°118.8°
C1'C2DC3'H3'158.9°118.6°
C2DC1'O4DC4D22.3°40.5°
O4DC1'C2DO2'155.0°142.6°
O4DC1'C2DC3'35.0°23.8°
O4DC1'C2DH2'87.0°94.7°
C1'O4DC4DC3'1.0°40.5°
C1'O4DC4DC5'123.4°159.4°
C1'O4DC4DH4'119.0°78.3°
H1'C1'C2DO2'30.8°23.8°
H1'C1'C2DC3'89.2°95.0°
H1'C1'C2DH2'148.8°146.5°
H1'C1'O4DC4D99.1°78.4°
O2'C2DC3'H2'118.1°122.5°
O2'C2DC3'C4D153.1°118.8°
O2'C2DC3'O3'40.1°0.2°
O2'C2DC3'H3'82.0°122.4°
C3'C2DO2'HO2'65.4°61.4°
C2DC3'C4DO3'115.3°118.7°
C2DC3'C4DH3'123.1°118.8°
C2DC3'O3'H3'123.9°122.7°
C2DC3'C4DO4D21.3°24.1°
C2DC3'C4DC5'100.4°143.0°
C2DC3'C4DH4'142.0°94.8°
C2DC3'O3'HO3'180.0°65.3°
H2'C2DO2'HO2'56.9°61.2°
H2'C2DC3'C4D88.9°118.7°
H2'C2DC3'O3'158.1°122.7°
H2'C2DC3'H3'36.1°0.1°
C4DC3'O3'H3'125.4°122.7°
C3'C4DO4DC5'122.4°118.9°
C3'C4DO4DH4'120.0°118.9°
C3'C4DC5'H4'119.8°122.3°
C4DC3'O3'HO3'69.4°180.0°
C3'C4DC5'O5'46.1°176.9°
C3'C4DC5'H5'1171.3°63.1°
C3'C4DC5'H5'279.1°56.9°
O3'C3'C4DO4D94.1°142.8°
O3'C3'C4DC5'144.2°98.4°
O3'C3'C4DH4'26.7°23.9°
H3'C3'C4DO4D144.3°94.7°
H3'C3'C4DC5'22.6°24.2°
H3'C3'C4DH4'95.0°146.4°
H3'C3'O3'HO3'56.0°57.4°
O4DC4DC5'H4'120.7°122.3°
O4DC4DC5'O5'73.4°61.5°
O4DC4DC5'H5'151.8°178.6°
O4DC4DC5'H5'2161.4°58.5°
C4DC5'O5'H5'1125.3°120.0°
C4DC5'O5'H5'2125.3°120.0°
C4DC5'H5'1H5'2118.7°120.0°
C4DC5'O5'PA178.6°180.0°
H4'C4DC5'O5'165.9°60.8°
H4'C4DC5'H5'168.8°59.1°
H4'C4DC5'H5'240.7°179.2°
O5'C5'H5'1H5'2118.6°120.0°
C5'O5'PAO1A63.5°59.9°
C5'O5'PAO2A171.1°60.0°
C5'O5'PAO3A50.3°180.0°
H5'1C5'O5'PA53.3°60.0°
H5'2C5'O5'PA56.1°60.0°
O5'PAO1AO2A121.9°119.9°
O5'PAO1AO3A114.6°120.1°
O5'PAO2AO3A117.3°120.1°
O5'PAO2AHOA2180.0°60.1°
O5'PAO3APB66.8°180.0°
O1APAO2AO3A119.9°120.0°
O1APAO2AHOA257.3°180.0°
O1APAO3APB176.4°60.0°
O2APAO3APB51.5°60.0°
O3APAO2AHOA262.7°60.0°
PAO3APBO1B32.8°60.0°
PAO3APBO2B102.1°60.0°
PAO3APBO3B143.2°180.0°
O3APBO1BO2B126.2°120.0°
O3APBO1BO3B105.3°120.0°
O3APBO2BO3B104.6°120.0°
O3APBO2BHOB2180.0°60.0°
O3APBO3BC1080.7°180.0°
O1BPBO2BO3B125.9°119.9°
O1BPBO2BHOB250.5°180.0°
O1BPBO3BC10163.3°60.0°
O2BPBO3BC1028.8°60.0°
O3BPBO2BHOB275.4°60.0°
PBO3BC10C9'115.6°180.0°
PBO3BC10H101119.1°60.0°
PBO3BC10H1029.7°60.0°
