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MBD

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
CA1OA1sing1.36Å1.38Å
CA1CA2doub1.39Å1.36ÅAromatic
CA1CA6sing1.38Å1.40ÅAromatic
OA1HA1sing0.97Å0.95Å
CA2OA2sing1.36Å1.37Å
CA2CA3sing1.38Å1.37ÅAromatic
OA2HA2sing0.97Å0.95Å
CA3CB3sing1.51Å1.48Å
CA3CA4doub1.38Å1.39ÅAromatic
CB3HB31sing1.09Å1.11Å
CB3HB32sing1.09Å1.11Å
CB3HB33sing1.09Å1.11Å
CA4CA5sing1.38Å1.38ÅAromatic
CA4HA4sing1.08Å1.10Å
CA5CA6doub1.38Å1.38ÅAromatic
CA5HA5sing1.08Å1.10Å
CA6HA6sing1.08Å1.10Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
OA1CA1CA2119.2°120.0°
OA1CA1CA6120.7°120.1°
CA1OA1HA1119.2°106.8°
CA2CA1CA6120.1°119.9°
CA1CA2OA2119.5°120.1°
CA1CA2CA3120.5°119.9°
CA1CA6CA5119.7°120.0°
CA1CA6HA6120.7°120.0°
OA2CA2CA3120.0°120.0°
CA2OA2HA2119.5°106.8°
CA2CA3CB3118.3°120.1°
CA2CA3CA4120.2°120.0°
CB3CA3CA4121.5°119.9°
CA3CB3HB31118.2°109.5°
CA3CB3HB32109.0°109.4°
CA3CB3HB33109.0°109.5°
CA3CA4CA5119.6°120.2°
CA3CA4HA4120.6°120.0°
HB31CB3HB32109.1°109.4°
HB31CB3HB33109.1°109.5°
HB32CB3HB33101.1°109.5°
CA5CA4HA4119.8°119.9°
CA4CA5CA6119.9°120.1°
CA4CA5HA5120.0°120.0°
CA6CA5HA5120.1°119.9°
CA5CA6HA6119.6°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
OA1CA1CA2CA6179.7°179.8°
OA1CA1CA2OA20.2°0.2°
OA1CA1CA2CA3179.6°179.7°
OA1CA1CA6CA5179.3°179.9°
OA1CA1CA6HA60.7°0.0°
CA2CA1OA1HA1180.0°89.8°
CA1CA2OA2CA3179.4°179.6°
CA1CA2OA2HA2180.0°90.0°
CA1CA2CA3CB3180.0°179.8°
CA1CA2CA3CA40.4°0.4°
CA2CA1CA6CA51.0°0.3°
CA2CA1CA6HA6179.0°179.8°
CA6CA1OA1HA10.3°90.0°
CA6CA1CA2OA2179.9°180.0°
CA6CA1CA2CA30.7°0.5°
CA1CA6CA5CA40.9°0.0°
CA1CA6CA5HA6180.0°179.9°
CA1CA6CA5HA5179.1°180.0°
OA2CA2CA3CB30.6°0.3°
OA2CA2CA3CA4179.8°180.0°
CA3CA2OA2HA20.6°90.5°
CA2CA3CB3CA4179.6°179.8°
CA2CA3CB3HB31180.0°90.2°
CA2CA3CB3HB3254.8°29.6°
CA2CA3CB3HB3354.7°149.7°
CA2CA3CA4CA50.3°0.2°
CA2CA3CA4HA4179.8°179.7°
CA3CB3HB31HB32125.2°119.9°
CA3CB3HB31HB33125.2°120.1°
CA3CB3HB32HB33114.7°120.1°
CB3CA3CA4CA5179.9°180.0°
CB3CA3CA4HA40.1°0.0°
CA4CA3CB3HB310.4°90.0°
CA4CA3CB3HB32125.6°150.1°
CA4CA3CB3HB33124.9°30.0°
CA3CA4CA5HA4180.0°179.9°
CA3CA4CA5CA60.5°0.0°
CA3CA4CA5HA5179.5°180.0°
HB31CB3HB32HB33114.9°120.0°
CA4CA5CA6HA5180.0°180.0°
CA4CA5CA6HA6179.1°179.9°
HA4CA4CA5CA6179.5°179.9°
HA4CA4CA5HA50.5°0.1°
HA5CA5CA6HA60.9°0.1°

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PDB entries from 2024-07-24

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