O3BC10C9'H101125.2°119.9°
O3BC10C9'H102125.2°120.0°
O3BC10H101H102117.2°120.0°
O3BC10C9'C8'172.4°179.1°
O3BC10C9'O9'49.9°59.1°
O3BC10C9'H9'67.4°60.0°
C9'C10H101H102117.2°120.0°
C10C9'C8'O9'120.2°120.5°
C10C9'C8'H9'122.4°119.1°
C10C9'O9'H9'122.4°119.1°
C10C9'C8'S8'54.4°99.1°
C10C9'C8'C7'127.0°80.9°
C10C9'O9'C7157.1°61.2°
H101C10C9'C8'47.2°60.9°
H101C10C9'O9'75.4°60.9°
H101C10C9'H9'167.3°180.0°
H102C10C9'C8'62.3°59.1°
H102C10C9'O9'175.1°179.1°
H102C10C9'H9'57.8°60.0°
C8'C9'O9'H9'120.2°120.4°
C9'C8'S8'C7'178.5°180.0°
C9'C8'S8'HS8180.0°179.9°
C9'C8'C7'S7'179.5°179.7°
C9'C8'C7'C6'7.4°0.2°
C8'C9'O9'C739.8°59.3°
O9'C9'C8'S8'174.6°140.3°
O9'C9'C8'C7'6.8°39.6°
C9'O9'C7C6'59.5°41.7°
C9'O9'C7N8'165.3°138.6°
H9'C9'C8'S8'68.0°19.9°
H9'C9'C8'C7'110.5°160.1°
H9'C9'O9'C780.4°179.7°
S8'C8'C7'S7'2.1°0.3°
S8'C8'C7'C6'171.0°179.7°
C7'C8'S8'HS81.5°0.1°
C8'C7'S7'C6'173.9°179.9°
C8'C7'S7'HS7180.0°180.0°
C8'C7'C6'C79.6°19.3°
C8'C7'C6'N5'107.3°160.0°
S7'C7'C6'C7164.4°160.7°
S7'C7'C6'N5'78.7°19.9°
C6'C7'S7'HS76.1°0.1°
C7'C6'C7N5'119.0°179.3°
C7'C6'C7O9'42.2°2.1°
C7'C6'C7N8'172.3°178.2°
C7'C6'N5'C4A162.4°178.5°
C6'C7O9'N8'135.2°179.7°
C7C6'N5'C4A44.7°0.8°
C6'C7N8'C4B32.0°0.6°
N5'C6'C7O9'76.7°178.6°
N5'C6'C7N8'53.4°1.1°
C6'N5'C4AC4B21.2°0.1°
C6'N5'C4AC4'157.1°179.9°
O9'C7N8'C4B100.7°179.1°
C7N8'C4BC4A2.3°0.2°
C7N8'C4BN1'175.3°179.9°
N5'C4AC4BC4'178.4°179.9°
N5'C4AC4BN8'2.8°0.5°
N5'C4AC4BN1'179.8°179.7°
N5'C4AC4'N3'179.6°179.7°
N5'C4AC4'O4'0.9°0.2°
C4AC4BN8'N1'177.6°179.9°
C4AC4BN1'C2'0.6°0.2°
C4BC4AC4'N3'2.1°0.2°
C4BC4AC4'O4'179.2°179.8°
C4'C4AC4BN8'178.8°179.6°
C4'C4AC4BN1'1.4°0.3°
C4AC4'N3'C2'1.9°0.0°
C4AC4'N3'O4'178.8°180.0°
C4AC4'O4'HO4180.0°89.9°
N8'C4BN1'C2'178.3°179.7°
C4BN1'C2'N2'179.6°179.9°
C4BN1'C2'N3'0.3°0.0°
N1'C2'N2'N3'179.2°180.0°
N1'C2'N2'HN21180.0°180.0°
N1'C2'N2'HN2254.7°0.1°
N1'C2'N3'C4'1.0°0.1°
C2'N2'HN21HN22125.2°179.9°
N2'C2'N3'C4'179.7°179.9°
N3'C2'N2'HN210.8°0.0°
N3'C2'N2'HN22124.5°180.0°
C2'N3'C4'O4'179.3°180.0°
N3'C4'O4'HO41.3°90.0°

222415

PDB entries from 2024-07-10

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